mRNA_D-mesarthrocarpus_Contig9699.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: A0A835YU39_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU39_9STRA) HSP 1 Score: 114 bits (285), Expect = 4.810e-29 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNV 201
IP+TLLLRN E+AEHIN HHEHPTYLKGIKLP HI ATTDAK AL DATY+IHAVPVQY+R+FL+ V
Sbjct: 28 IPSTLLLRNAEIAEHINVHHEHPTYLKGIKLPWHIRATTDAKDALQDATYVIHAVPVQYSRAFLKKV 94
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: D7FSV6_ECTSI (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV6_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.310e-24 Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNV 201
IPTTLL+R+ VAEH+N+H+EHP YLKGIKLP HI AT D K+AL DAT++IHAVPVQYTR FL NV
Sbjct: 306 IPTTLLVRSDSVAEHVNKHNEHPNYLKGIKLPQHIVATADPKEALRDATFVIHAVPVQYTRKFLENV 372
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: B8BQG6_THAPS (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQG6_THAPS) HSP 1 Score: 92.0 bits (227), Expect = 1.530e-20 Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVRGE 210
+PTTLL+R+ +VA HIN +H HP Y+ I LP + AT D K ALSDATYIIHAVPVQYTR FL +V+ +
Sbjct: 38 VPTTLLVRSEDVASHINENHRHPRYMSDICLPRMVRATCDKKSALSDATYIIHAVPVQYTREFLNSVKDD 107
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: A0A7S3V808_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V808_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.680e-19 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVR 204
IPTTLL+R+ ++A+ +N H HP Y+ I LP IHAT D + ALSDATYIIHAVPVQ+TR FL +V+
Sbjct: 114 IPTTLLIRDQDIADQLNLEHRHPRYMSDISLPKMIHATADPESALSDATYIIHAVPVQFTRKFLDSVK 181
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: A0A7S1MYH6_HEMAN (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MYH6_HEMAN) HSP 1 Score: 88.6 bits (218), Expect = 1.770e-19 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVR 204
IP T+L+R E+A+ +N+ H HP YL G++LP I+AT+D +A DATYI+HAVPVQY+R FLRNV+
Sbjct: 87 IPVTILVRRQEIADILNKDHSHPNYLNGMELPKLIYATSDGSEAFKDATYILHAVPVQYSRDFLRNVK 154
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: B7FQ11_PHATC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ11_PHATC) HSP 1 Score: 89.0 bits (219), Expect = 2.030e-19 Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVR 204
IPTTLL+R+ ++A+ IN +H HP Y+K I LP I AT+D +KALSDATYI+HAVPVQY+R+FL +V+
Sbjct: 34 IPTTLLVRSDDIAQSINTNHTHPRYMKDIVLPARIRATSDPEKALSDATYIVHAVPVQYSRAFLDSVK 101
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: A0A7S3Q1I8_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1I8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.640e-19 Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVR 204
IPTTLL+R+ ++A+ +N H HP Y+ I LP IHAT D + ALSDATYIIHAVPVQ+TR FL +V+
Sbjct: 114 IPTTLLIRDQDIADQLNLEHRHPRYMSDISLPKMIHATADPESALSDATYIIHAVPVQFTRKFLDSVK 181
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: A0A7S2PMM1_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMM1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 9.870e-19 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVRGE 210
+P TLL+R EVAE IN +H HP Y+ I LP + AT + K ALSDATYIIHAVPVQYTR +L V+ E
Sbjct: 90 VPVTLLVRTEEVAEEINENHRHPRYMTDIALPRTVRATANKKTALSDATYIIHAVPVQYTREYLATVKDE 159
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: K0TJ00_THAOC (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJ00_THAOC) HSP 1 Score: 87.4 bits (215), Expect = 1.520e-18 Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNV 201
+PTTLL+R+ +VA IN H HPTY+ I LP + ATT+ AL DATYIIHAVPVQYTR FLR+V
Sbjct: 172 VPTTLLVRSDDVARSINEKHRHPTYMSDIALPRTVRATTNKASALGDATYIIHAVPVQYTRQFLRSV 238
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Match: A0A7S2V5B3_9STRA (Glycerol-3-phosphate dehydrogenase [NAD(+)] n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5B3_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.960e-18 Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 IPTTLLLRNMEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYTRSFLRNVR 204
IPTT+L+R EVA+ IN++ HP YLKG+ LP ATTD ++AL+DAT+++HA+PVQ+TRSFL N R
Sbjct: 76 IPTTVLVRKQEVADSINKNRTHPVYLKGVTLPTGFTATTDPQEALADATFLVHAIPVQHTRSFLMNHR 143 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9699.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9699.1.1 >prot_D-mesarthrocarpus_Contig9699.1.1 ID=prot_D-mesarthrocarpus_Contig9699.1.1|Name=mRNA_D-mesarthrocarpus_Contig9699.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=61bp MEVAEHINRHHEHPTYLKGIKLPHHIHATTDAKKALSDATYIIHAVPVQYback to top mRNA from alignment at D-mesarthrocarpus_Contig9699:3358..4468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9699.1.1 ID=mRNA_D-mesarthrocarpus_Contig9699.1.1|Name=mRNA_D-mesarthrocarpus_Contig9699.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1111bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9699:3358..4468+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9699:3358..4468+ >mRNA_D-mesarthrocarpus_Contig9699.1.1 ID=mRNA_D-mesarthrocarpus_Contig9699.1.1|Name=mRNA_D-mesarthrocarpus_Contig9699.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9699:3358..4468+ (Discosporangium mesarthrocarpum MT17_79)back to top |