mRNA_D-mesarthrocarpus_Contig966.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A6H5JQ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ42_9PHAE) HSP 1 Score: 231 bits (588), Expect = 1.250e-58 Identity = 114/146 (78.08%), Postives = 128/146 (87.67%), Query Frame = 2
Query: 317 LGDFYPSMPPKDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQLNSATDVYGNGEDDEVAAA 754
LG M KDYFNL QLMEEAS +RDA RTSAVVSALVQHIM SWREHFARAVAMKFNCFFLMPFVDDFP YLR+EL+KIYEGDVG+IFDIAEARGALVRRR++LV+ECKACHEI+GKFD+IN+QLN+A ++Y NG+ D A A
Sbjct: 485 LGGAGSVMRQKDYFNLQQLMEEASSSRDAERTSAVVSALVQHIMLSWREHFARAVAMKFNCFFLMPFVDDFPSYLRRELEKIYEGDVGDIFDIAEARGALVRRRESLVAECKACHEIQGKFDSINSQLNNAKEIYKNGDQDLEATA 630
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: D8LDP8_ECTSI (ARC5, dynamin-related protein involved in plastid division n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP8_ECTSI) HSP 1 Score: 224 bits (571), Expect = 6.820e-56 Identity = 110/149 (73.83%), Postives = 128/149 (85.91%), Query Frame = 2
Query: 293 SSPLQLYLLGDFYPSMPPKDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQLNSATDVYGNGEDD 739
SS + +Y L D YFNL QLMEEAS +RDA RTSAVVSALVQHIM SWREHFARAVAMKFNCFFLMPFVDDFP YLR+EL+K+YEGDVG+IFDIAEARGALVRRR++LV+ECKACHEI+GKFD+IN+QLN+A ++Y +G+ D
Sbjct: 674 SSMVHIYSLAD---------YFNLQQLMEEASSSRDAERTSAVVSALVQHIMLSWREHFARAVAMKFNCFFLMPFVDDFPSYLRRELEKVYEGDVGDIFDIAEARGALVRRRESLVAECKACHEIQGKFDSINSQLNNAKEIYKDGDQD 813
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A835Z2U6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U6_9STRA) HSP 1 Score: 196 bits (499), Expect = 6.940e-50 Identity = 97/131 (74.05%), Postives = 113/131 (86.26%), Query Frame = 2
Query: 335 SMPPKDYFNLMQLMEEASCTR-DAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGD-VGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQLNSATDVY 721
S+ KDYF+LMQLMEEA+CTR +A RT AVV+ALV+H+M SWREHFAR VAMKFNCFFLMPFVD FPFYLR ELDK+Y GD V ++FDIAEAR AL RRR+ L++ECKACH+I+GKFD INAQLNSA +Y
Sbjct: 389 SVNHKDYFDLMQLMEEAACTRSNAERTGAVVAALVRHVMASWREHFARGVAMKFNCFFLMPFVDAFPFYLRAELDKVYGGDGVADLFDIAEARAALARRREELIAECKACHQIQGKFDLINAQLNSAHALY 519
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A835YPI8_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI8_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.110e-47 Identity = 118/223 (52.91%), Postives = 147/223 (65.92%), Query Frame = 2
Query: 347 KDYFNLMQLMEEASCTR-DAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQLNSATDVYGNGEDDEVAAAEEAFLYAELDSDRGAFHIEGDWSE---DFNSEQINKGGPASSGRGLGEGMTGSEAGAGGVFGAGFVDEED-SNSSEDDVFVNPMAY 1000
+DY +LMQLMEEA+CTR +A RT AVV+ALV+H+M SWREHFAR+VAMKFNCFFLMPFVD FPFYLR ELDK+Y GD+ +FDIAEAR AL RRR+ L++ECKACH+I+GKFD INAQLN+A +Y AA+ A A LD+ G G WS + + + ++G A G G + +E G G AG +D S + V VN M Y
Sbjct: 669 RDYLDLMQLMEEAACTRSNADRTGAVVAALVRHVMGSWREHFARSVAMKFNCFFLMPFVDTFPFYLRTELDKVYSGDLAGLFDIAEARAALARRREELIAECKACHQIQGKFDLINAQLNAAHALYDRD------AADTADALASLDAGAG-----GGWSSLELEDDEDSADEGLGALFGEAAGGDVATAEGGRGASQRAGDSLFDDLSEEEKGGVIVNAMRY 880
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A835Z9B7_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B7_9STRA) HSP 1 Score: 193 bits (491), Expect = 2.690e-46 Identity = 105/170 (61.76%), Postives = 126/170 (74.12%), Query Frame = 2
Query: 344 PKDYFNLMQLMEEASCTR-DAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGD-VGEIFDIAEARGALVRRRDALVSECKACHEIR--------GKFDTINAQLNSATDVYGNGEDD--------EVAAAEEAFLYAELDSDRGA 799
PKDYF+LMQLMEEA+CTR +A RT AVV+ALV+H+M SWREHFAR+VAMKFNCFFLMPFVD FPFYLR ELDK+Y GD V ++FDIAEAR AL RRR+ L++ECKACH+I+ GKFD INAQLNSA +Y D + +AA + A+ DSD G+
Sbjct: 718 PKDYFDLMQLMEEAACTRSNAERTGAVVAALVRHVMASWREHFARSVAMKFNCFFLMPFVDTFPFYLRAELDKVYGGDGVTDLFDIAEARAALARRREELIAECKACHQIQSXXXXXXXGKFDLINAQLNSAHALYDRDAVDTADALASLDASAAATGWSSADEDSDSGS 887
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A7R9UEV7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEV7_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.660e-44 Identity = 79/131 (60.31%), Postives = 106/131 (80.92%), Query Frame = 2
Query: 347 KDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQLNSATDVYGNGEDD 739
KD+ +L+QLMEE +C+RD RTSAVVSALVQHI+ SWR FA+A+ MKFNCFF+MPFVD+FPFYLR ELD++YEGD+ +FDI EAR L+R+R+AL+ ECKA +++ KFD INAQL ++ ++ ++D
Sbjct: 23 KDWSSLLQLMEEVACSRDENRTSAVVSALVQHIIRSWRTQFAKAITMKFNCFFMMPFVDEFPFYLRNELDRLYEGDLTHLFDIGEARSNLMRKREALLHECKANEQLQHKFDAINAQLKASQHLWEVDDED 153
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A4D9DCK2_9STRA (Dynamin-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCK2_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.890e-40 Identity = 79/121 (65.29%), Postives = 105/121 (86.78%), Query Frame = 2
Query: 347 KDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQLNSA 709
+D +L+QLMEEA+C R++ RT+AVVSALVQHI+ SWREHFAR+VAMKFNCFFLMPF+D+FPFYLRQELD++YEGD+ +FDI+E + AL R+RD L++ECKA ++GKFD I++QL ++
Sbjct: 769 QDNRDLLQLMEEAACVRNSNRTNAVVSALVQHIIRSWREHFARSVAMKFNCFFLMPFIDEFPFYLRQELDRVYEGDMANLFDISELKSALKRKRDDLIAECKANERLQGKFDVIDSQLRAS 889
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A7S4N729_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N729_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.530e-29 Identity = 66/116 (56.90%), Postives = 87/116 (75.00%), Query Frame = 2
Query: 347 KDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGE---IFDIAEARGALVRRRDALVSECKACHEIRGKFDT 685
+DY+NL+QLMEEA+C+RDA RT+ VV LVQHI+ WR+ F R V KFNCFFLMPFVD+F +LR EL K+Y+G+ GE IFD+ AR AL ++R+ L+SEC A ++ KFD+
Sbjct: 431 RDYYNLLQLMEEAACSRDANRTNLVVGGLVQHIVAQWRQSFGRTVTTKFNCFFLMPFVDEFHRFLRDELRKVYDGEGGEVCEIFDLVSARKALQQQREELISECTANKLLQQKFDS 546
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: A0A7S0CK04_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CK04_9STRA) HSP 1 Score: 137 bits (344), Expect = 5.110e-29 Identity = 61/118 (51.69%), Postives = 86/118 (72.88%), Query Frame = 2
Query: 347 KDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEGDVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQL 700
+DYF+L+QLMEEA+C+RDA RT+ VV LVQHI+ WRE F R+V KFNCFFL+PFVD+F + R EL ++Y GD+ ++FD+ AR L ++R++L+ EC A ++ KFD I +
Sbjct: 632 RDYFDLLQLMEEAACSRDANRTNLVVGGLVQHIVSQWRESFCRSVTTKFNCFFLLPFVDEFQSFFRSELQRLYAGDLCDVFDLGAARRELQQQRNSLIKECDANKRLQNKFDRIATMM 749
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Match: K0TBP1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBP1_THAOC) HSP 1 Score: 126 bits (317), Expect = 7.550e-29 Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 2
Query: 347 KDYFNLMQLMEEASCTRDAARTSAVVSALVQHIMFSWREHFARAVAMKFNCFFLMPFVDDFPFYLRQELDKIYEG---DVGEIFDIAEARGALVRRRDALVSECKACHEIRGKFDTINAQL 700
+DY NL+QLMEEA CTRD+ RT+ VV LVQHI+ WRE F ++ KFNC+F++PFVDDF YLR EL K+ EG ++ EIFD+A R AL +R D L SEC A ++ KF + A +
Sbjct: 95 RDYANLVQLMEEALCTRDSNRTNLVVGGLVQHIVQQWREAFCKSAITKFNCYFMLPFVDDFHRYLRGELHKVSEGAGGELSEIFDLAATRSALQQRVDELRSECTANKRLQEKFAMVAAMM 215 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig966.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig966.1.1 >prot_D-mesarthrocarpus_Contig966.1.1 ID=prot_D-mesarthrocarpus_Contig966.1.1|Name=mRNA_D-mesarthrocarpus_Contig966.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=351bp MRVHFSSPLQLYLLGDFYPSMPPKDYFNLMQLMEEASCTRDAARTSAVVSback to top mRNA from alignment at D-mesarthrocarpus_Contig966:17516..24187- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig966.1.1 ID=mRNA_D-mesarthrocarpus_Contig966.1.1|Name=mRNA_D-mesarthrocarpus_Contig966.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6672bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig966:17516..24187- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig966:17516..24187- >mRNA_D-mesarthrocarpus_Contig966.1.1 ID=mRNA_D-mesarthrocarpus_Contig966.1.1|Name=mRNA_D-mesarthrocarpus_Contig966.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1053bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig966:17516..24187- (Discosporangium mesarthrocarpum MT17_79)back to top |