mRNA_D-mesarthrocarpus_Contig9682.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9682.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9682.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: D8LJJ8_ECTSI (Protein phosphatase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ8_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.130e-12
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 1
Query:    1 LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKR 174
            +REIF EGE+S GLACEE++DM    GSRDNMSAV+V F G     TG+GV GRR +R
Sbjct:  254 VREIFVEGESSMGLACEEILDM----GSRDNMSAVLVAFPGLKRSETGKGVAGRRAQR 307          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A835ZAX4_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.160e-11
Identity = 34/59 (57.63%), Postives = 39/59 (66.10%), Query Frame = 1
Query:    7 EIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKRQPD 183
            EIF +GE   GLACEELID CL RGSRDNMS V+V F+       G GV GRR  R+ +
Sbjct:  293 EIFADGEARVGLACEELIDTCLARGSRDNMSVVMVAFKALKA-GKGRGVAGRRAAREAE 350          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A1V9ZVL1_9STRA (Phosphatase 2C n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVL1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.370e-11
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 1
Query:    1 LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKRQ 177
            +R + ++GE++ GL CEEL+D CL+ GSRDNMS V+V F G  +  TGEGV G R  R+
Sbjct:  249 VRSLMNKGESNMGLICEELLDHCLQLGSRDNMSVVIVKFAGAKI-GTGEGVMGLRKARE 306          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A1V9YXK3_9STRA (Protein phosphatase 2C n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXK3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.540e-11
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1
Query:    1 LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKRQ 177
            +R + ++GE++ GL CEE++D CL+ GSRDNMS V+V F G  +  TGEGV G R  R+
Sbjct:  243 VRGLMNQGESNMGLICEEMLDHCLQLGSRDNMSVVIVKFSGAKI-GTGEGVMGLRKARE 300          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A1Z5J766_FISSO (Protein phosphatase 1B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J766_FISSO)

HSP 1 Score: 65.5 bits (158), Expect = 5.740e-11
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 1
Query:    7 EIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKRQPD 183
            E+F+EGE+  GL CEEL D+CL +GS+DNM+A+VV  +   +   G GV  RR KR+ D
Sbjct:  316 ELFEEGESDVGLICEELCDLCLNKGSKDNMTALVVKMDAQKI-GEGGGVMARRQKREED 373          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A7S2V4V3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 6.940e-11
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query:    1 LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGE--------GVQGRRNKR 174
            +R+I+ EGET +GL CEEL+D CL +GSRDNMS V+V F     P  G         GV  RR+KR
Sbjct:  253 VRQIYQEGETDSGLVCEELLDTCLTKGSRDNMSVVMVQFPAMLEPPPGTAAGAERGGGVMARRSKR 318          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A7S4AQP9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQP9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.840e-10
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 1
Query:    1 LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQG----RRNKRQ 177
            ++ + DEGE   GL CEE ID CL++ SRDNM+  +V F+GC +P+ G G++     RR  RQ
Sbjct:  307 IQSLLDEGEPDLGLICEEAIDTCLDKNSRDNMTIGMVSFQGCKIPTGGLGIKNVIWQRRAARQ 369          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A7S1DYH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1DYH8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 6.350e-10
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 1
Query:    7 EIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKRQ 177
            +IF EGE+  GLA EEL+DMCL  GS+DNM+++++ F    +   G GV  RR KR+
Sbjct:  116 DIFAEGESDLGLASEELLDMCLSMGSKDNMTSIIIKFPAQEI-GEGGGVMARREKRE 171          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A6U5HF47_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5HF47_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.240e-10
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 1
Query:   10 IFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKR 174
            +F EGE+  GL CEELIDMCL  GS+DNM+A+++ F    +   GEGV GRR  R
Sbjct:  366 MFAEGESDMGLVCEELIDMCLRLGSKDNMTALIIRFPAQQI-GEGEGVTGRRAAR 419          
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Match: A0A067CWE3_SAPPC (PPM-type phosphatase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWE3_SAPPC)

HSP 1 Score: 62.0 bits (149), Expect = 8.780e-10
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 1
Query:    1 LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEGVQGRRNKRQ 177
            +R +  +GE + GL CEE++D CL+ GSRDNMS +VV F G  + S G+GV G R  R+
Sbjct:  249 VRSLMLKGENNMGLICEEMLDHCLQLGSRDNMSVIVVKFSGAKIGS-GDGVMGLRKARE 306          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9682.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJJ8_ECTSI2.130e-1262.07Protein phosphatase, putative n=1 Tax=Ectocarpus s... [more]
A0A835ZAX4_9STRA1.160e-1157.63Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A1V9ZVL1_9STRA1.370e-1152.54Phosphatase 2C n=1 Tax=Thraustotheca clavata TaxID... [more]
A0A1V9YXK3_9STRA2.540e-1150.85Protein phosphatase 2C n=1 Tax=Achlya hypogyna Tax... [more]
A0A1Z5J766_FISSO5.740e-1150.85Protein phosphatase 1B n=2 Tax=Fistulifera solaris... [more]
A0A7S2V4V3_9STRA6.940e-1150.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4AQP9_9STRA3.840e-1046.03Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S1DYH8_9STRA6.350e-1049.12Hypothetical protein (Fragment) n=1 Tax=Thalassion... [more]
A0A6U5HF47_9STRA7.240e-1054.55Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A067CWE3_SAPPC8.780e-1049.15PPM-type phosphatase domain-containing protein n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9682contigD-mesarthrocarpus_Contig9682:254..1040 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LJJ8
PFAMsPP2C
Model size183
Max annot lvl2759|Eukaryota
KEGG koko:K04457,ko:K04461
KEGG Pathwayko04010,ko04013,map04010,map04013
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.49e-13
EggNOG OGsCOG0631@1|root,KOG0697@2759|Eukaryota
EC3.1.3.16
Descriptionmanganese ion binding
Cds size183
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791120.8904657-CDS-D-mesarthrocarpus_Contig9682:253..3191680791120.8904657-CDS-D-mesarthrocarpus_Contig9682:253..319Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9682 254..319 +
1680791120.9035249-CDS-D-mesarthrocarpus_Contig9682:923..10401680791120.9035249-CDS-D-mesarthrocarpus_Contig9682:923..1040Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9682 924..1040 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9682.1.1prot_D-mesarthrocarpus_Contig9682.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9682 254..1040 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9682.1.1

>prot_D-mesarthrocarpus_Contig9682.1.1 ID=prot_D-mesarthrocarpus_Contig9682.1.1|Name=mRNA_D-mesarthrocarpus_Contig9682.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=61bp
LREIFDEGETSAGLACEELIDMCLERGSRDNMSAVVVVFEGCHVPSTGEG
VQGRRNKRQPD
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mRNA from alignment at D-mesarthrocarpus_Contig9682:254..1040+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9682.1.1 ID=mRNA_D-mesarthrocarpus_Contig9682.1.1|Name=mRNA_D-mesarthrocarpus_Contig9682.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=787bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9682:254..1040+ (Discosporangium mesarthrocarpum MT17_79)
CTACGGGAGATCTTTGACGAGGGGGAAACTTCCGCAGGGCTTGCATGTGA AGAGCTTATCGATATGGTGAGAACTTCTTAGGAGAGCCCTCACTGCTGGG AGAGTGGGGGCTGCATGGTGGGGTATCTGTGTGTGGAGGGGGGGGGGGAA TGCGTCTTGCAAATCCCACCCAGTCACGAAAAGAATGAAGGAACGGCGAG GAGGAGTATTTGTTAAAATCCCCCCCCACCCCCCAAAAAAGAAGACCGTT GGTACCCCTAACCCTAGCCCAAACACTAACCCCTCACAAATGGAAACCAA TGTCTTAACCCTTTTGCCATGCATGCAGTGGGGAAAACGAAGGCAAAAGT CCTCAACATGCTTAATCAAATGTGATGGGGAGGGAATGATGAAGTTTTAG TGTGTTGGAAATGCACCTCCTAGTAACGGTAAGACCGAACAGGACATGAA GTAGGAAGAACCCTAACCCTAGTCAACCCTCCCTCCCCCCCCTGTCCCGG CCATTTCATCCTGTTCCTCATCCCATCCCATTCCTAATTCCATTCCAGCC CATTCCTGCTCCTATCCCATCGAATCCTAGTTGCTACGGCCATGCCCACC AAGTTCTCACCTCCACCTCCCCCCCTTGCTGTCCTCCCCTGTTTCATTGT GTGTCCTTGGTTGGACCAAGTGCTTGGAACGGGGCAGCAGGGACAACATG TCGGCAGTGGTAGTGGTGTTCGAGGGGTGTCATGTGCCTTCCACGGGTGA GGGCGTTCAAGGGCGGCGCAACAAGCGTCAGCCTGAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9682:254..1040+

>mRNA_D-mesarthrocarpus_Contig9682.1.1 ID=mRNA_D-mesarthrocarpus_Contig9682.1.1|Name=mRNA_D-mesarthrocarpus_Contig9682.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=183bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9682:254..1040+ (Discosporangium mesarthrocarpum MT17_79)
CTACGGGAGATCTTTGACGAGGGGGAAACTTCCGCAGGGCTTGCATGTGA
AGAGCTTATCGATATGTGCTTGGAACGGGGCAGCAGGGACAACATGTCGG
CAGTGGTAGTGGTGTTCGAGGGGTGTCATGTGCCTTCCACGGGTGAGGGC
GTTCAAGGGCGGCGCAACAAGCGTCAGCCTGAC
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