mRNA_D-mesarthrocarpus_Contig9704.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9704.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9704.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9704.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9704contigD-mesarthrocarpus_Contig9704:974..3368 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size876
Hectar predicted targeting categoryother localisation
Exons4
Cds size873
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791123.8526871-CDS-D-mesarthrocarpus_Contig9704:975..14011680791123.8526871-CDS-D-mesarthrocarpus_Contig9704:975..1401Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9704 976..1401 -
1680791123.8671455-CDS-D-mesarthrocarpus_Contig9704:1844..20791680791123.8671455-CDS-D-mesarthrocarpus_Contig9704:1844..2079Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9704 1845..2079 -
1680791123.8820019-CDS-D-mesarthrocarpus_Contig9704:2415..24811680791123.8820019-CDS-D-mesarthrocarpus_Contig9704:2415..2481Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9704 2416..2481 -
1680791123.9041376-CDS-D-mesarthrocarpus_Contig9704:3222..33681680791123.9041376-CDS-D-mesarthrocarpus_Contig9704:3222..3368Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9704 3223..3368 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9704.2.1prot_D-mesarthrocarpus_Contig9704.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9704 976..3368 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9704.2.1

>prot_D-mesarthrocarpus_Contig9704.2.1 ID=prot_D-mesarthrocarpus_Contig9704.2.1|Name=mRNA_D-mesarthrocarpus_Contig9704.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=291bp
QGQGREGEGGDRDEANRDDGDPAPTTDKGLGLGLGNPRHAEGLRRVAMRW
SDTLKRLEASHNATRKAIRLSLQYQAQAQQIPLHNSRPRSLQNSSNTSQE
CFRVFQEGSGALQDGPGALQDGSGVSDRRPAESGRKGGRVLTERGATLRE
MVEEYRHQGLLNAGPSTYDQTKKLTIGLGLALGFSRPDTRPPDTAAQSSA
QGATGPLRPETTRGSLGAAVGGGGPELDSGTTPQSSWVPRAIVRGPEAAQ
AEGDAAINRAPSPGTAQGFAGGVGPAEDNAGGGGDSAPALG
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mRNA from alignment at D-mesarthrocarpus_Contig9704:974..3368-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9704.2.1 ID=mRNA_D-mesarthrocarpus_Contig9704.2.1|Name=mRNA_D-mesarthrocarpus_Contig9704.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2395bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9704:974..3368- (Discosporangium mesarthrocarpum MT17_79)
CAGGGGCAGGGGCGGGAGGGTGAAGGCGGTGATCGTGATGAAGCCAACAG
AGATGATGGAGACCCCGCTCCCACAACCGATAAAGGTTTAGGGTTGGGGT
TGGGGAATCCCAGGCATGCTGAGGGTCTGAGGAGGGTGGCAATGCGGTGA
GATGTGCGCATTGATAACTCTATAGTGTTTAGTCATAAAGTACTCCACGT
TTACTTCTGGAGTAGAGTTGAGGTTAGGTTTATGGTCTGAGGAGTGATGA
TACTGCGAAACACCAGCATTTGATAGGACTCTATATGCACCCCACAATTC
CTTCTGAAGTAGGATTGGGGTTAGGGCTAGGGTCAGGGCTGGAATAAAGG
TCAGAATAATTGTCTTACTTGCTTCGAAGCAGTGGTTTACAGAGTGCCAA
GTGGAGAGATGTATCCTAAGAATGGCCTGGGGTTGGGGTTAGGGTTTAGG
AGGTATACACTAGAAGTAAGCATACTTCTAGTGTATAATTCAATTAGTCT
GCTGGGAGGACTTACAGGAGTGCCAAGTGTAGAAATGTATATTTCATGGC
CTTGAGGTAGGATTAGGGGTAGTCCTGTGTGCGTGAGATGGTTTCGGTAG
TGCCAAGGGTTAGGGTTAGGGTTAGGGATAAGGCCAGGGCTGTGTATCCC
AAGTGCTTGCATTGACACTTCAAAGCACATGGTCTAGCGTAGATGCTGCG
TGTGGAAAAAAGAGGAACAGAAAGAAAGGAAGAAGCAGAAAAGAAGAGGG
TGGAAGATGGAAAAAGAGAAGGATAAGGTTAAAAGAATAGAACCCTTAAC
ATTGTCTGTGTTACCTTCTTGGGTGTAGATGCAGGTGGAGTGAAACCTTG
GCCCTAACCCAAACCCGAACCCAAACCCGAACCCTAGGTGGAGTGACACG
CTGAAAAGGTTGGAAGCCTCCCACAACGCCACCCGTAAGGCCATCAGACT
CAGGTACTGTGCATACTACTGCACATACCAGTGCGGTAACGCTTCATTTT
CCCCAACTTTGTAGGCACATTTACATACATAAAACAGGTATAGAGTGCAT
GACTCTCAACCCTGACTTGTGGTGTCAAGAGCGTCCATAATTTCACCTAA
CCCCAACCCTAAGCCTAACCCTTGGCAGCAGCATTCTCTTGTTTTGGAAA
AGAGCCTGCTTACTGGTATCTTCCATCCCACCACCCCATGATGCCTATAT
TATTTTTACAAACCTTGCTCTACCCACCCCCAACCCTAACCCTACCCCTA
CCCCTAACCCCCTCTCCCCCCTGGCAATACCACTGTCAGCCTTCAGTACC
AAGCACAGGCTCAGCAGATACCACTGCATAACTCAAGGCCCAGGTCGTTG
CAGAATAGCTCTAATACATCCCAAGAGTGCTTTCGAGTATTCCAGGAGGG
ATCTGGAGCATTGCAAGATGGCCCTGGAGCATTGCAAGATGGCTCTGGAG
TATCAGACAGGCGGCCTGCTGAGAGTGGCAGGAAGGGGGGGAGGGTCCTT
ACGGAAAGGGGCGCAACACTGAGGGTGAGAAAATCCTAACCCTAACCCTA
CCCTTAACTCATACCCTTCTGACCTTACACCCTTAAGCTTTACCTAAGCT
TAGGGTTAAGGGGTTGTGTGATGCTGTGCAAGGGGGTATGGAGGACGAGG
GGGAATGGTGTGGCTGTGATCCCGATCACCTGGAGTGAACGGGGAACCCC
TCCCCCGAACCGTGAACCTAACTCCCACCCTAACCCTAACCCTAACCCTA
ACCCTAACCCTGAGATCACTCAATTTAATCTCCTCTGCCCCCCCCCCACC
AATCCCCCTCATCCCCTTTCTGTGGCACTCTGTGGCACTCTGTGATACTC
TGTGGCACTCCTCGGTACTGTGTGGCACTCTGTGATACTCTGTGGCATTC
CGCGGTAACCTGTGGCACTCCGTGGCGTTTTTTTTGCACTCTGCGGAACA
ACCCCAACGACGAGCAGGAGATGGTGGAGGAGTACCGGCACCAGGGGCTC
CTCAACGCCGGACCATCCACCTACGACCAGACGAAGAAGTTGACTATAGG
GTTAGGGTTAGCGTTAGGTTTCTCCAGACCCGACACCCGACCGCCCGACA
CTGCTGCCCAGAGCTCCGCCCAGGGTGCCACAGGCCCCCTTCGCCCGGAG
ACCACCAGGGGATCCCTGGGAGCAGCTGTCGGGGGTGGGGGACCAGAACT
TGACTCTGGGACCACCCCGCAATCCTCCTGGGTGCCCAGAGCCATTGTAA
GGGGCCCTGAAGCAGCTCAGGCTGAGGGTGATGCCGCCATCAACAGGGCA
CCCAGCCCTGGGACAGCACAGGGGTTTGCAGGAGGCGTGGGTCCAGCAGA
GGACAATGCCGGCGGAGGAGGGGACTCAGCGCCAGCTTTAGGGTC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9704:974..3368-

>mRNA_D-mesarthrocarpus_Contig9704.2.1 ID=mRNA_D-mesarthrocarpus_Contig9704.2.1|Name=mRNA_D-mesarthrocarpus_Contig9704.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=873bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9704:974..3368- (Discosporangium mesarthrocarpum MT17_79)
CAGGGGCAGGGGCGGGAGGGTGAAGGCGGTGATCGTGATGAAGCCAACAG
AGATGATGGAGACCCCGCTCCCACAACCGATAAAGGTTTAGGGTTGGGGT
TGGGGAATCCCAGGCATGCTGAGGGTCTGAGGAGGGTGGCAATGCGGTGG
AGTGACACGCTGAAAAGGTTGGAAGCCTCCCACAACGCCACCCGTAAGGC
CATCAGACTCAGCCTTCAGTACCAAGCACAGGCTCAGCAGATACCACTGC
ATAACTCAAGGCCCAGGTCGTTGCAGAATAGCTCTAATACATCCCAAGAG
TGCTTTCGAGTATTCCAGGAGGGATCTGGAGCATTGCAAGATGGCCCTGG
AGCATTGCAAGATGGCTCTGGAGTATCAGACAGGCGGCCTGCTGAGAGTG
GCAGGAAGGGGGGGAGGGTCCTTACGGAAAGGGGCGCAACACTGAGGGAG
ATGGTGGAGGAGTACCGGCACCAGGGGCTCCTCAACGCCGGACCATCCAC
CTACGACCAGACGAAGAAGTTGACTATAGGGTTAGGGTTAGCGTTAGGTT
TCTCCAGACCCGACACCCGACCGCCCGACACTGCTGCCCAGAGCTCCGCC
CAGGGTGCCACAGGCCCCCTTCGCCCGGAGACCACCAGGGGATCCCTGGG
AGCAGCTGTCGGGGGTGGGGGACCAGAACTTGACTCTGGGACCACCCCGC
AATCCTCCTGGGTGCCCAGAGCCATTGTAAGGGGCCCTGAAGCAGCTCAG
GCTGAGGGTGATGCCGCCATCAACAGGGCACCCAGCCCTGGGACAGCACA
GGGGTTTGCAGGAGGCGTGGGTCCAGCAGAGGACAATGCCGGCGGAGGAG
GGGACTCAGCGCCAGCTTTAGGG
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