mRNA_D-mesarthrocarpus_Contig97.12.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: D7FT64_ECTSI (E3 ubiquitin-protein ligase Nedd-4, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT64_ECTSI) HSP 1 Score: 157 bits (397), Expect = 6.780e-39 Identity = 106/329 (32.22%), Postives = 153/329 (46.50%), Query Frame = 1
Query: 121 PPLPPDWEERKDENGKVYFVDHSTRSTTRIDPRNESVASVYSPSGGP--------------------------------DTAVGIPAESSSSEQKASPQTSTPSSTAVPPSRTRRWTRSPVRQHGEADGVGMKATVHAFPATEEVMIAPYTVPDDTRQECARCKERFTPIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHLSSGEGVCLVRLATIIVSRPADPFHKQSAVRALSKTLKQIANCSGAGQAETGAGTTAEGRGRGGGLGDLETVK---GGLAELFLAIAPMLSDDVPLDVCARACEVLGACLFMLSQ 1002
PPLP WEER+DE G Y+VDH+TR ++ DPR VG+ +SS E + G V + E++ +P+ +PDD R +C+ C ERF +RRRHHC CCGE+VC++CSP+K ++ V +P Y+R RR C CA+H+++GE C R A I + AD +HKQ+AVR LS ++ A + ++G LG L ++ GG +F A+ PM+S +VPLDVC AC++LGA LF+ S+
Sbjct: 5 PPLPEGWEERRDEQGHTYYVDHNTRRSSWRDPRLVQTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQPTVGMSESTSSLEPRKQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGAGPVDK--SREDIAFSPHLIPDDDRSQCSVCGERFAALRRRHHCRCCGELVCATCSPTKLLMHVSEPGYERPRRACQTCAAHIAAGEYSCNSRYALAIATPGADMYHKQAAVRHLSAAMEDAAKNA----VKSGXXXXXXXXXXXXVLGPLSAIQRVHGGTPAVFQALVPMMSTEVPLDVCTHACQLLGASLFVASR 327
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A6H5KQZ1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ1_9PHAE) HSP 1 Score: 128 bits (322), Expect = 5.310e-29 Identity = 68/156 (43.59%), Postives = 95/156 (60.90%), Query Frame = 1
Query: 535 RRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHLSSGEGVCLVRLATIIVSRPADPFHKQSAVRALSKTLKQIANCSGAGQAETGAGTTAEGRGRGGGLGDLETVKGGLAELFLAIAPMLSDDVPLDVCARACEVLGACLFMLSQ 1002
R RHHC CCGEVVC++CSP+K ++ V +P Y+R RR C CA+H+++GE C R A I + AD +HKQ+AVR LS ++ A + RG L ++ V GG +F A+ PM+S +VPLDVC AC++LGA LF+ S+
Sbjct: 7 RWRHHCRCCGEVVCATCSPTKLLIHVSEPGYERPRRACQTCAAHIAAGEYSCNARYALAIATPGADTYHKQAAVRHLSAAMEDAAKKTVQSXXXXXXXXXXXXXVRGP-LSAIQRVHGGTPAVFEALVPMMSTEVPLDVCTHACQLLGASLFVASR 161
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A7S3UVM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM8_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 5.050e-18 Identity = 60/206 (29.13%), Postives = 96/206 (46.60%), Query Frame = 1
Query: 124 PLPPDWEERKDENGKVYFVDHSTRSTTRIDPRN---------ESVASVYSPSGGPDTAVGIPAESSSSEQKASPQTSTPSSTAVPPSRTRRWTRSPVRQHGEADGVGMKATVHAFPATEEVMIAPYTVPDDTRQECARCKERFTPIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHLSSGEGVCLVRLATII 714
PLP WEE +DE G+++F++H T++TT DPR+ +S S Y+ T+ G P EQ++ +TP VP + Q G A ++ P VPD+ R C ERFT + R+HHC CCG+VV + K ++P+ ++++++VC C H + + CL R ++
Sbjct: 8 PLPEGWEEAQDEQGRIFFINHLTQTTTWDDPRDSQANAKPVLQSNLSAYN------TSNGTP------EQQSDLVEATP----VPLPEDDTFQSLAAAQRGAA----------------AALVLPAEVPDEARDRCPLSGERFTLLNRKHHCKCCGDVVSRGVT-EKLIIPLPGDDFEKEKKVCTDCVEHCKASDPECLKRCLLVL 180
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A4D9CRT6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRT6_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.050e-12 Identity = 62/197 (31.47%), Postives = 94/197 (47.72%), Query Frame = 1
Query: 445 ATEEVMIAPYTVPDDTRQECARCKERFT-PIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRD------RRVCAHCASHLSS-GEGVCLVRLATIIVS--RPADPFHKQSAVRALSKTLKQIANCSGAGQAETGAGTTAEGRGRGGGLGDLETVKGGLAELFLAIAPML-SDDVPLDVCARACEVLGACLFMLSQ 1002
A +E + P+ VPD R C C+ +F +R RHHC CCGE+VC CS K ++P + +K+ RVC HC +H+++ G C+VR T + + + + A+R L + L + G + G A + DLET GG + A+AP+L + PL V A LG L + +Q
Sbjct: 197 ALKEDEVDPFYVPDSMRSGCFLCQVKFQLVVRGRHHCRCCGEIVCDKCSQGKLVLPREHESFKKGPGGELGHRVCDHCHAHVATHGNFRCMVRYVTTLRAGKEASTAAQRYVALRLLVEALDPSTHWKG----DVNLGNDAAQK-----AADLET-SGGAPAICQALAPLLDAATAPLAVQEMALIALGHVLTLTAQ 383
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A7E4VCH7_PANRE (FYVE-type domain-containing protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4VCH7_PANRE) HSP 1 Score: 70.5 bits (171), Expect = 1.510e-9 Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 469 PYTVPDDTRQECARCKERFTPIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHL 669
PY +PD+ C C RFT I RRHHC CCG V+CSSC K +P +D K+++ VC C+ L
Sbjct: 573 PYWIPDEDCPNCMLCTTRFTVINRRHHCRCCGRVLCSSCCNLKRSLPYNDESDKKEK-VCEPCSKTL 638
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A2R5GAZ3_9STRA (Lateral signaling target protein 2-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAZ3_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.520e-9 Identity = 36/75 (48.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 463 IAPYTVPDDTRQECARCKERFT-PIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHLSSGEG 684
+AP+ PD QECA C F+ +RRRHHC CCGEVVC+ CSP+ + PV Y+ RVC C +S EG
Sbjct: 173 VAPWR-PDAEAQECACCSAPFSFLLRRRHHCRCCGEVVCAGCSPN--VAPVPQWGYQGPVRVCEKCFGTTNSPEG 244
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: UPI00193928B0 (uncharacterized protein LOC120348043 isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193928B0) HSP 1 Score: 68.9 bits (167), Expect = 3.070e-9 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 433 HAFPATEEVMIAPYTVPDDTRQECARCKERFTPIRRRHHCSCCGEVVCSSCSPSKTMVP---VDDPRYKRDRRVCAHCASHLSS 675
+ F +T+ V++ P V DD+ C C+ +F IRRRHHC CCG V+CS C ++ VP +D P RVC C +SS
Sbjct: 22 NVFKSTKFVLLKPKWVSDDSASLCVLCRNKFNQIRRRHHCRCCGLVLCSKCCSNRVPVPQYMIDTPE-----RVCNACLPVVSS 100
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A7S1DW46_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DW46_HEMAN) HSP 1 Score: 67.4 bits (163), Expect = 1.540e-8 Identity = 57/218 (26.15%), Postives = 83/218 (38.07%), Query Frame = 1
Query: 124 PLPPDWEERKDENGKVYFVDHSTRSTTRIDPRNESVASVYSPSGGPDTAVGIPAESSSSEQKASPQTSTPSSTAVPPSRTRRWTRSPVRQHGEADGVGMKATVHAFPATEEVMIAPYTVPDDTRQECARCKERFTPIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDR-RVCAHCASHLSSGEGVCLVRLATI--IVSRPADPFHKQSAVRALS 768
PLPP WE++ +G+ Y+VDHST ++T DPR + P +A+ P A + + P + C C+ FT IRR+HHC CCG VVC +CSP VP +D+ R C+ CA HL + C L +I + + P + A RA++
Sbjct: 77 PLPPGWEQQTSPDGRPYWVDHSTHTSTWTDPRT-----LMGGGSMPGSAISAPXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXAPQGDVEQPTWMDHGGITACTLCEAEFTTIRRKHHCRCCGCVVCGACSPQSLPVP----GVSKDKVRTCSECAKHLVTDPTRCNCVLRSIHNLTTEATTPVGQSVACRAIA 271
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A5B7D0L4_PORTR (Zinc finger FYVE domain-containing protein 9 n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7D0L4_PORTR) HSP 1 Score: 67.0 bits (162), Expect = 1.790e-8 Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 463 IAPYTVPDDTRQECARCKERFTPIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHLSS 675
+AP+ +PD+ C C ++FT IRRRHHC CG V+C+ C +T +P D ++ RVC C L S
Sbjct: 700 VAPFWIPDEDAPNCQECGQKFTVIRRRHHCRACGRVLCAPCCHYRTALPYMD---HKEARVCNSCLRILQS 767
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Match: A0A1S8WI97_9TREM (FYVE zinc finger n=1 Tax=Opisthorchis viverrini TaxID=6198 RepID=A0A1S8WI97_9TREM) HSP 1 Score: 65.9 bits (159), Expect = 2.110e-8 Identity = 31/79 (39.24%), Postives = 43/79 (54.43%), Query Frame = 1
Query: 442 PATEEVMIAPYTVPDDTRQECARCKE-RFTPIRRRHHCSCCGEVVCSSCSPSKTMVPVDDPRYKRDRRVCAHCASHLSS 675
PA +EV ++P +PD C C+ FT + RRHHC CCG+VVC CS + M+P R VC+ C + L +
Sbjct: 110 PARDEVKLSPIWIPDAEASHCMVCRNTEFTLVHRRHHCRCCGKVVCHKCSSYRWMLPYQGSSRVR---VCSECHTELQT 185 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig97.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig97.12.1 >prot_D-mesarthrocarpus_Contig97.12.1 ID=prot_D-mesarthrocarpus_Contig97.12.1|Name=mRNA_D-mesarthrocarpus_Contig97.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=305bp MDEKPPLPPDWEERKDENGKVYFVDHSTRSTTRIDPRNESVASVYSPSGGback to top mRNA from alignment at D-mesarthrocarpus_Contig97:47864..50186- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig97.12.1 ID=mRNA_D-mesarthrocarpus_Contig97.12.1|Name=mRNA_D-mesarthrocarpus_Contig97.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2323bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig97:47864..50186- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig97:47864..50186- >mRNA_D-mesarthrocarpus_Contig97.12.1 ID=mRNA_D-mesarthrocarpus_Contig97.12.1|Name=mRNA_D-mesarthrocarpus_Contig97.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=915bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig97:47864..50186- (Discosporangium mesarthrocarpum MT17_79)back to top |