mRNA_D-mesarthrocarpus_Contig9668.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9668.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9668.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9668.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9668contigD-mesarthrocarpus_Contig9668:927..1481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size555
Hectar predicted targeting categorymitochondrion
Exons1
Cds size318
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791119.6800447-UTR-D-mesarthrocarpus_Contig9668:926..11631680791119.6800447-UTR-D-mesarthrocarpus_Contig9668:926..1163Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9668 927..1163 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791119.6992683-CDS-D-mesarthrocarpus_Contig9668:1163..14811680791119.6992683-CDS-D-mesarthrocarpus_Contig9668:1163..1481Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9668 1164..1481 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9668.2.1prot_D-mesarthrocarpus_Contig9668.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9668 1164..1481 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9668.2.1

>prot_D-mesarthrocarpus_Contig9668.2.1 ID=prot_D-mesarthrocarpus_Contig9668.2.1|Name=mRNA_D-mesarthrocarpus_Contig9668.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=106bp
LKPFKVKVLFDRVWHCYRLQSYSQSLKRGRRIQTSPNTNACVIYCASQFS
SSKSGIEPTGASGAWLISLRFFSGHISSECSSPILWLLVRGSYHHFPPPL
LWILL*
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mRNA from alignment at D-mesarthrocarpus_Contig9668:927..1481-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9668.2.1 ID=mRNA_D-mesarthrocarpus_Contig9668.2.1|Name=mRNA_D-mesarthrocarpus_Contig9668.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=555bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9668:927..1481- (Discosporangium mesarthrocarpum MT17_79)
CTTAAACCGTTCAAGGTGAAGGTCCTATTTGACCGAGTTTGGCATTGTTA
TCGGCTGCAGTCGTATTCACAGAGTCTGAAGAGAGGGCGGCGGATCCAAA
CATCACCAAACACCAATGCGTGTGTGATCTATTGTGCATCACAGTTTTCA
TCTTCAAAGAGCGGGATAGAACCCACTGGAGCTTCAGGTGCCTGGCTCAT
CAGCTTGAGGTTTTTCTCAGGGCACATCTCCTCTGAATGTAGTTCCCCAA
TCTTGTGGCTATTGGTGAGGGGGTCCTATCATCACTTCCCTCCCCCCCTG
CTTTGGATTCTCTTATAATTTTGTGTGGCAAAGGACCTCTCCTCATTTCC
CTGTTTGTATTATGTCATGTCAGTATAGGGTTAGGGCAAGGGCTATACTC
GAAATTTCCGTTCGCTGCTTCTCTATACCTGTTTTACATTACAGTCACAG
CACCGGAGGCACAGAGGAACGTTCTCCTGCCTCCAGGTAAGCCCAACCCT
ATCCCTGGCTCAAACTGAGACAAGTAAGTCAATCTCTCTGAGGATTCCAC
GCCTC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9668:927..1481-

>mRNA_D-mesarthrocarpus_Contig9668.2.1 ID=mRNA_D-mesarthrocarpus_Contig9668.2.1|Name=mRNA_D-mesarthrocarpus_Contig9668.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=318bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9668:927..1481- (Discosporangium mesarthrocarpum MT17_79)
CTTAAACCGTTCAAGGTGAAGGTCCTATTTGACCGAGTTTGGCATTGTTA
TCGGCTGCAGTCGTATTCACAGAGTCTGAAGAGAGGGCGGCGGATCCAAA
CATCACCAAACACCAATGCGTGTGTGATCTATTGTGCATCACAGTTTTCA
TCTTCAAAGAGCGGGATAGAACCCACTGGAGCTTCAGGTGCCTGGCTCAT
CAGCTTGAGGTTTTTCTCAGGGCACATCTCCTCTGAATGTAGTTCCCCAA
TCTTGTGGCTATTGGTGAGGGGGTCCTATCATCACTTCCCTCCCCCCCTG
CTTTGGATTCTCTTATAA
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