mRNA_D-mesarthrocarpus_Contig970.9.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A7R9UAS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAS7_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 4.170e-10 Identity = 29/57 (50.88%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 31 EKERDEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVAVEGAPVDDAGNQ 201
E E E+K T+FVGNLP+S + V R F +G+V +VR+RS+AV+G +D+AGNQ
Sbjct: 78 EAETHEEKQRTIFVGNLPVSLKKRHVERFFSRYGRVEAVRLRSMAVKGVKIDEAGNQ 134
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: C1MLA5_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLA5_MICPC) HSP 1 Score: 55.5 bits (132), Expect = 3.180e-7 Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 1
Query: 43 DEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVAVE 171
DE +CTVFVGNLP++T PK + +F +FG V SVRIRSV V+
Sbjct: 161 DELLSCTVFVGNLPLTTKPKLLKSVFSKFGPVVSVRIRSVPVD 203
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A7S3YGS8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGS8_HETAK) HSP 1 Score: 54.3 bits (129), Expect = 3.380e-7 Identity = 23/56 (41.07%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 34 KERDEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVAVEGAPVDDAGNQ 201
+E + K T+FVGN+PIS ++ ++F+++G++ S+R+RSV +G VD+ GNQ
Sbjct: 76 EENNGKDERTIFVGNIPISVKMAQLQKMFKKYGQIESMRMRSVNTQGVAVDEHGNQ 131
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: L8HJS9_ACACA (RNA recognition motif domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJS9_ACACA) HSP 1 Score: 52.0 bits (123), Expect = 5.270e-6 Identity = 20/41 (48.78%), Postives = 32/41 (78.05%), Query Frame = 1
Query: 43 DEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVA 165
++KK CT+FVGN+P++ K++ R+F +GK+ S+R RSVA
Sbjct: 136 EKKKECTIFVGNVPVTVTKKELRRIFAPYGKIQSIRFRSVA 176
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A061RSU3_9CHLO (Rna binding n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RSU3_9CHLO) HSP 1 Score: 50.8 bits (120), Expect = 1.290e-5 Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 1
Query: 58 CTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVAVE--------GAPVDDAGNQVRQS 213
T+FVGN+P+S K + LFR FGKV SVR+RSV V+ GA + N+ R S
Sbjct: 136 ATLFVGNVPLSCTKKNLKTLFRRFGKVVSVRVRSVPVKLDSKMPRRGAVITGTTNEARSS 195
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A061SHY7_9CHLO (Nucleolar protein 12 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SHY7_9CHLO) HSP 1 Score: 50.8 bits (120), Expect = 1.350e-5 Identity = 27/60 (45.00%), Postives = 35/60 (58.33%), Query Frame = 1
Query: 58 CTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVAVE--------GAPVDDAGNQVRQS 213
T+FVGN+P+S K + LFR FGKV SVR+RSV V+ GA + N+ R S
Sbjct: 136 ATLFVGNVPLSCTKKNLKTLFRRFGKVVSVRVRSVPVKLDSKMPRRGAVITGTTNEARSS 195
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A5J4YT46_PORPP (RNA-binding protein 34 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT46_PORPP) HSP 1 Score: 50.8 bits (120), Expect = 1.370e-5 Identity = 22/39 (56.41%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 49 KKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVA 165
+K+ TVFVGN+P + K++TRLF +FGK+ SVR+RS+A
Sbjct: 255 RKSQTVFVGNVPAAATRKQLTRLFSQFGKIESVRLRSIA 293
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: I1GKN9_BRADI (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GKN9_BRADI) HSP 1 Score: 50.1 bits (118), Expect = 2.540e-5 Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 4 GGGEELEQEEKERDEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSVAVEGAPVDDAGNQVR 207
G G + E+E + + K TVFVGNLP+ T K +T+ F FG+V SVRIRSV + + G ++
Sbjct: 128 GAGADEEEEAFDDEAKLLRTVFVGNLPLRTKKKALTKEFAAFGEVESVRIRSVPLGDTKIPRKGAVIK 195
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A0B2UR20_TOXCA (RNA-binding protein 34 n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2UR20_TOXCA) HSP 1 Score: 49.7 bits (117), Expect = 3.440e-5 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 1
Query: 52 KACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSV 162
KACTVFVGN PIS K + +LF ++G + +VR+RSV
Sbjct: 143 KACTVFVGNTPISASRKTIRKLFSKYGPIETVRLRSV 179
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Match: A0A453MLA8_AEGTS (RRM domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453MLA8_AEGTS) HSP 1 Score: 47.0 bits (110), Expect = 5.880e-5 Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 10 GEELEQEEKERDEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRIRSV 162
G E E E + + K TVFVGNLP+ T K +T+ F FG+V SVRIRSV
Sbjct: 29 GGESEDEAFDDEGKLLRTVFVGNLPLRTKRKALTKEFAAFGEVDSVRIRSV 79 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig970.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig970.9.1 >prot_D-mesarthrocarpus_Contig970.9.1 ID=prot_D-mesarthrocarpus_Contig970.9.1|Name=mRNA_D-mesarthrocarpus_Contig970.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=72bp GGGGEELEQEEKERDEKKACTVFVGNLPISTGPKKVTRLFREFGKVASVRback to top mRNA from alignment at D-mesarthrocarpus_Contig970:24932..25147+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig970.9.1 ID=mRNA_D-mesarthrocarpus_Contig970.9.1|Name=mRNA_D-mesarthrocarpus_Contig970.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig970:24932..25147+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig970:24932..25147+ >mRNA_D-mesarthrocarpus_Contig970.9.1 ID=mRNA_D-mesarthrocarpus_Contig970.9.1|Name=mRNA_D-mesarthrocarpus_Contig970.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=216bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig970:24932..25147+ (Discosporangium mesarthrocarpum MT17_79)back to top |