mRNA_D-mesarthrocarpus_Contig972.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: D8LDL2_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDL2_ECTSI) HSP 1 Score: 227 bits (579), Expect = 2.090e-69 Identity = 106/139 (76.26%), Postives = 121/139 (87.05%), Query Frame = 1
Query: 19 RLISSSRKACHGDHEENYAHAETVNVTWQNAKGDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
R ISS+ +ACHGDHEE + HA+TV +TW+N G TT AKCGMNLMRVA +HGI+LEGACEGVCACSTCH+I+ EV+D L E SEDEEDMLD AFGLTETSRLGCQVIVTP+MDGI+++LPAATRNFYVDGHVPQPH
Sbjct: 62 RGISSTARACHGDHEEGFEHAQTVQITWENKDGLKKTT-AKCGMNLMRVAHKHGIDLEGACEGVCACSTCHVIMSNEVFDQLPEASEDEEDMLDLAFGLTETSRLGCQVIVTPEMDGIVVKLPAATRNFYVDGHVPQPH 199
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A836C6V2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6V2_9STRA) HSP 1 Score: 207 bits (528), Expect = 5.520e-62 Identity = 98/143 (68.53%), Postives = 113/143 (79.02%), Query Frame = 1
Query: 7 VGASRLISSSRKACHGDHEENYAHAETVNVTWQNAKGDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
R ISS+R A HGD E +A+A V + W+N G+ T +A GMNLMRVA +H IELEGACEGVCACSTCH+ILE ++Y L EPSEDEEDMLDQAFGLT TSRLGCQV+VTP+MDGI + LPAATRNFYVDGHVP+PH
Sbjct: 43 AATQRCISSTRTARHGDESE-FANAPNVTINWRNKHGEVRTVDAPVGMNLMRVAHKHDIELEGACEGVCACSTCHVILEDDIYAALPEPSEDEEDMLDQAFGLTATSRLGCQVVVTPEMDGITVTLPAATRNFYVDGHVPKPH 184
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A4D9D0M2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0M2_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.450e-48 Identity = 78/138 (56.52%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 22 LISSSRKACHGDHEENYAHAETVNVTWQNAKGDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
L ++ + HG ++ +A +N+ W KG+ TT+ G +++ A RH +ELEGACEGVCACSTCH+ILE V++ LE+PSE+EEDMLDQAFGLT TSRLGCQV ++ DM+G+ I+LP+ATRNFY+DGHVP+PH
Sbjct: 34 LFHATARVAHGSGKD-LKNAPRINLHWIGKKGEEFTTDGIVGESILEAAHRHEVELEGACEGVCACSTCHVILEEPVFESLEDPSEEEEDMLDQAFGLTPTSRLGCQVELSQDMNGLKIKLPSATRNFYIDGHVPKPH 170
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A7R9YEK4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEK4_9STRA) HSP 1 Score: 169 bits (429), Expect = 3.630e-47 Identity = 88/168 (52.38%), Postives = 107/168 (63.69%), Query Frame = 1
Query: 1 FKVGASRLISSSRKACHGDHEENYAHAETVNVTWQNAKGDTVTTEAKCGMNLMRVAQRHGIELEGACEG-----------------------VCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
+ +R +R HG E + TV + W++ G TEA GM+L++VA R GIELEGACEG VCACSTCH+IL+ +VYDGL+E SE+EEDMLDQAFGLT TSRLGCQV V MDG++++LPAATRNFYVDGHVPQPH
Sbjct: 26 LQPAGARAFHRARALAHGGAE--FLGNATVKLRWRDKSGVDTETEAHVGMSLLQVAHRQGIELEGACEGGLGAVEAAFQRALRRTSWRFALGVCACSTCHVILQADVYDGLDEASEEEEDMLDQAFGLTPTSRLGCQVRVDESMDGMVVQLPAATRNFYVDGHVPQPH 191
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A6U3SGD3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SGD3_9STRA) HSP 1 Score: 165 bits (418), Expect = 8.500e-46 Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 85 TVNVTWQNAK---GDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
TVN+T+ + K T T +A+ G +L++ A RH I+LEGACEGVCACSTCH+IL +V+D L E SEDEEDMLD AFGL+ TSRLGCQVIVT +M+G+ + LPAATRNFYVDGHVPQPH
Sbjct: 53 TVNITFHDPKLADTPTKTVKARVGESLLQTAHRHHIDLEGACEGVCACSTCHVILSDDVFDSLPEASEDEEDMLDMAFGLSATSRLGCQVIVTDEMEGMEVNLPAATRNFYVDGHVPQPH 172
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A6T5LJJ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LJJ2_HETAK) HSP 1 Score: 162 bits (411), Expect = 8.350e-45 Identity = 85/139 (61.15%), Postives = 102/139 (73.38%), Query Frame = 1
Query: 19 RLISSSRKACHGDHEENYAHAETVNVTWQNAKGDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
R ISSS HG + + A V++ +++ KG T +A+ GMN+MRVA + IELEGACEGV ACSTCH++LEG ++D L SE+EEDMLDQA GLT TSRLGCQV VT DM+G I LPA TRNFYVDGHVPQPH
Sbjct: 32 RGISSSFPHFHGHDDHDVATNPLVSLHFKSKKG-MQTVKARVGMNVMRVAHANNIELEGACEGVIACSTCHVVLEGALFDRLAAASEEEEDMLDQAPGLTPTSRLGCQVEVTEDMEGATITLPAITRNFYVDGHVPQPH 169
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A7S3JZW0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZW0_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.310e-44 Identity = 81/134 (60.45%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 37 RKACHGDHEENYAHAETVNVTWQNAK-GDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
RK H + A+AE V + W K G+ + T AK G N++R+AQR+ I LEGACEGV ACSTCH I E E+YD EE SE EEDMLDQAFGLT TSRL CQ+ V DG I LP ATRNFYVDGHVP+PH
Sbjct: 25 RKFSHSXXXAHLANAEDVQINWLLKKTGERIITRAKVGENVLRLAQRYDIPLEGACEGVAACSTCHCIFENELYDSFEEASEKEEDMLDQAFGLTVTSRLACQLTVEKHFDGTTISLPEATRNFYVDGHVPKPH 158
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A7S2S618_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S618_9STRA) HSP 1 Score: 160 bits (406), Expect = 5.000e-44 Identity = 76/127 (59.84%), Postives = 99/127 (77.95%), Query Frame = 1
Query: 79 AETVNVTWQN--------AKGDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
A +V++T++N ++ DTVT +A+ G +++ AQR+ I+LEGACEGVCACSTCHII+ V+D + E E+EEDMLD AFGLT TSRLGCQ+ VT DMDG+ I++P+ATRNFYVDGHVPQPH
Sbjct: 46 APSVSITFKNPHPSSASSSRDDTVTVKARVGETMLQTAQRNHIDLEGACEGVCACSTCHIIIPDNVFDSMPEACEEEEDMLDMAFGLTATSRLGCQMSVTEDMDGMTIQVPSATRNFYVDGHVPQPH 172
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A1E7F1S8_9STRA (Ferredoxin (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F1S8_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.030e-43 Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 82 ETVNVTWQNAKGDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEG-EVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
E V++++ +A G +L++VAQR+ IELEGACEGVCACSTCHII ++YD LEEPSEDEEDMLD AFGLTETSRLGCQV+V MDGI I +P ATRNFYVDGHVP+PH
Sbjct: 1 ECVHISFVLGDSTKKIVDAYVGESLLQVAQRNDIELEGACEGVCACSTCHIIFSSYDLYDSLEEPSEDEEDMLDMAFGLTETSRLGCQVLVDSKMDGIDIEVPKATRNFYVDGHVPKPH 119
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Match: A0A7S2W496_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W496_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.220e-43 Identity = 77/122 (63.11%), Postives = 91/122 (74.59%), Query Frame = 1
Query: 73 AHAETVNVTWQNAK-GDTVTTEAKCGMNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLDQAFGLTETSRLGCQVIVTPDMDGIMIRLPAATRNFYVDGHVPQPH 435
A A+ V + W + K G TT ++ G +L+ A R GI+LEGACEG ACSTCH++L EV+DGL E SE+EEDMLDQAFGLTETSRLGCQV++TP M I LP ATRNFYVDGHVP PH
Sbjct: 36 ASADLVTLRWAHKKTGQVHTTHSRVGDSLLEAAHRSGIDLEGACEGSVACSTCHVVLAPEVFDGLPEASEEEEDMLDQAFGLTETSRLGCQVVITPGMHETTIELPVATRNFYVDGHVPTPH 157 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig972.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig972.5.1 >prot_D-mesarthrocarpus_Contig972.5.1 ID=prot_D-mesarthrocarpus_Contig972.5.1|Name=mRNA_D-mesarthrocarpus_Contig972.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=97bp MNLMRVAQRHGIELEGACEGVCACSTCHIILEGEVYDGLEEPSEDEEDMLback to top mRNA from alignment at D-mesarthrocarpus_Contig972:11711..14810- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig972.5.1 ID=mRNA_D-mesarthrocarpus_Contig972.5.1|Name=mRNA_D-mesarthrocarpus_Contig972.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3100bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig972:11711..14810- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig972:11711..14810- >mRNA_D-mesarthrocarpus_Contig972.5.1 ID=mRNA_D-mesarthrocarpus_Contig972.5.1|Name=mRNA_D-mesarthrocarpus_Contig972.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=291bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig972:11711..14810- (Discosporangium mesarthrocarpum MT17_79)back to top |