mRNA_D-mesarthrocarpus_Contig973.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig973.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig973.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI00106BE0C6 (protein ALP1-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BE0C6)

HSP 1 Score: 110 bits (276), Expect = 4.890e-26
Identity = 61/167 (36.53%), Postives = 95/167 (56.89%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQDYAKW-DTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGTLRP CRP  N  Q   +SG  R HG+KFQ VV P+G+I+  +GP AG  H  +++  S+L  KL D    +P Q +  + D AY +   + + ++   A ++ +Q   NK  S   + VE T   +   + FLD K+N K++ +P+G  +++G +L N  TC
Sbjct:  175 FIDGTLRPCCRPIRN--QRILFSGHKRVHGLKFQSVVCPNGLISNLYGPIAGKHHDAFMLHESKLLPKLEDLF--RPPQIFTLYGDPAYPLRPHLLAPYR--GAAVTRDQQSFNKSMSKLRVSVEWTFGKLVQYFAFLDFKKNLKVLLQPIGMYYVVGAILINCHTC 335          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI00148A9295 (uncharacterized protein LOC117689971 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A9295)

HSP 1 Score: 110 bits (275), Expect = 5.510e-26
Identity = 65/167 (38.92%), Postives = 89/167 (53.29%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQDYAKW-DTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGT+RP CRP  N  Q   Y+G  R HG+KFQ ++ P+GIIA F+GP  G  H   L+R S +   +         + Y  + D AY +   +   FK   A LS NQ+  NK  S   I VE     + NL+ FLD+K+N KL  +P+G  + +  LL N  TC
Sbjct:  159 FIDGTVRPICRPAHN--QRIVYNGHKRVHGLKFQSIMAPNGIIAHFYGPVEGRRHDAGLLRESGVEIDMHRHMTTPNNEVYCVYGDPAYPLTPYIIPPFK--GAVLSANQARFNKRMSSVRICVEWGFGKLLNLFAFLDYKKNHKLYLQPIGKYYKVAALLANCHTC 321          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI001458B43B (protein ALP1-like n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI001458B43B)

HSP 1 Score: 108 bits (270), Expect = 3.310e-25
Identity = 64/168 (38.10%), Postives = 95/168 (56.55%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQD-YAKW-DTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGT+RP CRP  +  Q   Y+G  R H +K+Q VV P+G++   +GP  G  H   ++R S+L  ++R      PT D YA + D AY +   + + ++     +S NQ+  NK  S   I VE T   +  L+ FLD+K+N KL  +PVG  +L+G LLTN  +C
Sbjct:  167 FIDGTVRPVCRPTHH--QKLIYNGHKRVHALKYQSVVTPNGLVVNMFGPIEGKRHDAGMLRESQLQQQMRQYMT-TPTGDMYAVYGDPAYPLTPYIITPYR--GGVVSANQALFNKKMSAVRICVEWTFGKILALFSFLDYKKNLKLYLQPVGKYYLVGTLLTNCHSC 329          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI0018D706F7 (uncharacterized protein LOC119735770 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D706F7)

HSP 1 Score: 107 bits (267), Expect = 9.650e-25
Identity = 65/170 (38.24%), Postives = 91/170 (53.53%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQ----EGKPTQDYAKWDTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGT+RP CRP  N  Q   Y+G  R H +K+Q V+LPSGIIA  +GP  G  H   L+R S L D+L+        G P   Y   D AY + + ++  FK   A ++  Q   N+  S     VE     + +LW FLD K+N KL+ +P+   +++G L TN  TC
Sbjct:  172 FIDGTVRPMCRPTHN--QRVCYNGHKRVHSLKYQSVMLPSGIIANMYGPVEGRRHDCALLRMSGLLDQLQARPLYNVNGNPFSLYG--DPAYPIHNNLQGPFK--GAHITAMQQLYNQRMSSVRECVEWGFGKMLSLWAFLDFKKNLKLLLQPIAKYYIIGALFTNCHTC 335          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI001CF13703 (uncharacterized protein LOC114973976 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF13703)

HSP 1 Score: 105 bits (262), Expect = 1.050e-24
Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQDYAKW-DTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGTLRP CRP  N  Q   +SG  R HGIKFQ VV P+G+IA  +GP AG  H  +L+  S L   LR  ++  P   +  + D AY +   +   ++   AGL+  Q + N + S     VE     +   + FLD  +N K++ +P+G  +++G L TN  TC
Sbjct:   81 FIDGTLRPCCRPIRN--QRILFSGHKRVHGIKFQSVVCPNGLIAHLYGPIAGRHHDAFLLYESNLLPALR--RKFPPPNIFTLYGDPAYPIRQHILGPYR--GAGLTPLQEQFNGNMSKLRESVEWGFGKIVQYFAFLDFSKNLKILLQPIGKYYVIGALFTNCHTC 241          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI00077A0F01 (uncharacterized protein LOC107341469 n=2 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A0F01)

HSP 1 Score: 104 bits (260), Expect = 1.420e-24
Identity = 66/169 (39.05%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCH-GGYLMRGSRLNDKLRD--AQEGKPTQDYAKWDTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGT+RP C+P  N  Q A Y+G  R H IKFQ VV P+G+IA  +GP  G  H  G L     LND  R   A +G P   Y   D AY +   ++  FK   A L+  +   NK  S   + VE     + N + FLD K+N K+   PVG ++++  LL N  TC
Sbjct:   62 FIDGTVRPLCKPGQN--QRALYNGHKRVHSIKFQSVVAPNGLIANLYGPVEGKRHDSGLLADSGLLNDLSRYSFAPDGTPLCIYG--DPAYPLRVHLQGPFK--GAALTPLEQHFNKSMSQVRVAVEWVFGDITNYFAFLDFKKNLKIGLSPVGKMYIVCSLLRNAHTC 224          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI00077AB6ED (uncharacterized protein LOC107339985 isoform X1 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AB6ED)

HSP 1 Score: 104 bits (260), Expect = 1.000e-23
Identity = 66/169 (39.05%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCH-GGYLMRGSRLNDKLRD--AQEGKPTQDYAKWDTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGT+RP C+P  N  Q A Y+G  R H IKFQ VV P+G+IA  +GP  G  H  G L     LND  R   A +G P   Y   D AY +   ++  FK   A L+  +   NK  S   + VE     + N + FLD K+N K+   PVG ++++  LL N  TC
Sbjct:  174 FIDGTVRPLCKPGQN--QRALYNGHKRVHSIKFQSVVAPNGLIANLYGPVEGKRHDSGLLADSGLLNDLSRYSFAPDGTPLCIYG--DPAYPLRVHLQGPFK--GAALTPLEQHFNKSMSQVRVAVEWVFGDITNYFAFLDFKKNLKIGLSPVGKMYIVCSLLRNAHTC 336          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI00160537E2 (protein ALP1-like n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI00160537E2)

HSP 1 Score: 103 bits (258), Expect = 1.530e-23
Identity = 68/166 (40.96%), Postives = 84/166 (50.60%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQDYAKWDTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            FVDGTLRP CRP     Q   YSG  R HGIKFQ VV P+GII    GP  G  H  Y++  + L  +L    E    Q     D AY + S + S +K   A L   Q   N   S     VE       +L+ FLD+++N KL  +PVG L+L+GVLL N   C
Sbjct:  159 FVDGTLRPMCRP--GRDQRELYSGHKRIHGIKFQSVVFPNGIIGNLRGPYPGRRHDCYMLSDTGLLPQL----ERMMPQYCLYGDPAYPLRSTLISPYK--GAHLCPGQQSFNTAMSTVRQCVEWEFGKTISLFAFLDYRKNMKLYLQPVGKLYLVGVLLKNCHAC 316          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: A0A8J2KCH9_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2KCH9_9HEXA)

HSP 1 Score: 101 bits (251), Expect = 2.200e-23
Identity = 56/167 (33.53%), Postives = 89/167 (53.29%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQDYAKW-DTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            F+DGT RP CRP     Q   YSG  + H +K+QG++LP+G++A   GP  G  H   ++  S++  ++ +         ++ + D+ YA    VK GFK +A  LS  Q + N D S   + VE     +  L+ FLD K+N KL+ + +   +++G +L N  TC
Sbjct:   46 FIDGTCRPICRP--KKQQELYYSGYYKEHLVKYQGLMLPNGLLARVDGPYIGKRHDSAIIHSSKIISEMEEIFVNADGTWFSLYGDSGYANQKFVKVGFKNRAK-LSDAQKKFNTDMSALRVSVEYGFGKIIQLFAFLDFKKNQKLLMQDIKKQYIVGGILANCHTC 209          
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Match: UPI0013901192 (uncharacterized protein LOC116601645 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013901192)

HSP 1 Score: 99.0 bits (245), Expect = 8.880e-23
Identity = 60/167 (35.93%), Postives = 86/167 (51.50%), Query Frame = 1
Query:    1 FVDGTLRPHCRPDGNMTQAATYSG*NRSHGIKFQGVVLPSGIIAVFWGPTAGCCHGGYLMRGSRLNDKLRDAQEGKPTQDYAKW-DTAYAVMSLVKSGFKLKAAGLSHNQSEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVLLTNIRTC 498
            FVDGT+RP  RP  N  Q   Y+G  R HGIKFQ V LP+G++A  +GPT G  H   ++R SRL  +L+        Q    + D AY +   ++  F+     L+    E NK  S   + VE     + + + F+D K+N K+    VG +H++  LL N  TC
Sbjct:   19 FVDGTVRPVSRPGTN--QRLLYNGHKRVHGIKFQSVALPNGLVAHLFGPTEGRKHDASMLRESRLLTQLQHNAVSPTGQAMCIYGDPAYPIRVHLQCPFRNGI--LTPQLKEFNKSMSEVRVSVEWLFEDIIHYFKFMDFKKNLKVGLSSVGKMHIVSALLRNALTC 181          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig973.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00106BE0C64.890e-2636.53protein ALP1-like isoform X1 n=2 Tax=Dendronephthy... [more]
UPI00148A92955.510e-2638.92uncharacterized protein LOC117689971 n=1 Tax=Crass... [more]
UPI001458B43B3.310e-2538.10protein ALP1-like n=2 Tax=Pecten maximus TaxID=657... [more]
UPI0018D706F79.650e-2538.24uncharacterized protein LOC119735770 n=1 Tax=Patir... [more]
UPI001CF137031.050e-2437.13uncharacterized protein LOC114973976 n=1 Tax=Acrop... [more]
UPI00077A0F011.420e-2439.05uncharacterized protein LOC107341469 n=2 Tax=Acrop... [more]
UPI00077AB6ED1.000e-2339.05uncharacterized protein LOC107339985 isoform X1 n=... [more]
UPI00160537E21.530e-2340.96protein ALP1-like n=1 Tax=Folsomia candida TaxID=1... [more]
A0A8J2KCH9_9HEXA2.200e-2333.53Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
UPI00139011928.880e-2335.93uncharacterized protein LOC116601645 n=1 Tax=Nemat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig973contigD-mesarthrocarpus_Contig973:18468..18968 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog115417.EPrPW00000022484
Model size501
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.68e-07
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,1MJJ5@121069|Pythiales
DescriptionKLTH0B05038p. Source PGD
Cds size324
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791125.833752-CDS-D-mesarthrocarpus_Contig973:18467..187911680791125.833752-CDS-D-mesarthrocarpus_Contig973:18467..18791Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig973 18468..18791 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791125.8457997-UTR-D-mesarthrocarpus_Contig973:18791..189681680791125.8457997-UTR-D-mesarthrocarpus_Contig973:18791..18968Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig973 18792..18968 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig973.3.1prot_D-mesarthrocarpus_Contig973.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig973 18468..18791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig973.3.1

>prot_D-mesarthrocarpus_Contig973.3.1 ID=prot_D-mesarthrocarpus_Contig973.3.1|Name=mRNA_D-mesarthrocarpus_Contig973.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=108bp
MRGSRLNDKLRDAQEGKPTQDYAKWDTAYAVMSLVKSGFKLKAAGLSHNQ
SEGNKDKSVCGIGVENTLRIVCNLWGFLDHKRNSKLVRKPVGDLHLLGVL
LTNIRTC*
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mRNA from alignment at D-mesarthrocarpus_Contig973:18468..18968-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig973.3.1 ID=mRNA_D-mesarthrocarpus_Contig973.3.1|Name=mRNA_D-mesarthrocarpus_Contig973.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=501bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig973:18468..18968- (Discosporangium mesarthrocarpum MT17_79)
TTTGTTGATGGCACCCTTAGACCTCATTGTAGACCAGATGGCAATATGAC ACAGGCGGCTACTTACTCAGGGTAGAATAGAAGCCATGGCATCAAGTTCC AAGGGGTGGTGCTGCCCAGTGGCATCATCGCCGTTTTTTGGGGTCCTACA GCCGGGTGTTGTCATGGTGGCTACCTCATGCGTGGGAGTAGACTGAATGA CAAACTGAGAGATGCCCAAGAGGGCAAACCTACCCAGGACTATGCTAAAT GGGACACTGCCTACGCAGTCATGTCCCTTGTGAAGAGTGGTTTCAAGCTT AAGGCAGCTGGGCTCAGCCACAATCAATCGGAGGGAAACAAAGACAAGAG TGTGTGTGGGATAGGTGTGGAAAACACGCTTAGAATAGTGTGCAACCTCT GGGGATTCCTTGATCACAAGAGGAACTCAAAACTCGTGCGGAAGCCTGTA GGCGACCTCCACCTATTGGGAGTGCTCTTGACTAACATTCGCACTTGCTA G
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig973:18468..18968-

>mRNA_D-mesarthrocarpus_Contig973.3.1 ID=mRNA_D-mesarthrocarpus_Contig973.3.1|Name=mRNA_D-mesarthrocarpus_Contig973.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=324bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig973:18468..18968- (Discosporangium mesarthrocarpum MT17_79)
ATGCGTGGGAGTAGACTGAATGACAAACTGAGAGATGCCCAAGAGGGCAA
ACCTACCCAGGACTATGCTAAATGGGACACTGCCTACGCAGTCATGTCCC
TTGTGAAGAGTGGTTTCAAGCTTAAGGCAGCTGGGCTCAGCCACAATCAA
TCGGAGGGAAACAAAGACAAGAGTGTGTGTGGGATAGGTGTGGAAAACAC
GCTTAGAATAGTGTGCAACCTCTGGGGATTCCTTGATCACAAGAGGAACT
CAAAACTCGTGCGGAAGCCTGTAGGCGACCTCCACCTATTGGGAGTGCTC
TTGACTAACATTCGCACTTGCTAG
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