mRNA_D-mesarthrocarpus_Contig9694.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9694.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9694.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: D7FKS7_ECTSI (T-complex protein 1 subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS7_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 1.770e-91
Identity = 143/168 (85.12%), Postives = 161/168 (95.83%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAVM 504
            ++VK TGVP TG T T+L+RGSNR+VLDEA+RSVHDALCVVRSLVKKRFLI+GGGAAETEVAM+L++W+K+QTGMRGYCIRA+GEALEV+PYTLAENAGMNPIS+VTELRSEH+KG VGAGINVR+GTISDMYAEHVIQPVLV+ SALKLATECV MILKIDDVVAVM
Sbjct:  363 KIVKVTGVPTTGMTMTVLMRGSNRLVLDEAERSVHDALCVVRSLVKKRFLISGGGAAETEVAMQLTEWAKTQTGMRGYCIRAYGEALEVVPYTLAENAGMNPISIVTELRSEHAKGKVGAGINVRKGTISDMYAEHVIQPVLVNSSALKLATECVGMILKIDDVVAVM 530
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A6S9KYX5_HETAK (T-complex protein 1 subunit delta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KYX5_HETAK)

HSP 1 Score: 249 bits (635), Expect = 1.600e-77
Identity = 125/167 (74.85%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
             VVK TG+P      T+L+RGSNR+VLDEADRS+HDALCVVRSLVKK+FLIAGGGA ETEVA++L +W+K+QTGMR +C++A+ EALEVIPYTLAENAGMNPI+LVTELRS HS+G  GAGINVRRG +SDMY E V+QP+LVS SAL LATECV MILKIDDVV+V
Sbjct:  365 NVVKVTGLPDARGKVTLLMRGSNRLVLDEADRSMHDALCVVRSLVKKKFLIAGGGAPETEVAVRLMEWAKTQTGMRAFCVKAYAEALEVIPYTLAENAGMNPIALVTELRSRHSEGEGGAGINVRRGVVSDMYRERVVQPLLVSSSALGLATECVTMILKIDDVVSV 531
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A835YW20_9STRA (T-complex protein 1 subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW20_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.890e-77
Identity = 124/166 (74.70%), Postives = 144/166 (86.75%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVA 498
            +VVK TG P  G TTTIL+RGSNR+VLDEA+RS+HDALCVVRSLVKKRFLIAGGGAAETE+A++L DWSK+ TGM+ YCI+A+ EALEV+PYTLAENAG+NPI  VTELR++H  G  GAGINVR G I+DMY   V+QP+LVS SA+KLATECV MILKIDDVVA
Sbjct:  361 KVVKCTGTPNAGMTTTILVRGSNRLVLDEAERSIHDALCVVRSLVKKRFLIAGGGAAETEMALRLGDWSKTLTGMQAYCIKAYAEALEVVPYTLAENAGLNPIQKVTELRAKHGAGVSGAGINVRSGEITDMYESGVVQPMLVSSSAIKLATECVGMILKIDDVVA 526
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A7S2V5I1_9STRA (T-complex protein 1 subunit delta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5I1_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.340e-72
Identity = 119/167 (71.26%), Postives = 144/167 (86.23%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            +VVK TGV     +  ILLRGSN++VLDEADRSVHDALCV+RSLVK++F+IAGGGA ETEVA++L +WSK+QTGM+ YCIRAF EA+EVIPYTLAENAG+NPI+LVTELR +H++   GAG+NVR+  ISDMY EHVIQP+LVS SA+ LA+ECV MILKIDD+V V
Sbjct:  365 KVVKFTGVANPDASVCILLRGSNKLVLDEADRSVHDALCVMRSLVKEKFMIAGGGAPETEVAVRLMEWSKTQTGMKAYCIRAFAEAMEVIPYTLAENAGLNPITLVTELRKKHNEDESGAGLNVRKSIISDMYKEHVIQPLLVSTSAVGLASECVNMILKIDDLVVV 531
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A482RM47_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RM47_9ARCH)

HSP 1 Score: 224 bits (572), Expect = 8.880e-72
Identity = 111/167 (66.47%), Postives = 141/167 (84.43%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            +V K TGV   G+T ++L+RGSNR+VLDE DRS+HDALCVVRSLVKK+FLIAGGGA ETE+A++L+ WSK+ +GM G C+RAF +A+E+IPYTLAENAGMNP+++VTELR  H++G   AGINV++G ISD+  E+VIQP+LVS S + LATE V MILKIDD+VAV
Sbjct:   61 KVTKITGVAHPGRTVSLLVRGSNRLVLDETDRSLHDALCVVRSLVKKKFLIAGGGAPETEIALQLTQWSKTLSGMHGVCVRAFADAMEIIPYTLAENAGMNPMAIVTELRKRHAEGVKTAGINVKKGIISDILEENVIQPLLVSTSEIALATETVRMILKIDDIVAV 227
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A445DNF1_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445DNF1_ARAHY)

HSP 1 Score: 228 bits (580), Expect = 1.490e-71
Identity = 112/167 (67.07%), Postives = 141/167 (84.43%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            ++VK TG+   GKTTT+L+RGSN++VLDEADRS+HDALCVVR LV KRFLIAGGGA E E++ +L  W+K   GM GYC+RAF EALEVIPYTLAENAG+NPI++VTELR+ H++G + AGINVR+G I+++  E+V+QP+LVS SA+ LATECV MILKIDD+V V
Sbjct:  168 KIVKITGIKDMGKTTTVLVRGSNQLVLDEADRSLHDALCVVRCLVAKRFLIAGGGAPEIELSRQLGAWAKVLHGMEGYCVRAFAEALEVIPYTLAENAGLNPIAIVTELRNRHAQGEINAGINVRKGQITNILEENVVQPLLVSTSAITLATECVRMILKIDDIVTV 334
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: W7T7M9_9STRA (T-complex protein 1 subunit delta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7M9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.690e-70
Identity = 112/167 (67.07%), Postives = 140/167 (83.83%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            +VVK TGV   G T +IL+RGSN++VL+EADRS+HDALCVVRSLVKKRFLIAGGGAAETEV + L++WSK Q GM+ YC+ AF ++LEV+PYTLAEN G+NPI++VTELR  H+ G  G GINVR+  ISDMY E V+QP+LVS+SA+ LA+E VCM++KIDD+V V
Sbjct:  384 KVVKVTGVQNPGSTMSILIRGSNKLVLEEADRSLHDALCVVRSLVKKRFLIAGGGAAETEVNLGLTEWSKMQAGMKAYCVAAFAQSLEVVPYTLAENGGLNPIAIVTELRRRHAGGEKGTGINVRQSNISDMYEERVVQPLLVSLSAISLASETVCMLMKIDDLVPV 550
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A7R9U684_9STRA (T-complex protein 1 subunit delta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U684_9STRA)

HSP 1 Score: 230 bits (586), Expect = 4.160e-70
Identity = 114/167 (68.26%), Postives = 138/167 (82.63%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            +VVK TG+   GKT T+LLRGSN++VLDEA+RSVHDALCV+RSLVK+RF+IAGGGA ET++A++L +WS  Q GM  YC +A+ EALE+IPYTLAENAGMN + +VTELR+ H  G  G GINVR   ISDMY EHV+QP+LVS+SAL LATECV MILKIDD +AV
Sbjct:  376 RVVKVTGIENQGKTMTMLLRGSNKLVLDEAERSVHDALCVLRSLVKERFMIAGGGAPETQLAVRLMEWSSKQQGMVAYCAKAYAEALEIIPYTLAENAGMNAMRMVTELRAHHKDGPPGVGINVRTNQISDMYEEHVMQPLLVSLSALGLATECVVMILKIDDAIAV 542
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A7S3HSJ9_9STRA (T-complex protein 1 subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSJ9_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.820e-69
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            +VVK T +   G T TIL+RGSNRMVLDEADRS+HDALCVVRSLVKKRFLI GGGA E E A++L+ W+K+  G++ YC RAF EALE+IPYTLAENAG+NPI++VTELR+ H++G    GINVR GTISDM+AE ++QP+LV+ S ++LATECV MILKIDD++ V
Sbjct:  368 KVVKFTDIVNMGPTITILMRGSNRMVLDEADRSIHDALCVVRSLVKKRFLIGGGGAPEAECALRLTQWAKTLPGVQSYCARAFAEALEIIPYTLAENAGINPIAMVTELRNRHNQGDFAGGINVRNGTISDMWAEKIVQPLLVNTSEIQLATECVGMILKIDDLIPV 534
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Match: A0A6T6DUJ3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6DUJ3_9STRA)

HSP 1 Score: 217 bits (553), Expect = 8.000e-69
Identity = 109/167 (65.27%), Postives = 136/167 (81.44%), Query Frame = 1 
Query:    1 QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFLIAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGMNPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKLATECVCMILKIDDVVAV 501
            +VVK TGV   GKT T+L+RGSN  VL EA+RS+HDA CVVRSLVKKR LIAGGGA ET+  +KL ++++  TGM  YC +AF +ALEVI YTLAENAGM PI +VTELR +H++G VGAGINV++G +SDMY  +V+QP+LVS SA++LATE VCMI+KIDD+V V
Sbjct:   66 KVVKFTGVKNPGKTMTVLMRGSNEFVLGEAERSLHDAQCVVRSLVKKRALIAGGGAGETQTFLKLQEYARELTGMDAYCFQAFADALEVISYTLAENAGMKPIEVVTELRKQHAEGIVGAGINVKKGKVSDMYELNVVQPLLVSTSAIQLATETVCMIMKIDDLVVV 232
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9694.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS7_ECTSI1.770e-9185.12T-complex protein 1 subunit delta n=2 Tax=Ectocarp... [more]
A0A6S9KYX5_HETAK1.600e-7774.85T-complex protein 1 subunit delta n=1 Tax=Heterosi... [more]
A0A835YW20_9STRA2.890e-7774.70T-complex protein 1 subunit delta n=1 Tax=Tribonem... [more]
A0A7S2V5I1_9STRA1.340e-7271.26T-complex protein 1 subunit delta n=1 Tax=Fibrocap... [more]
A0A482RM47_9ARCH8.880e-7266.47Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A445DNF1_ARAHY1.490e-7167.07Uncharacterized protein n=1 Tax=Arachis hypogaea T... [more]
W7T7M9_9STRA3.690e-7067.07T-complex protein 1 subunit delta n=2 Tax=Monodops... [more]
A0A7R9U684_9STRA4.160e-7068.26T-complex protein 1 subunit delta n=1 Tax=Pinguioc... [more]
A0A7S3HSJ9_9STRA3.820e-6967.07T-complex protein 1 subunit delta n=1 Tax=Spumella... [more]
A0A6T6DUJ3_9STRA8.000e-6965.27Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9694contigD-mesarthrocarpus_Contig9694:2532..4651 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FKS7
Preferred nameCCT4
PFAMsCpn60_TCP1
Model size507
Max annot lvl2759|Eukaryota
KEGG koko:K09496,ko:K09500
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0002199,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0006403,GO:0006457,GO:0006458,GO:0006810,GO:0007275,GO:0007338,GO:0007339,GO:0008037,GO:0008144,GO:0008150,GO:0009566,GO:0009653,GO:0009791,GO:0009886,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0010035,GO:0010038,GO:0010171,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0015630,GO:0017076,GO:0019219,GO:0019222,GO:0019953,GO:0022414,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0031974,GO:0031981,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0035036,GO:0035639,GO:0036094,GO:0040032,GO:0042221,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044093,GO:0044183,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046686,GO:0048518,GO:0048522,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051338,GO:0051347,GO:0051704,GO:0051972,GO:0051973,GO:0060255,GO:0060341,GO:0061077,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070202,GO:0070203,GO:0080090,GO:0090666,GO:0090670,GO:0090685,GO:0097159,GO:0097367,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:1901265,GO:1901363,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904872,GO:1904874,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons4
Evalue2.9e-92
EggNOG OGsCOG0459@1|root,KOG0358@2759|Eukaryota
Descriptionunfolded protein binding
Cds size507
COG categoryO
BRITEko00000,ko03036,ko03110,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791121.9213684-CDS-D-mesarthrocarpus_Contig9694:2531..26631680791121.9213684-CDS-D-mesarthrocarpus_Contig9694:2531..2663Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9694 2532..2663 +
1680791121.933428-CDS-D-mesarthrocarpus_Contig9694:3419..35431680791121.933428-CDS-D-mesarthrocarpus_Contig9694:3419..3543Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9694 3420..3543 +
1680791121.9439437-CDS-D-mesarthrocarpus_Contig9694:3828..39331680791121.9439437-CDS-D-mesarthrocarpus_Contig9694:3828..3933Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9694 3829..3933 +
1680791121.9592206-CDS-D-mesarthrocarpus_Contig9694:4505..46511680791121.9592206-CDS-D-mesarthrocarpus_Contig9694:4505..4651Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9694 4506..4651 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9694.1.1prot_D-mesarthrocarpus_Contig9694.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9694 2532..4651 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9694.1.1

>prot_D-mesarthrocarpus_Contig9694.1.1 ID=prot_D-mesarthrocarpus_Contig9694.1.1|Name=mRNA_D-mesarthrocarpus_Contig9694.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=169bp
QVVKATGVPGTGKTTTILLRGSNRMVLDEADRSVHDALCVVRSLVKKRFL
IAGGGAAETEVAMKLSDWSKSQTGMRGYCIRAFGEALEVIPYTLAENAGM
NPISLVTELRSEHSKGAVGAGINVRRGTISDMYAEHVIQPVLVSISALKL
ATECVCMILKIDDVVAVM*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9694:2532..4651+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9694.1.1 ID=mRNA_D-mesarthrocarpus_Contig9694.1.1|Name=mRNA_D-mesarthrocarpus_Contig9694.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2120bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9694:2532..4651+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTGGTTAAAGCCACGGGGGTGCCGGGCACGGGCAAGACAACGACCAT
CCTCCTGAGGGGATCTAACCGGATGGTGCTCGACGAGGCGGACCGCAGCG
TGCATGACGCCCTCTGCGTAGTCCGTTCCCTCGTAAGCTGTTTTTTTTTT
TTGTTCATGTTGTTTTTGCTCCTTCTGGGGTGGGGGGGGGGGCAAGGTGG
GGGGGAGAAGAGGCCATCGTTTGCACCCTGGTTTTCTGCTATGTTTTTGG
TCTGGGTTTGTTGTGCCTTGTGCGTTGGTTGTGTTTCGCTGCCCTTGTTT
TTTTTTTAATTTTAATTTATTTTTTGTTTGTTTCTGCTGCTCTCGTATTG
TGTACCCACCGGTGAAGAGAAGAACCTGAGAGGTCCGTTTTCTTTTGTGT
TGCTTGTGTTGTCAGGGCTCTCCAAGTGTCTTTTTTTTTTGTGTGCTGCC
GAAGGATTTTTTTTTTTTTTGCTTTCATTTTGTAAGAGCTCTTATGATTT
CTCACTAACAACACATTCCTTTGAAGCATGTGGTTGTGGTGGGGGGGGGG
GGGGGGGGTAAGAAAATCAAGGCTCGTCTGGAGTCGACTTTGCCGCTGTC
ACTGTCACCACTGCTCTGGGAGATATAGGCCTCTTGGAGATACAGGCGAA
GGGGGGGAGAGGGTGCGGGGTACTAGCATAGCAGGAGGGCGAGGGATTAA
ACCCATGCTTCTGGGTAAACAAAATGATTTTCCTGTCCCCCTCCTCTCTC
CCTCTCTCCCTCTCATGATTAGGGTTAGGGTCAGGGTCAGTGCTGCCACT
TGACTGTTGTTCCTTCCTCCCACTGCCATTGTTCTTTGGTCCAGACCCGC
TTCCCCTCCTCCCCCTCCTCCCTCCCCCCTTGTCCCAGGTGAAGAAGAGG
TTCCTGATCGCGGGGGGCGGGGCGGCGGAGACCGAGGTGGCGATGAAACT
CTCTGATTGGTCGAAGTCACAAACGGGGATGAGGGGGTACTGCATACGAG
CCTTTGGGGAGGGTGAGTAGTGATTGAACCCTGAGAAAAAGGGAGGAAAA
GGGGGTAGGAAACGATTTTGTTAGTGCCACTACTTGTGAAGGTGAGCAAG
CCCTAAAATGTGCTCGGGTGTCTAACAGAATAAAATAAGGTAATAGGGGG
GCCATCTCAGCAATGATTTCCCCCTTCCCCCACCAACGGTGCCGTTTTTC
CCTGACCCCAAGTGACCCGAGCCCATGCCCGTGCCCAAACACCAATGTCT
ACTGCAGTTTAAGCATCTCACCATGACCCTAACCCTGAACCCTGCAGCCT
TGGAGGTGATTCCGTATACCCTGGCTGAGAATGCAGGGATGAACCCCATC
AGCCTGGTCACTGAGCTCCGATCGGAGCACAGCAAGGGAGCAGTGGGCGC
AGGTTTGTCTGTCGTGGGGGGGGTGGAGTATGAAGCATTGCTGTCTTGGG
AATGTCTTGCATTGTTGACATGTGTCAGCAATGAAATCAAGGTAGATAGA
AAGGACAGGATAAAGAAGCAATGCATTAGAAGGCAGTCGGTGCTGTGAGT
TGTACTGCAGTAATTTAACTTGGATGTACGTGCATTTCATTTCAGATGTC
AGATCACCAAGACAATGTAGGAAGGAAAGGGTTAGGGTTAGCCCTAACCC
TCCCCTTTATCTTGTCAGTGCACAATGCCCCACAGTCCAAGCAATAGAGG
AAAGGACGGGGGATGGCTAAGGCTCAGCATCTTGTGAGCAAGGTGTTGCC
CCAGCAAACCATGTCACTGTGCATTCATGCCGACCATTTTGTGGGTAGAT
GGGAATAGGCTTTCAAACACTGGCGGCTGGCTACTCTCGACCAATGAACC
TTCCCCTTCCCCCCCGCACCCCCCATGCCCCCCTGTGACACCTGCATGTC
GTCTCTCTCCGATTTCTTTCTGCTCTGCTCTAACCACCTTCACCCGGCGG
CCGTGAAAAAAAAACAAACTAAAGGCATCAACGTGCGCCGGGGCACCATC
AGCGACATGTACGCGGAGCACGTGATCCAGCCCGTGCTGGTGAGCATCAG
CGCCCTGAAGCTGGCCACCGAATGCGTGTGCATGATCCTCAAGATCGATG
ACGTGGTCGCAGTCATGTAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9694:2532..4651+

>mRNA_D-mesarthrocarpus_Contig9694.1.1 ID=mRNA_D-mesarthrocarpus_Contig9694.1.1|Name=mRNA_D-mesarthrocarpus_Contig9694.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=507bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9694:2532..4651+ (Discosporangium mesarthrocarpum MT17_79)
CAGGTGGTTAAAGCCACGGGGGTGCCGGGCACGGGCAAGACAACGACCAT
CCTCCTGAGGGGATCTAACCGGATGGTGCTCGACGAGGCGGACCGCAGCG
TGCATGACGCCCTCTGCGTAGTCCGTTCCCTCGTGAAGAAGAGGTTCCTG
ATCGCGGGGGGCGGGGCGGCGGAGACCGAGGTGGCGATGAAACTCTCTGA
TTGGTCGAAGTCACAAACGGGGATGAGGGGGTACTGCATACGAGCCTTTG
GGGAGGCCTTGGAGGTGATTCCGTATACCCTGGCTGAGAATGCAGGGATG
AACCCCATCAGCCTGGTCACTGAGCTCCGATCGGAGCACAGCAAGGGAGC
AGTGGGCGCAGGCATCAACGTGCGCCGGGGCACCATCAGCGACATGTACG
CGGAGCACGTGATCCAGCCCGTGCTGGTGAGCATCAGCGCCCTGAAGCTG
GCCACCGAATGCGTGTGCATGATCCTCAAGATCGATGACGTGGTCGCAGT
CATGTAG
back to top