mRNA_D-mesarthrocarpus_Contig9657.1.3 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9657.1.3
Unique NamemRNA_D-mesarthrocarpus_Contig9657.1.3
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A6H5KJS5_9PHAE (Non-specific serine/threonine protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJS5_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 1.240e-106
Identity = 217/372 (58.33%), Postives = 253/372 (68.01%), Query Frame = 1
Query:    1 PHEAMLEWLYRGWNVLSFGLVALAVMMIVDSRRAARVFRRLGLKRWAAGAGGEEGFPSGGEGXXXXXXXXXXXLNPGLDSSFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVRGEVRVGCLTVSEVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVS-KKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            P E++L WLYRGW+ +S  L+A+ V ++VDSRRAA+  +R GL  +   +GG  G   GGE             +P  DS  SG       XXXXXXXXXXXX                          VRGEVRVGCLTVS+ VLGYGSHGTVV+RGLLEGRPVAVKRML DFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQ SLHNAMAQIH+V+ ++R++ E  + +S    PR+GLG+ L   D++AP E+R ALLQ+SQGVEHLHSLRIVHRDLKPHNILLAA ER+G  LG R        GG+              G  V+ KKL+ M+D+A FVLKISDMGLGKQL+NGQS
Sbjct:  638 PLESLLGWLYRGWSFVSLLLLAVVVAVVVDSRRAAQYLKRAGLGGYPLYSGGAGGXXVGGE------------YDPTADSGISGASEGSASXXXXXXXXXXXXSLVAAAG------------------GVRGEVRVGCLTVSDTVLGYGSHGTVVYRGLLEGRPVAVKRMLTDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQQSLHNAMAQIHSVLAQSRRKLEHENGRS--GAPRVGLGRALTADDVSAPRELREALLQVSQGVEHLHSLRIVHRDLKPHNILLAAVERKGPGLGRRS------VGGQHAEGGEREGVGDGDGPQVAPKKLSNMQDLAKFVLKISDMGLGKQLVNGQS 971          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: K8Z533_NANGC (Protein kinase domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z533_NANGC)

HSP 1 Score: 175 bits (444), Expect = 8.850e-50
Identity = 101/183 (55.19%), Postives = 124/183 (67.76%), Query Frame = 1
Query:  394 GEVRVGCLTVS-EVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRW--NGPRLGLGQGLARADI-----------TAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAA 900
            G +RVG L V  E VLG+G HGT+VF+G L+ RPVAVKRMLR FHA ADREI LLIESDGHPNVVRYF+RE++G+FVYLAL+LC  SL + + ++   M       EGG  + RW     R+ +G+   R                P  +R+AL QI++GV HLHSLRIVHRDLKPHNILLA+
Sbjct:   13 GVLRVGRLRVCVEEVLGFGCHGTIVFKGKLDERPVAVKRMLRAFHAAADREIRLLIESDGHPNVVRYFLREQSGDFVYLALELCVCSLRDVVGRLEKAMEAV---GEGGGGR-RWAQQSRRVFVGKLSQREGAKDGAEGNETLGVVPAPVRSALFQIAKGVTHLHSLRIVHRDLKPHNILLAS 191          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: W7U7T2_9STRA (Serine threonine protein kinase endoribonuclease ire1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7T2_9STRA)

HSP 1 Score: 179 bits (454), Expect = 2.550e-46
Identity = 121/253 (47.83%), Postives = 149/253 (58.89%), Query Frame = 1
Query:  394 GEVRVGCLTVS-EVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPR------LGLGQGL---ARADIT---APPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            G +RVG L V  E VLG+G HGT+VF+G L+ RPVAVKRMLR FHA ADREI LLIESDGHPNVVRYF+RE++G+FVYLAL+LC  SL + + ++   M       EGG  + R    R      L   +G    A  + T    P  +R+AL QI++GV HLHSLRIVHRDLKPHNILLA+      A                     XXX      +GV        +++ +V KISDMG+GK L  GQS
Sbjct:  121 GVLRVGRLRVCVEEVLGFGCHGTIVFKGKLDERPVAVKRMLRAFHAAADREIRLLIESDGHPNVVRYFLREQSGDFVYLALELCVCSLRDVVGRLEKAMEAV---GEGGGGRRRAQQSRRVFVGKLSQREGAKDGAEGNETLGVVPAPVRSALFQIAKGVTHLHSLRIVHRDLKPHNILLASASTTPSAPAXXXXXX-------------XXXIPPLLVDGVE-------ELSQYVCKISDMGVGKLLALGQS 350          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A4D9CQF7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQF7_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.920e-46
Identity = 121/254 (47.64%), Postives = 151/254 (59.45%), Query Frame = 1
Query:  394 GEVRVGCLTVS-EVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITA-------------PPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            G +RVG L V  E VLG+G HGT+VF+G L+ RPVAVKRMLR FHA ADREI LLIESDGHPNVVRYF+RE++G+FVYLAL+LC  SL + + ++   M    +   GG  +      R+ +G+   R    A             P  +R+AL QI+ GV HLHSLRIVHRDLKPHNILLA+      A  +                  XXXXXX   +GV        +++ +V KISDMG+GK L  GQS
Sbjct:  273 GILRVGRLRVCVEEVLGFGCHGTIVFKGKLDERPVAVKRMLRAFHAAADREIRLLIESDGHPNVVRYFLREQSGDFVYLALELCVCSLRDVVGRLEKAMEAVGE--SGGGRRRAQQSRRVFVGKLSQREKEGAEDGAEGNETLGVVPAPVRSALFQIANGVTHLHSLRIVHRDLKPHNILLASAATTPSAPASHXXXX-------------XXXXXXLLVDGVE-------ELSQYVCKISDMGVGKLLALGQS 504          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A7S1BEX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BEX4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 3.220e-45
Identity = 114/239 (47.70%), Postives = 143/239 (59.83%), Query Frame = 1
Query:  397 EVRVGCLTVSEVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            E+ VG L V   +LG G HGTVV+RG LEGR VAVKRMLR ++A ADREISLLIESDGHPNVVRYF++E AGEFVYLAL+LC+LSL +A+  +  V          G+ K    G    L Q +    I   P ++ AL QI++GV HLH L IVHRDLKP NILLA +ER     G++++                      +G   +  + +      ++ KISDMGLGKQL  GQS
Sbjct:  479 EMSVGVLRVYPEILGLGGHGTVVYRGNLEGRQVAVKRMLRAYNAAADREISLLIESDGHPNVVRYFLKEVAGEFVYLALELCELSLQDAIVALVKV----------GEGK----GTPKTLDQTVECPKIA--PGVQHALWQIARGVRHLHRLHIVHRDLKPQNILLA-RER-----GSQQRTAAVNG------------TDATKGVAAAHSIYRALHQREYIFKISDMGLGKQL-TGQS 682          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A6U5FW69_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FW69_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.180e-44
Identity = 114/239 (47.70%), Postives = 143/239 (59.83%), Query Frame = 1
Query:  397 EVRVGCLTVSEVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            E+ VG L V   +LG G HGTVV+RG LEGR VAVKRMLR ++A ADREISLLIESDGHPNVVRYF++E AGEFVYLAL+LC+LSL +A+  +  V          G+ K    G    L Q +    I   P ++ AL QI++GV HLH L IVHRDLKP NILLA +ER     G++++                      +G   +  + +      ++ KISDMGLGKQL  GQS
Sbjct:  479 EMSVGVLRVYPEILGLGGHGTVVYRGNLEGRQVAVKRMLRAYNAAADREISLLIESDGHPNVVRYFLKEVAGEFVYLALELCELSLQDAIVALVKV----------GEGK----GTPKTLDQTVECPKIA--PGVQHALWQIARGVRHLHRLHIVHRDLKPQNILLA-RER-----GSQQRTAAVNG------------TDATKGVAAAHSIYRALHQREYIFKISDMGLGKQL-TGQS 682          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A7S4J014_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J014_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.830e-44
Identity = 106/234 (45.30%), Postives = 136/234 (58.12%), Query Frame = 1
Query:  415 LTVSEVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKAL-GNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            + +++ VLGYG HGTVV+RG ++GR VAVKRML+ +HA ADREISLLIESDGHPNVVRYF++E  G+FVYLAL+LC +SL++ +  +  +    +   + G              +G +R         ++ALLQIS GV HLHSLRIVHRDLKP NILLA + R G  + GN                               K +        +V KISDMGLGKQL+ GQS
Sbjct:  854 IRITDEVLGYGGHGTVVYRGTMDGRNVAVKRMLKTYHASADREISLLIESDGHPNVVRYFLKELKGDFVYLALELCDMSLNDLIVALSKIKYSQQDEEDVGQ-------------EGNSRISAAT----KSALLQISSGVRHLHSLRIVHRDLKPQNILLAQRSRGGFLVDGNTPSLPN------------------------EKHIYATFQQDDYVPKISDMGLGKQLV-GQS 1045          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A7R9U9X0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9X0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 7.630e-42
Identity = 107/245 (43.67%), Postives = 134/245 (54.69%), Query Frame = 1
Query:  394 GEVRVGCLTVSEV-VLGYGSHGTVVFRGLLEGRPVAVKRMLRDFH---ARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPE-IRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            G + VG L V    +LG GSHGT+VF+G L+GRPVAVKRMLR  H   A  DREISLLIESDGH NVV+Y+V+EE   FVYLALQLC LSLH+A+  +                    + PR     G  R     PPE +  +L QI++G+ HLH+LRIVHRDLKP NIL+++++        R+                         E +S +     D   F   ISDMGLGK LL G+S
Sbjct:   17 GRLIVGALAVETASILGLGSHGTIVFKGSLDGRPVAVKRMLRTLHSQNASIDREISLLIESDGHQNVVKYYVKEETSNFVYLALQLCSLSLHDAVKALQYAEA---------------SRPRDDEAPGSPR-----PPESVVRSLKQINEGICHLHNLRIVHRDLKPQNILMSSQQ-----FSEREDAF----------------------EDISVRGGSSFD--DFTFLISDMGLGKLLLPGES 212          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A1Z5JJ54_FISSO (Non-specific serine/threonine protein kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ54_FISSO)

HSP 1 Score: 164 bits (416), Expect = 4.450e-41
Identity = 100/230 (43.48%), Postives = 131/230 (56.96%), Query Frame = 1
Query:  427 EVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLA-AKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFVLKISDMGLGKQLLNGQS 1113
            +V+LGYG HGTVVF+GLL+GR VAVKRML+ +HA ADREISLLIESDGH NVVRYF++E  G+FVYLAL+LC LSLH+ +  +                               +   + +    R+ L+QI+ GV HLH LRIVHRDLKP NILLA ++ ++ K   ++K                             +   ++ +   +V KISDMGLGKQL+ GQS
Sbjct:  591 DVILGYGGHGTVVFKGLLDGRQVAVKRMLKAYHASADREISLLIESDGHANVVRYFLKETRGDFVYLALELCDLSLHDLIGAL------------------------------CSEPKVRSLAATRSLLVQIANGVRHLHRLRIVHRDLKPANILLADSRNQKSKRKDDKKD---------------------------DESPIRLFERGLYVAKISDMGLGKQLV-GQS 762          
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Match: A0A1E7FVP7_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVP7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.020e-41
Identity = 109/238 (45.80%), Postives = 131/238 (55.04%), Query Frame = 1
Query:  415 LTVSEVVLGYGSHGTVVFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAGEFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQGLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERRGKALGNRKKFVGAGAGGEXXXXXXXXXXXXXRGEGVSKKLTQMRDVASFV-----LKISDMGLGKQLLNGQS 1113
            ++VSE VLGYG HGTVV++G+LEGR VAVKRML+ +HA ADREISLLIESDG PNVVRYF++E  G+FVYLAL+LC LSLH  +A +         R      KS                 +     IR  LLQI+ GV+HLHSLRIVHRD+KP NILLA  +R                                   G  K+  +     +F       KISDMGLGKQL+ GQS
Sbjct:  130 ISVSEDVLGYGGHGTVVYKGILEGRSVAVKRMLKAYHASADREISLLIESDGDPNVVRYFLKEVRGDFVYLALELCDLSLHELIAIL---------RVNQQQTKS-----------------VFMYAIIRI-LLQIASGVKHLHSLRIVHRDMKPANILLAISKR-----------------------------------GKKKRKDEDSIFVNFANNYYDAKISDMGLGKQLM-GQS 304          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9657.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJS5_9PHAE1.240e-10658.33Non-specific serine/threonine protein kinase n=2 T... [more]
K8Z533_NANGC8.850e-5055.19Protein kinase domain-containing protein (Fragment... [more]
W7U7T2_9STRA2.550e-4647.83Serine threonine protein kinase endoribonuclease i... [more]
A0A4D9CQF7_9STRA3.920e-4647.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1BEX4_9STRA3.220e-4547.70Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A6U5FW69_9STRA1.180e-4447.70Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4J014_9STRA5.830e-4445.30Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7R9U9X0_9STRA7.630e-4243.67Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1Z5JJ54_FISSO4.450e-4143.48Non-specific serine/threonine protein kinase n=2 T... [more]
A0A1E7FVP7_9STRA7.020e-4145.80Kinase-like protein (Fragment) n=1 Tax=Fragilariop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9657contigD-mesarthrocarpus_Contig9657:541..4637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2H1
Preferred nameIRE1
PFAMsPQQ,PQQ_2,Pkinase,Ribonuc_2-5A,zf-CCCH
Model size1119
Max annot lvl2759|Eukaryota
KEGG koko:K08852
KEGG Pathwayko04140,ko04141,ko04210,ko04932,ko05010,map04140,map04141,map04210,map04932,map05010
Hectar predicted targeting categorysignal peptide
Exons5
Evalue8.76e-105
EggNOG OGsCOG0515@1|root,KOG1027@2759|Eukaryota
EC2.7.11.1
Descriptionribonuclease activity
Cds size1107
COG categoryKLT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9657.1.3prot_D-mesarthrocarpus_Contig9657.1.3Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9657 541..4625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791119.0346978-CDS-D-mesarthrocarpus_Contig9657:540..6411680791119.0346978-CDS-D-mesarthrocarpus_Contig9657:540..641Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9657 541..641 -
1680791119.0478768-CDS-D-mesarthrocarpus_Contig9657:707..8591680791119.0478768-CDS-D-mesarthrocarpus_Contig9657:707..859Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9657 708..859 -
1680791119.059607-CDS-D-mesarthrocarpus_Contig9657:2141..23201680791119.059607-CDS-D-mesarthrocarpus_Contig9657:2141..2320Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9657 2142..2320 -
1680791119.0744224-CDS-D-mesarthrocarpus_Contig9657:2873..29911680791119.0744224-CDS-D-mesarthrocarpus_Contig9657:2873..2991Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9657 2874..2991 -
1680791119.0883715-CDS-D-mesarthrocarpus_Contig9657:4068..46251680791119.0883715-CDS-D-mesarthrocarpus_Contig9657:4068..4625Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9657 4069..4625 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791119.1000264-UTR-D-mesarthrocarpus_Contig9657:4625..46371680791119.1000264-UTR-D-mesarthrocarpus_Contig9657:4625..4637Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9657 4626..4637 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9657.1.3

>prot_D-mesarthrocarpus_Contig9657.1.3 ID=prot_D-mesarthrocarpus_Contig9657.1.3|Name=mRNA_D-mesarthrocarpus_Contig9657.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=369bp
MLEWLYRGWNVLSFGLVALAVMMIVDSRRAARVFRRLGLKRWAAGAGGEE
GFPSGGEGAGAGVGAGAGELNPGLDSSFSGGSEASAVGSAAGVAGGSLGN
GVAPGAAPGAPGGGPGAGGAGAGAAVRGEVRVGCLTVSEVVLGYGSHGTV
VFRGLLEGRPVAVKRMLRDFHARADREISLLIESDGHPNVVRYFVREEAG
EFVYLALQLCQLSLHNAMAQIHNVMVRARKRTEGGDNKSRWNGPRLGLGQ
GLARADITAPPEIRAALLQISQGVEHLHSLRIVHRDLKPHNILLAAKERR
GKALGNRKKFVGAGAGGEAGAGPGGGIGSGSRGEGVSKKLTQMRDVASFV
LKISDMGLGKQLLNGQSR*
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mRNA from alignment at D-mesarthrocarpus_Contig9657:541..4637-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9657.1.3 ID=mRNA_D-mesarthrocarpus_Contig9657.1.3|Name=mRNA_D-mesarthrocarpus_Contig9657.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4097bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9657:541..4637- (Discosporangium mesarthrocarpum MT17_79)
CCCCACGAGGCGATGCTGGAGTGGCTATATCGTGGCTGGAATGTCCTCTC GTTTGGACTTGTGGCCCTGGCAGTGATGATGATTGTTGACTCCCGCCGGG CCGCAAGAGTTTTCCGGCGCCTTGGGCTCAAGCGGTGGGCAGCCGGAGCT GGGGGAGAGGAGGGGTTTCCCAGTGGGGGAGAGGGGGCCGGGGCAGGGGT CGGCGCGGGGGCAGGGGAGCTTAACCCGGGTCTGGACAGCAGTTTTAGCG GGGGCTCAGAGGCCTCGGCTGTTGGGTCAGCAGCAGGGGTGGCTGGGGGC AGCTTGGGCAACGGGGTGGCACCTGGGGCAGCGCCTGGGGCACCTGGGGG TGGCCCTGGGGCTGGCGGGGCCGGGGCTGGGGCGGCTGTGCGGGGGGAGG TCCGGGTGGGGTGCCTGACAGTCTCGGAGGTGGTCCTTGGCTACGGGTCA CATGGGACAGTGGTGTTCCGGGGCCTGCTAGAGGGGCGTCCTGTGGCGGT GAAGCGCATGCTGAGGGACTTCCACGCACGGGCAGACCGGGAGATAAGCC TTCTCATCGAGTCGGATGGGTGAGAGATTATTGTTGTGTCCCATTATTAT TATTATTGTTATTATTGTTATTCTTATTATTAATATGATTATTATTATTG TATCACATTGGTTAGATTGTGTCAAACCTGTAGTCATAGAGTGAGAAAAT AAAAATAAAAACAATGGAAGCAAGAAAAACAAAGGAGGAAAACAAGGCTT CAAAACAAAAAAAAAACTGAACAATCCCATGTATCAAAAGAATACAAAAA GAGAAACGCAAACGACTCCAGGGAATATTGGATGTGGGACTGGATGGATT TGTGTGGTGCAGCCCAGCAGTAGGGGGCATTTTCAGCGTGTTGTCTAGGG GGGGGGGGTTGTGTTACAGGTGTGGATGGAGTGGTCCATGGCTTGGGGGG GGGGGGTGAAAGGGTAGGATGGCGGGATGTTTTGTGGTGGTGGGGGGGGG GTTCGCTGATGGACAGGGTACAGGGGGGGGGGGCATGGTATGTGGAGGTG TGGGGTGTTCAACAATGGGGTGTGAGTAACTTGAATAGCTTGAAGGGTTT TGTTTCGATGGGCTGGATGGATGGTTTAGGGTTGGGTTAGGGTGGGGACA AGGAGTTTAGGGGTTGGAGGGGGCAGGGTAACAGGTAGACAGGTGACAGG AGAGGGGCACTTTTGTGTCTGACTTTGTGGTCGGAATGCGTCTGCAGGTA TGTTGTGTTGTGATGGTTCGATGGGTCCTTGGCTTGAGAAGCCTCCCTAA ACCTAAACCTAACACTGACCCTTATCCTAATCCCAAACCTAACTCCAACC CCAAACCTAACCCCAACCCTAACCCTACCCCTAACGGGTTTTCGTTGTTT TTTTGCTGCCGTTGTGCGCCGCCTCATCCCTCTTGTGGTTCATGCCCCTT ATGTACCTACCTATGTACCTGCCTATGTACCGGCTTACCTACCTGCCTAC CTACCTGCCTACCTACAAACGTACCTGCCTAACCTTACCTTACCTCATTC CCTCACAGTGTGGTACCCTGTATAATCTCCGTCGCCTTTTTAACCTTTCT GCCTCTCTGCCTCTTACCTCTTTGCCTATCTGCCTCTTTTGTGCAGACAT CCCAATGTGGTCCGATATTTCGTTAGGGAGGAGGCTGGAGAGTTTGTGTA CCTGGCCCTCCAGCTCTGCCAGCTCAGTCTGCACAATGCCATGGCGCAGA TCCACAATGTCATGGTGAAGGCCAGGGGGAGGGGGAGTCCTTTGGGATGA GATGTGCTTGCCATGTTTCCTTCGCGATTATAATTGCCTTCTCGGCGCCC CCTTCCCCCATGGCTTACTTGGTAATATGTTGATATTTTATGTTGACATT TCATGTTGATATTTTATGCTGCTACCCATAACCAATTTTGGTATTTGGTG TTGTTTCGCACGGTCCTGCCTCCCTGCTGTGAGAAAAAGGAAGGAAACCA GAGGTAAGGGTTAGGGTTAGGGGGGGTCCAGCCAGTTGTCTCCACACTGG AATGTACTGATGGAAGGCGGGCTGGGCACAGGCGATGAGGTGCACGTATT TTGATACTTGTGTTTGTGACATGGCTTTCCTTTTTTCCCTCTATTTCCCT TCTCCCAGTCCTGTAACAACAACGGTGCTCGCAAACTTGACCCATGCCCC CCTTCCCCTGGACTTTCTACGCGTCAACTATTATCTAGTTGGAATTCTGA ATGGGATGGGATGGGATGAAATGGGTATGTGTGTGTGACCAACGGACCCT CTCTTTTTTTTTTTCAGGTCCGGGCCCGGAAGCGGACGGAAGGGGGAGAC AACAAGAGTAGGTGGAATGGCCCTAGGCTGGGGCTGGGGCAAGGGCTGGC AAGGGCAGACATCACGGCCCCTCCTGAGATCAGGGCGGCCTTGCTCCAGA TCAGCCAGGGTGTGGAGCACCTGCATAGCCTGAGGATAGTGCATAGGTGG GTGGTGGGTGCCTTTCTTTTCTTTTTTACCTGGAGGTGTGGGGTGGGGGT GGGCAACGATGATGGTGGTTGAGTGTTTTTCAATGATAGTTTTGACAGCC CACAAGGAGAGCTTTCATCACTGGGTGGACTTTTGCCTTGTGAGGCTAGT GTAGACTCCTGGGAAGGGAAGACAGCAAGCTGAGCCCGTCTTTAGTGCCC CCAAACCGTGGCTTTTATCCCTGACCCTAACTCCTGCCATGTCCGCCTCT GTGTGTACGGTGTGGTGCTTGAGGTAGTATGTGTCGAGGCACGGATGGAC GGGGCCAGGGGGGGGGGGGGGGCATTATACGGAGAGGACTGATTGTGACT ATTGGTGGTGTTGGGTGGAGTAGGAGAGTGAAAGTTTTGGTGTGATGTGC GTACCAAAACCCTTTTTTTTTGTCTCTGCTCTTGATCAAGCGGGCAAGGG CAGCCAAACCCCAACCCTATGCAACCCTGACCTGGGGCAAGGTGAACAGC AGTTTGTGGACATGCCCTGGAACACTCACGATGTGAGTGTGTGTGTGTGT ATTTTTTTCACTGGCGTCCCATTTTCCTTCCTGTCTATTTTTTTCTCTGT TTATTCCAAGACAAGAAAGGGCAACACCCGTTGTCAGTTCGCCGTCGTTC TTATATGCAGGGGAGGGAGACTGTCGTGCTGTGCCCCCCCCCCCTCCCAA CGCTAACCCTCACTGTTGTAACGAATTCCCTGCGTACAGAGAGTGTGCAG AGAGAGAACATGAAGAGAAAACAGCTGTAGCCAAGTGCTGAGCCTGTGCT GTTTGTGTCCGGGAGAACGCGTTGCGTGCAACACAGTGTTGATGTGGTAC GGCTGTGTTAACGCGATCCTCGTGTCTGGTTTTGTTGTGTTCTCCACGTG TAGGGTTAGGGCTTGCCTGTGTTTTGGTTGCACTACACAGATGCACGAAC GAACGTGCAAGGTATGACAGCTTAGGGTTAGGGCTAGGGCTAGGGTTAGG GTTAAGGTTGGGGTTGGGGTTGGGGTCTGGGTTAGGGTTAGGGTTAGGGT TTGGGCTTGGGTTTGGGTTAGAGTTGGAGGGTCTGCCAGAGACAATGGCC CCAAAAGGGGGAGGGAGTAGAACTTGCTCCGGTAAACTTGACCCCTTTCA CCCCAGCCGTATCCCCAACCCTAATAACGAACAAGACAAAGCATGCCTGT TTGCTCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCC ATCTATTTTTTCCCCCCCCTGTTTCCAGGGACCTGAAGCCGCACAACATC CTGCTGGCAGCGAAAGAGCGCCGGGGGAAGGCCCTTGGGAACCGGAAAAA GTTTGTTGGTGCCGGGGCCGGGGGCGAGGCTGGGGCCGGGCCGGGGGGAG GGATAGGGTCTGGGAGCAGAGGAGAGGGAGGTGACGGCTCCCGGGGCGGC TGGGGGCAGGGGGAGGAGGAGGAGGGGCGGGGGGGGGGGGAGGAAGTCTC GAAGAAGTTGACGCAGATGAGGGATGTGGCAAGCTTCGTCCTTAAGATAT CAGACATGGGGCTTGGGAAGCAGCTCCTCAACGGGCAGAGCAGGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9657:541..4637-

>mRNA_D-mesarthrocarpus_Contig9657.1.3 ID=mRNA_D-mesarthrocarpus_Contig9657.1.3|Name=mRNA_D-mesarthrocarpus_Contig9657.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1107bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9657:541..4637- (Discosporangium mesarthrocarpum MT17_79)
ATGCTGGAGTGGCTATATCGTGGCTGGAATGTCCTCTCGTTTGGACTTGT
GGCCCTGGCAGTGATGATGATTGTTGACTCCCGCCGGGCCGCAAGAGTTT
TCCGGCGCCTTGGGCTCAAGCGGTGGGCAGCCGGAGCTGGGGGAGAGGAG
GGGTTTCCCAGTGGGGGAGAGGGGGCCGGGGCAGGGGTCGGCGCGGGGGC
AGGGGAGCTTAACCCGGGTCTGGACAGCAGTTTTAGCGGGGGCTCAGAGG
CCTCGGCTGTTGGGTCAGCAGCAGGGGTGGCTGGGGGCAGCTTGGGCAAC
GGGGTGGCACCTGGGGCAGCGCCTGGGGCACCTGGGGGTGGCCCTGGGGC
TGGCGGGGCCGGGGCTGGGGCGGCTGTGCGGGGGGAGGTCCGGGTGGGGT
GCCTGACAGTCTCGGAGGTGGTCCTTGGCTACGGGTCACATGGGACAGTG
GTGTTCCGGGGCCTGCTAGAGGGGCGTCCTGTGGCGGTGAAGCGCATGCT
GAGGGACTTCCACGCACGGGCAGACCGGGAGATAAGCCTTCTCATCGAGT
CGGATGGACATCCCAATGTGGTCCGATATTTCGTTAGGGAGGAGGCTGGA
GAGTTTGTGTACCTGGCCCTCCAGCTCTGCCAGCTCAGTCTGCACAATGC
CATGGCGCAGATCCACAATGTCATGGTCCGGGCCCGGAAGCGGACGGAAG
GGGGAGACAACAAGAGTAGGTGGAATGGCCCTAGGCTGGGGCTGGGGCAA
GGGCTGGCAAGGGCAGACATCACGGCCCCTCCTGAGATCAGGGCGGCCTT
GCTCCAGATCAGCCAGGGTGTGGAGCACCTGCATAGCCTGAGGATAGTGC
ATAGGGACCTGAAGCCGCACAACATCCTGCTGGCAGCGAAAGAGCGCCGG
GGGAAGGCCCTTGGGAACCGGAAAAAGTTTGTTGGTGCCGGGGCCGGGGG
CGAGGCTGGGGCCGGGCCGGGGGGAGGGATAGGGTCTGGGAGCAGAGGAG
AGGGAGTCTCGAAGAAGTTGACGCAGATGAGGGATGTGGCAAGCTTCGTC
CTTAAGATATCAGACATGGGGCTTGGGAAGCAGCTCCTCAACGGGCAGAG
CAGGTAG
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