mRNA_D-mesarthrocarpus_Contig9661.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: D8LLN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN3_ECTSI) HSP 1 Score: 326 bits (836), Expect = 3.910e-106 Identity = 173/224 (77.23%), Postives = 192/224 (85.71%), Query Frame = 1
Query: 1 PYRLMSASASRRLIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVAEAAKAG 672
P R A+ L + P V+ AL +G P+VALESTIISHGMP+PENL MAR VE+I+R GAVPATVAVL GRPHVGL QLE LA GPRA KCSRRDLAVA++QGVDGATTVAAT+YLASLAGV+VFVTGG+GGVHRG E T D+SADLAELA+TP+VVVCAGVKS+LDIEKTLEVLETNGVPVVSLGTD+FPAFFSPSSGV SPLRLDT +EVA AAKAG
Sbjct: 28 PLRRCLAAWGSTLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKAG 251
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A150GKH1_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GKH1_GONPE) HSP 1 Score: 261 bits (668), Expect = 4.750e-84 Identity = 139/217 (64.06%), Postives = 169/217 (77.88%), Query Frame = 1
Query: 25 ASRRLI-VSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVAEAAKAG 672
A RLI VSPEV+ AL +G PVVALESTIISHGMP+P+NL A +VE +VR GA PAT+A++ G PH+G+ QLE +A G K SRRDL V +++ +DGATTV+ATA LA+LAG++VFVTGG+GGVHRGGEATMD+SADL EL RTPV VVCAG KS+LDI +TLEVLET GVPV + GTDEFPAFF+P SG ++P R+D+ E A AG
Sbjct: 2 ADARLIRVSPEVQAALAEGRPVVALESTIISHGMPWPDNLATALEVEGVVRDSGATPATIAIIEGVPHIGMQRAQLEHIARRGTAVQKVSRRDLPVVIAKRLDGATTVSATAALAALAGIQVFVTGGIGGVHRGGEATMDVSADLTELGRTPVAVVCAGAKSILDIPRTLEVLETLGVPVAAYGTDEFPAFFTPRSGCQAPARVDSPKEAAALLDAG 218
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A2J8A315_9CHLO (Pseudouridine-5'-phosphate glycosidase (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8A315_9CHLO) HSP 1 Score: 256 bits (653), Expect = 2.990e-83 Identity = 133/212 (62.74%), Postives = 164/212 (77.36%), Query Frame = 1
Query: 13 MSASASRRLIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATE 648
MS S L +SPEV+ ALR G PVVALESTIISHGMP+P+NL A +VE VR GA+PAT+A++AG PH+G+ + LE +A G K SRRDL V +++ DGATTV+ATA LA+LAG+ VFVTGG+GGVHRGGE+TMD+SADL E+ RTP+ VVCAG KS+LDI +TLEVLET GV V + GTDEFPAFF+P SG R+P R+D+ E
Sbjct: 11 MSGPDSGLLRISPEVQAALRSGQPVVALESTIISHGMPWPDNLATALEVEAEVRASGAIPATIAIIAGVPHIGMQREALEHIARRGVAVQKVSRRDLPVVIAKHADGATTVSATAALAALAGIHVFVTGGIGGVHRGGESTMDVSADLVEMGRTPIAVVCAGAKSILDIPRTLEVLETWGVAVAAYGTDEFPAFFTPRSGCRAPSRVDSPAE 222
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A835Y3Q7_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y3Q7_9CHLO) HSP 1 Score: 259 bits (661), Expect = 5.980e-83 Identity = 133/206 (64.56%), Postives = 163/206 (79.13%), Query Frame = 1
Query: 37 LIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVA 654
L VSPEV+ AL++G PVVALESTIISHGMP+P+NL A +VE +VR GAVPAT+A++ G PH+G+ QLE +A G K SRRDL V +++ +DGATTV+ATA LA+LAG+ VFVTGG+GGVHRGGE TMD+SADL EL RTP+ VVCAG KS+LDI +TLEVLET GV V + GTDEFPAFF+P SG R+P R+D+ E A
Sbjct: 10 LQVSPEVQAALQQGKPVVALESTIISHGMPWPDNLATALEVEAVVRESGAVPATIAIIQGVPHIGMQRAQLEHIARRGTAVQKVSRRDLPVVIAKRMDGATTVSATAALAALAGIHVFVTGGIGGVHRGGEVTMDVSADLTELGRTPIAVVCAGAKSILDIPRTLEVLETQGVAVAAYGTDEFPAFFTPRSGCRAPARVDSPEEAA 215
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: I0YT19_COCSC (Erwinia chrysanthemi IndA protein-like protein-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YT19_COCSC) HSP 1 Score: 256 bits (653), Expect = 5.720e-82 Identity = 134/211 (63.51%), Postives = 165/211 (78.20%), Query Frame = 1
Query: 16 SASASRRLIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATE 648
+A A++ +++S EV+ ALR+G VVALESTIISHGMPFP+NLE AR VE++VR GAVPAT+A+L G PHVGL ++QL LAS R K SRRDL M++ + GATTV+AT LA+ AG+ +FVTGG+GGVHRGGE+TMD+SADL EL RTPV VVCAG KS+LDI +TLE LET GV V + G DEFPAFF+ SG R+PLR+DT E
Sbjct: 6 AARAAQGIVLSAEVQRALREGTAVVALESTIISHGMPFPQNLETARAVEDVVRGQGAVPATIAILDGIPHVGLTDEQLHSLASQAHRVRKTSRRDLPYVMAKRLHGATTVSATMLLAARAGIHIFVTGGIGGVHRGGESTMDVSADLTELGRTPVAVVCAGAKSILDIPRTLEYLETQGVGVAAYGADEFPAFFTRRSGCRAPLRIDTPEE 216
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A8J4D4U1_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4D4U1_9CHLO) HSP 1 Score: 256 bits (654), Expect = 1.260e-81 Identity = 131/206 (63.59%), Postives = 162/206 (78.64%), Query Frame = 1
Query: 37 LIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVA 654
L +SPEV+ AL +G P+VALESTII+HGMP+P+NL A +VE +VR GAVPAT+A++ G PH+G+ +QLE +A G K SRRDL V M++ +DGATTV+AT+ LA+LAG+ VFVTGG+GGVHRGGE MDISADL EL RTP+ VVCAG KS+LDI +TLEVLET GV V S GT+EFPAFF+P SG RSP R+D+ E A
Sbjct: 6 LEISPEVQAALSEGRPIVALESTIITHGMPWPDNLSTALEVEEVVRASGAVPATIAIIKGVPHIGMQREQLEYIARNGTAVQKVSRRDLPVVMAKQLDGATTVSATSALAALAGIHVFVTGGIGGVHRGGEINMDISADLTELGRTPIAVVCAGAKSILDIPRTLEVLETWGVAVASYGTNEFPAFFTPRSGCRSPARVDSPAEAA 211
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A8J9REA2_9CHLO (Pseudouridine-5'-phosphate glycosidase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9REA2_9CHLO) HSP 1 Score: 256 bits (653), Expect = 7.230e-81 Identity = 133/217 (61.29%), Postives = 167/217 (76.96%), Query Frame = 1
Query: 19 ASASRRLIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVAEAAKA 669
++ ++ ++V EV+ ALR G VVALESTIISHGMPFP+NLE AR VE+++R GAVPAT+A+L G PH+GL ++QL LAS R K SRRDLA M++ + GATTV+AT LA+ AG+ +FVTGG+GGVHRG E+TMD+SADL EL RTPV VVCAG KS+LDI +TLE LET GV V + GTDEFPAFF+ SG R+P+R+DT E AE +A
Sbjct: 87 SATAQGIVVGAEVQRALRMGAAVVALESTIISHGMPFPQNLETARAVESVIREQGAVPATIAILDGVPHIGLTDEQLHSLASQAGRVRKTSRRDLAYVMARRLHGATTVSATMLLAARAGIHIFVTGGIGGVHRGAESTMDVSADLTELGRTPVAVVCAGAKSILDIPRTLEYLETQGVSVAAYGTDEFPAFFTRRSGCRAPMRIDTPEEGAELIRA 303
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A250XM37_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XM37_9CHLO) HSP 1 Score: 253 bits (646), Expect = 8.160e-81 Identity = 128/205 (62.44%), Postives = 164/205 (80.00%), Query Frame = 1
Query: 40 IVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVA 654
+ SPEV AL++G PVVALESTIISHGMP+P+N++ A +VE +V + GAVPAT+A++ G+P +GL +QLE +A GP K SRRDL + +++G+DGATTV+AT LA+ +G+ VFVTGG+GGVHRGGE+TMDISADL ELARTPV V+CAG KSVLDI +TLE LET+GV V + TDEFPAFF+ SSG ++P R D+ EVA
Sbjct: 9 VYSPEVARALQEGRPVVALESTIISHGMPYPQNIQTATEVEEVVSQQGAVPATIAIIGGKPCIGLTREQLEHIAKAGPAVRKVSRRDLPLVIAKGLDGATTVSATMLLAARSGINVFVTGGIGGVHRGGESTMDISADLTELARTPVAVICAGAKSVLDIPRTLEFLETHGVTVTAYQTDEFPAFFTRSSGCKAPCRSDSPLEVA 213
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A2V0PQK0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQK0_9CHLO) HSP 1 Score: 254 bits (649), Expect = 1.390e-80 Identity = 134/211 (63.51%), Postives = 163/211 (77.25%), Query Frame = 1
Query: 37 LIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVAEAAKA 669
L V+PEV ALR+G VVALESTIISHGMP+P+NLE A +VE VR GGAVPAT+A++ GR VGL ++Q+E +A GG K SRRDL +A++ G DGATTV+AT LA+ AG+RVFVTGG+GGVHRGGE++MD+SADL EL RTPV V+CAG KSVLDI +TLE LET GVPV + G DE PAFF+ SG ++P R+DT E A KA
Sbjct: 67 LTVAPEVAAALREGRAVVALESTIISHGMPYPQNLETALEVEARVRAGGAVPATIAIIGGRCCVGLSKEQIERIARGGSAVQKVSRRDLPLAVASGADGATTVSATMLLAARAGIRVFVTGGIGGVHRGGESSMDVSADLTELGRTPVAVICAGAKSVLDIPRTLEYLETQGVPVAAFGADELPAFFTRHSGCKAPCRVDTPREAAALFKA 277
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Match: A0A3S3QX17_9MICO (Pseudouridine-5'-phosphate glycosidase n=1 Tax=Phycicoccus flavus TaxID=2502783 RepID=A0A3S3QX17_9MICO) HSP 1 Score: 252 bits (643), Expect = 1.700e-80 Identity = 140/211 (66.35%), Postives = 167/211 (79.15%), Query Frame = 1
Query: 37 LIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVENIVRRGGAVPATVAVLAGRPHVGLDEQQLEGLASGGPRAWKCSRRDLAVAMSQGVDGATTVAATAYLASLAGVRVFVTGGVGGVHRGGEATMDISADLAELARTPVVVVCAGVKSVLDIEKTLEVLETNGVPVVSLGTDEFPAFFSPSSGVRSPLRLDTATEVAEAAKA 669
L ++PEVR+AL G PVVALESTIISHGMP+PEN+ MAR VE +VR GGAVPAT+AV+AGRP VGL + +LE LAS G K S RDL +S G GATTVA+T +A LAG+ +FVTGG+GGVH+G E++MD+SADL EL+RTPV VV AGVKS+LDI +TLEVLET GVPVV GTD+FP+FFS SSGV P+RLDT EVA A+A
Sbjct: 11 LALAPEVRDALADGHPVVALESTIISHGMPYPENVGMARTVEGLVREGGAVPATIAVIAGRPTVGLGDAELELLASDGSVP-KVSVRDLGRVVSTGSHGATTVASTMRIAGLAGIGLFVTGGLGGVHQGAESSMDVSADLTELSRTPVAVVSAGVKSILDIGRTLEVLETLGVPVVGFGTDDFPSFFSRSSGVPVPMRLDTPEEVAALARA 220 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9661.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9661.1.1 >prot_D-mesarthrocarpus_Contig9661.1.1 ID=prot_D-mesarthrocarpus_Contig9661.1.1|Name=mRNA_D-mesarthrocarpus_Contig9661.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=220bp MSASASRRLIVSPEVREALRKGLPVVALESTIISHGMPFPENLEMARDVEback to top mRNA from alignment at D-mesarthrocarpus_Contig9661:211..4192+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9661.1.1 ID=mRNA_D-mesarthrocarpus_Contig9661.1.1|Name=mRNA_D-mesarthrocarpus_Contig9661.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3982bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9661:211..4192+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9661:211..4192+ >mRNA_D-mesarthrocarpus_Contig9661.1.1 ID=mRNA_D-mesarthrocarpus_Contig9661.1.1|Name=mRNA_D-mesarthrocarpus_Contig9661.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=660bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9661:211..4192+ (Discosporangium mesarthrocarpum MT17_79)back to top |