mRNA_D-mesarthrocarpus_Contig9708.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9708.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9708.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: UPI000C6E518D (protein ALP1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E518D)

HSP 1 Score: 64.7 bits (156), Expect = 1.120e-10
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYE-IPPSME 180
            FGK   +++FLD K++LKL   PVG LY+VGALL N HTC YG  AT  Y+  +PP ++
Sbjct:  330 FGKIIQIFAFLDFKKNLKLFLQPVGKLYIVGALLTNCHTCLYG-SATSDYFNCLPPKLD 387          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: UPI001CF3474D (uncharacterized protein LOC114950185 isoform X3 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3474D)

HSP 1 Score: 60.8 bits (146), Expect = 5.690e-10
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEI-PPSME 180
            FGK    +++LD +R+LK+   PV   YLVGALLIN HTC YG   T +Y+++ PPS+E
Sbjct:  105 FGKILQYFTYLDFQRNLKVLLQPVAKYYLVGALLINCHTCLYG-SLTGTYFDLEPPSLE 162          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: UPI000C6E5BCA (protein ALP1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E5BCA)

HSP 1 Score: 62.4 bits (150), Expect = 7.150e-10
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYE-IPPSME 180
            FGK    ++FLD K++LKL   PVG LY+VGALL N HTC YG  AT  Y+  +PP ++
Sbjct:  297 FGKIIQKFAFLDLKKNLKLFLQPVGKLYIVGALLTNCHTCLYG-SATSDYFNCLPPKLD 354          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: UPI000C6D5E74 (protein ALP1-like isoform X1 n=3 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D5E74)

HSP 1 Score: 60.1 bits (144), Expect = 4.760e-9
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYE-IPPSME 180
            FGK    + FLD K++ KL   PVG LY+VGALL N HTC YG  AT  Y+  +PP ++
Sbjct:  299 FGKIVQTFPFLDLKKNCKLFLQPVGKLYIVGALLTNCHTCLYG-SATSDYFNCLPPKLD 356          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: UPI00106BE0C6 (protein ALP1-like isoform X1 n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BE0C6)

HSP 1 Score: 59.7 bits (143), Expect = 6.480e-9
Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEIPPSME 180
            FGK    ++FLD K++LK+   P+G  Y+VGA+LIN HTC YG   ++ +   PP ++
Sbjct:  296 FGKLVQYFAFLDFKKNLKVLLQPIGMYYVVGAILINCHTCLYGSTTSRFFNLAPPDLQ 353          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: A0A6S7K9Z3_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K9Z3_PARCT)

HSP 1 Score: 58.5 bits (140), Expect = 1.410e-8
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEI-PPSME 180
            FGK    +++LD KR+LK+   P+G  Y+VGALLIN HTC Y    T  Y+ + PPS+E
Sbjct:  224 FGKITQYFAYLDFKRNLKVLLQPIGKYYMVGALLINCHTCLYD-SVTGVYFGLGPPSLE 281          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 58.5 bits (140), Expect = 1.710e-8
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEIPPSME 180
            +GK    ++FLD  ++LK+   PVG +Y+VGA+L N HTC YG Q    +   PPS+E
Sbjct:  329 YGKIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLE 386          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: G5AGE3_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AGE3_PHYSP)

HSP 1 Score: 54.3 bits (129), Expect = 3.200e-8
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 1
Query:   25 LWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEI-PPSME 180
            LW+++D K+ LK+R NPVG    V  LL N HTC Y      SY+E  PPS++
Sbjct:   22 LWAYVDFKKGLKVRLNPVGKFVRVAMLLTNCHTCYYEGNQISSYFEFKPPSLQ 74          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: A0A6G0VRD5_APHCR (Protein ALP1-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VRD5_APHCR)

HSP 1 Score: 53.9 bits (128), Expect = 1.340e-7
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEIPPSME 180
            FGK    ++FLD +++ KL    VG +Y VG +L N HTC YG Q    +  +PP++E
Sbjct:   67 FGKVIIEFAFLDFRKNQKLLLQHVGQMYKVGVILTNCHTCLYGSQTGTYFNIVPPTLE 124          
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Match: J9L3S5_ACYPI (DDE Tnp4 domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9L3S5_ACYPI)

HSP 1 Score: 54.3 bits (129), Expect = 4.990e-7
Identity = 24/58 (41.38%), Postives = 36/58 (62.07%), Query Frame = 1
Query:    7 FGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQSYYEIPPSME 180
            FGK    ++FLD +++ KL    VG +Y VG +L N HTC YG Q+   +  +PP++E
Sbjct:  242 FGKVIIEFAFLDFRKNQKLLLQHVGQMYKVGVILTNCHTCLYGSQSGTYFNIVPPTLE 299          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9708.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
UPI000C6E518D1.120e-1052.54protein ALP1-like n=1 Tax=Centruroides sculpturatu... [more]
UPI001CF3474D5.690e-1050.85uncharacterized protein LOC114950185 isoform X3 n=... [more]
UPI000C6E5BCA7.150e-1052.54protein ALP1-like n=1 Tax=Centruroides sculpturatu... [more]
UPI000C6D5E744.760e-950.85protein ALP1-like isoform X1 n=3 Tax=Centruroides ... [more]
UPI00106BE0C66.480e-943.10protein ALP1-like isoform X1 n=2 Tax=Dendronephthy... [more]
A0A6S7K9Z3_PARCT1.410e-849.15DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
UPI00077A71E61.710e-844.83uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
G5AGE3_PHYSP3.200e-847.17Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6G0VRD5_APHCR1.340e-741.38Protein ALP1-like (Fragment) n=1 Tax=Aphis cracciv... [more]
J9L3S5_ACYPI4.990e-741.38DDE Tnp4 domain-containing protein n=1 Tax=Acyrtho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9708contigD-mesarthrocarpus_Contig9708:731..916 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog4792.ETI51478
PFAMsDDE_Tnp_4
Model size186
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.35e-08
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size186
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791124.0917754-CDS-D-mesarthrocarpus_Contig9708:730..9161680791124.0917754-CDS-D-mesarthrocarpus_Contig9708:730..916Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9708 731..916 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9708.1.1prot_D-mesarthrocarpus_Contig9708.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9708 731..916 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9708.1.1

>prot_D-mesarthrocarpus_Contig9708.1.1 ID=prot_D-mesarthrocarpus_Contig9708.1.1|Name=mRNA_D-mesarthrocarpus_Contig9708.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=62bp
HAFGKACDLWSFLDHKRHLKLRQNPVGDLYLVGALLINIHTCKYGRQATQ
SYYEIPPSMEA*
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mRNA from alignment at D-mesarthrocarpus_Contig9708:731..916-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9708.1.1 ID=mRNA_D-mesarthrocarpus_Contig9708.1.1|Name=mRNA_D-mesarthrocarpus_Contig9708.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=186bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9708:731..916- (Discosporangium mesarthrocarpum MT17_79)
CACGCATTCGGAAAAGCGTGCGACCTCTGGAGTTTCTTAGATCACAAGAG GCATTTGAAACTGCGGCAGAACCCCGTAGGTGACCTTTACTTGGTGGGAG CACTCTTGATAAACATTCACACGTGTAAGTATGGTCGCCAAGCAACACAG TCCTACTATGAGATCCCTCCCTCCATGGAGGCCTAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9708:731..916-

>mRNA_D-mesarthrocarpus_Contig9708.1.1 ID=mRNA_D-mesarthrocarpus_Contig9708.1.1|Name=mRNA_D-mesarthrocarpus_Contig9708.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=186bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9708:731..916- (Discosporangium mesarthrocarpum MT17_79)
CACGCATTCGGAAAAGCGTGCGACCTCTGGAGTTTCTTAGATCACAAGAG
GCATTTGAAACTGCGGCAGAACCCCGTAGGTGACCTTTACTTGGTGGGAG
CACTCTTGATAAACATTCACACGTGTAAGTATGGTCGCCAAGCAACACAG
TCCTACTATGAGATCCCTCCCTCCATGGAGGCCTAA
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