mRNA_D-mesarthrocarpus_Contig9635.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9635.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9635.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A846FR41_9CYAN (M48 family metallopeptidase n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FR41_9CYAN)

HSP 1 Score: 426 bits (1094), Expect = 1.510e-149
Identity = 209/248 (84.27%), Postives = 229/248 (92.34%), Query Frame = 1
Query:    1 MKKKVIVEDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            M+KK IVEDISI    S+IPAKIYQE RYNVRYSMGK+GAILRLP HLSS+EKI+YTEQFI+WVQ+QLDKR DLAQQYQPK YQTGD +QVG+RTYEL V +GDRKTHSAKV G +IELKLSEHQ+G+ALTKSIKTLLSRVI QDF PEI+ERVH +N +YFQSDIKQ+RLKYNRSNWGSCSSSGNINLSTRLLFAPQ VIDYVI+HELAHTKEMNHSKRFWSLVEGVMP+YKEKEKWLK+NSHLCDF
Sbjct:    1 MRKKAIVEDISIKLADSTIPAKIYQESRYNVRYSMGKRGAILRLPAHLSSSEKIRYTEQFIQWVQKQLDKRADLAQQYQPKSYQTGDILQVGQRTYELSVTQGDRKTHSAKVKGTVIELKLSEHQQGLALTKSIKTLLSRVIGQDFHPEISERVHTLNRTYFQSDIKQIRLKYNRSNWGSCSSSGNINLSTRLLFAPQSVIDYVIIHELAHTKEMNHSKRFWSLVEGVMPAYKEKEKWLKQNSHLCDF 248          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A5C6RVI8_9BACT (M48 family metallopeptidase n=2 Tax=Phaeodactylibacter luteus TaxID=1564516 RepID=A0A5C6RVI8_9BACT)

HSP 1 Score: 262 bits (669), Expect = 4.710e-84
Identity = 137/253 (54.15%), Postives = 172/253 (67.98%), Query Frame = 1
Query:    1 MKKKVIVE----DISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMG-AMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            M KK I      D  +      IPA++Y+E R NVR S+GK  AILRLP+HLS AE+ +  + F  WV Q++ + K L+  ++P+ Y+ GD +QVGER Y L +   DRKTH+ K++    I LKLS    G +L+K+I+ LLSR++AQDFLP IT+RV  +N  +FQ  I  V LKYN SNWGSCSS+GNINLSTRLLFAPQ VIDYVI+HELAH  EMNHS RFW LV   MP YK+KE+WLK N     F
Sbjct:   56 MPKKTIKHSARIDFQLKVEGQEIPARLYREFRTNVRASIGKTAAILRLPVHLSKAEQDRQVKWFTSWVAQRVSQSKALSDHFEPRTYRDGDILQVGERRYSLKLQWEDRKTHTGKLLPEGSILLKLSREDNGHSLSKNIQHLLSRIVAQDFLPAITQRVQELNQQHFQQPINGVHLKYNHSNWGSCSSAGNINLSTRLLFAPQEVIDYVIIHELAHRLEMNHSPRFWKLVSDAMPDYKDKEEWLKVNGSKLTF 308          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: UPI00146BBA58 (M48 family metallopeptidase n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00146BBA58)

HSP 1 Score: 259 bits (661), Expect = 9.650e-84
Identity = 125/241 (51.87%), Postives = 174/241 (72.20%), Query Frame = 1
Query:   22 EDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            E I +  GT  +P +I +E+R ++R SMGK   I+R PI+L + E++ + E+  +W+++Q +K++ L Q+YQ   YQ GDT++VG+R YEL + K DRKT +A +    I L+L+++ +    +KSI+TLLSRV+  D+LPEIT+RV A+N  YFQ  +K V+LKYN SNWGSCS+SGNINLSTRLLFAP  V+DYVI+HELAH  E+NHS RFW+ V   MP Y++KE WLK+    CDF
Sbjct:    4 EWIKLKIGTMEVPVQIIREKRRSIRASMGKDNVIMRFPINLPAGEEVAHRERLTKWLEKQYEKKEGLFQRYQKADYQDGDTLRVGDRQYELRLRKEDRKTSAASLKQGQIVLRLNKNLDEQQFSKSIRTLLSRVVGADYLPEITQRVQALNEQYFQRPLKGVKLKYNHSNWGSCSNSGNINLSTRLLFAPPEVVDYVIIHELAHLVELNHSHRFWAEVAKAMPDYEKKEAWLKEFGAGCDF 244          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A7C3GF62_9BACT (M48 family peptidase n=1 Tax=Phaeodactylibacter sp. TaxID=1940289 RepID=A0A7C3GF62_9BACT)

HSP 1 Score: 254 bits (650), Expect = 4.650e-82
Identity = 128/242 (52.89%), Postives = 166/242 (68.60%), Query Frame = 1
Query:   19 VEDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            V+ I +      +PAKIY E R NVR S GK   ILR+PI L+ A++ +    F  WVQ+Q  K K+L  ++  K Y+ GD ++VG R Y L     D+KTH+A +   ++ LKLS+H   + L K+IK LLSRVIA D+ PEIT RV+ +N+ +F+  +K ++ KYN+SNWGSCSS GN+NLSTRLLFAP  V+DYVI+HELAH  EMNHS RFW LV   MP Y+EKEKWLK+N HLC F
Sbjct:    4 VQKIYVEVNGKHVPAKIYHENRRNVRASFGKNSVILRMPILLTPAQQKEQFAWFKGWVQEQFAKHKNLHTRFFGKNYKDGDVLKVGTREYVLKFDFIDKKTHTANLENGILHLKLSKHDSPVHLQKAIKHLLSRVIANDYKPEITRRVNELNNLFFKMPVKGLKFKYNQSNWGSCSSQGNLNLSTRLLFAPDAVVDYVIIHELAHLIEMNHSNRFWKLVSDAMPDYEEKEKWLKENGHLCQF 245          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A098RYK8_9BACT (DUF45 domain-containing protein n=1 Tax=Phaeodactylibacter xiamenensis TaxID=1524460 RepID=A0A098RYK8_9BACT)

HSP 1 Score: 244 bits (622), Expect = 1.090e-77
Identity = 124/248 (50.00%), Postives = 166/248 (66.94%), Query Frame = 1
Query:    4 KKKVIVEDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVM-GAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            K K  ++ +++  G +++P +IY+E R+NVR S+GK  A LR+P  L + E+ ++   F  W+ +Q+ K   + + +  + YQ GDT++VG++ Y L +   DRKTHS K++    I LKLS H +    TK ++ LLSR++AQDFLP    RV  +N  +FQ +I +VRLKYN SNWGSCSS GNINLSTRLLFAP  VIDYVI+HELAH  EMNHS RFW LV   MP YKEKEKWLK +     F
Sbjct:    7 KAKPTLQQLTLDIGGTTVPVRIYKEYRHNVRASIGKTAAFLRMPHGLHAREEERHLNWFKDWLHEQVAKSDRINRHFGHRAYQDGDTLEVGKKQYRLAITYEDRKTHSGKLLPDGTIALKLSHHDQVPEFTKRLQHLLSRIVAQDFLPXXXXRVDDLNDRFFQQNIGEVRLKYNHSNWGSCSSKGNINLSTRLLFAPDDVIDYVIIHELAHRIEMNHSPRFWKLVSDAMPDYKEKEKWLKVHGGKLGF 254          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A2T4XCB9_9BACT (DUF45 domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4XCB9_9BACT)

HSP 1 Score: 241 bits (614), Expect = 1.290e-76
Identity = 122/241 (50.62%), Postives = 162/241 (67.22%), Query Frame = 1
Query:   22 EDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            E + +  G   +P +I +ERR +VR  MGK+  I R P HL+  E   + E+ I+W+ +Q  KR    Q+YQ   YQTGDT++VG+R Y+L + + DRKT +  V    I L LS+       +++I+TLLSR++A D LP IT+RVH +N  +F+  IK V+LKYN SNWGSCS+SGNINLSTRLLFAP  VIDYVI+HELAH  E+NHS RFW  V+  MP+Y+E E WLK+    CDF
Sbjct:    4 EWLKLRIGDQDVPVRIIRERRRSVRAYMGKEHVIFRFPSHLTPTEAAFHRERLIQWLHKQFRKRAGALQRYQHADYQTGDTLRVGQRQYQLQLQQADRKTSTGNVENDTIRLLLSDQLNAQQRSEAIRTLLSRLVALDQLPYITQRVHELNQRFFRRPIKGVKLKYNHSNWGSCSNSGNINLSTRLLFAPPVVIDYVIIHELAHLVELNHSDRFWYQVQQAMPNYEEHEAWLKQFGGQCDF 244          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A7Y5MWZ1_9BACT (M48 family metallopeptidase n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7Y5MWZ1_9BACT)

HSP 1 Score: 239 bits (611), Expect = 3.920e-76
Identity = 128/248 (51.61%), Postives = 164/248 (66.13%), Query Frame = 1
Query:    1 MKKKVIVEDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            MKK+     +S+    + IP KI +ERR NVR ++GK GA LR+P   S +E+ ++      W+ ++L +R  LAQ++ PK Y  GD +QVGER Y L VA  DRK+H+AK+    I L+LS    G+ L KSIK LLSRV+AQDFLPEI  RV   N  +FQ +I  V+L+YN+SNWGSCS SG I LSTRLLF P  V+DYVIVHELAH  E NHS  FW++V   +P YK+  KWLK +   CDF
Sbjct:    1 MKKQTQHTTLSV--NDAVIPVKIIRERRPNVRIAIGKTGATLRMPTLTSISEERKHLSWLNEWLHERLAQRATLAQRFTPKTYSDGDVLQVGERRYVLRVATEDRKSHTAKLQKDTIVLRLSTLDTGLELEKSIKQLLSRVVAQDFLPEIERRVDDWNDRFFQKEISGVQLRYNQSNWGSCSRSGFIRLSTRLLFTPPQVLDYVIVHELAHLVEFNHSPNFWAVVAKAIPDYKQAVKWLKAHGESCDF 246          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A2D0MXC2_9BACT (DUF45 domain-containing protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0MXC2_9BACT)

HSP 1 Score: 239 bits (610), Expect = 5.930e-76
Identity = 124/248 (50.00%), Postives = 169/248 (68.15%), Query Frame = 1
Query:    4 KKKVIVEDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIH-LSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            K ++I+ D++       IP K+  ERR N+R ++GKK  ILR+P +  S+    Q  ++   W+ +   KR     +   + Y  G  ++VG R Y L + + DR+THSA++   +IELK++    G  L ++IKTLLSRVI  D LP+IT RVH IN  YF+  ++ V+L+YN S WGSCS++GNINLSTRLLFAPQPVIDYVIVHELAH  EMNHS RFW +V+ V+P+YKE EKWL++NS+LCDF
Sbjct:    5 KSELILIDVA----GKRIPLKVVYERRPNIRAAIGKKEVILRIPNNPFSTVNVSQEIDRIKGWLLEVDRKRDGALDRLAIREYIDGQILEVGARQYRLSIREEDRQTHSARLQDGVIELKIARADAGPNLQQNIKTLLSRVIGNDHLPQITRRVHEINDRYFRKPVQSVKLRYNHSRWGSCSTNGNINLSTRLLFAPQPVIDYVIVHELAHMVEMNHSPRFWKVVKDVLPNYKEMEKWLRENSYLCDF 248          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A3M1YXM1_9BACT (M48 family peptidase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1YXM1_9BACT)

HSP 1 Score: 238 bits (608), Expect = 1.540e-75
Identity = 117/241 (48.55%), Postives = 161/241 (66.80%), Query Frame = 1
Query:   22 EDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            + + I      IPAKIY+E R N+RY++GK+G ++R+P+ LS  ++  Y ++F  WVQ+Q  K   L + +  K Y++GD ++VG+R Y L     D + H+A++    I L+L+         K+IK LLSR +A DF P I +RV  +N  YF  +IK+++LKYN + WGSCSS   INLSTRLLFAP  VIDYVI+HELAH  EMNHS RFW+++EG+MP Y+EKEKWLK N   CDF
Sbjct:   16 QKLIIRVNEQEIPAKIYREFRDNIRYTIGKRGPVMRMPLSLSKQQENTYIQEFKDWVQKQFSKNDILREHFLGKEYKSGDVLKVGDREYVLHFEYTDLQNHTARIKANHIILRLTRLDTEHGTQKAIKHLLSRTVANDFKPYIYKRVAELNRLYFNKEIKKIQLKYNHTRWGSCSSKQIINLSTRLLFAPLDVIDYVIIHELAHMVEMNHSPRFWAIIEGIMPDYREKEKWLKANGPSCDF 256          
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Match: A0A6N6KPX7_9BACT (M48 family peptidase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KPX7_9BACT)

HSP 1 Score: 235 bits (599), Expect = 2.750e-74
Identity = 122/233 (52.36%), Postives = 160/233 (68.67%), Query Frame = 1
Query:   49 SSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSSAEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFVAKGDRKTHSAKVMGAMIELKLSEHQE-GMALTKSIKTLLSRVIAQDFLPEITERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPVIDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF 744
            + IP ++ +ERR ++R S+GK+  ILR+P  + +    +  +    W+++ + K+ D       K Y TGD ++VGERTY L +   DRKTH+AK+ G  I+L L+E ++ G+AL K+IK LLSRV+A DFLPEI  RV  +N  +FQ    +V LKYN SNWGSCSS GNINLSTRLLFAPQ VIDYVI+HELAH  E NHS RFW+LVEG MP YK+K ++LK N    DF
Sbjct:   16 NQIPVQVVRERRRSMRVSVGKRAVILRMPSGIMAPGTQKGIDWSKNWLEELVRKKPDALDHLLSKSYNTGDQLKVGERTYFLDITYKDRKTHAAKLEGNTIKLSLNEQEKSGVALQKAIKHLLSRVVASDFLPEIERRVDDLNDRFFQKPFNKVSLKYNHSNWGSCSSKGNINLSTRLLFAPQEVIDYVIIHELAHLIERNHSNRFWALVEGAMPDYKDKVRFLKANGKQYDF 248          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9635.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A846FR41_9CYAN1.510e-14984.27M48 family metallopeptidase n=1 Tax=Cyanothece sp.... [more]
A0A5C6RVI8_9BACT4.710e-8454.15M48 family metallopeptidase n=2 Tax=Phaeodactyliba... [more]
UPI00146BBA589.650e-8451.87M48 family metallopeptidase n=1 Tax=Lewinella coha... [more]
A0A7C3GF62_9BACT4.650e-8252.89M48 family peptidase n=1 Tax=Phaeodactylibacter sp... [more]
A0A098RYK8_9BACT1.090e-7750.00DUF45 domain-containing protein n=1 Tax=Phaeodacty... [more]
A0A2T4XCB9_9BACT1.290e-7650.62DUF45 domain-containing protein n=1 Tax=Bacteroide... [more]
A0A7Y5MWZ1_9BACT3.920e-7651.61M48 family metallopeptidase n=1 Tax=Saprospiraceae... [more]
A0A2D0MXC2_9BACT5.930e-7650.00DUF45 domain-containing protein n=1 Tax=Flavilitor... [more]
A0A3M1YXM1_9BACT1.540e-7548.55M48 family peptidase (Fragment) n=1 Tax=Bacteroide... [more]
A0A6N6KPX7_9BACT2.750e-7452.36M48 family peptidase n=1 Tax=Bacteroidetes bacteri... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9635contigD-mesarthrocarpus_Contig9635:2086..2832 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1122176.KB903565_gene3415
PFAMsDUF45
Model size747
Max annot lvl976|Bacteroidetes
KEGG koko:K07043
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.8e-84
EggNOG OGsCOG1451@1|root,COG1451@2|Bacteria,4NIY4@976|Bacteroidetes,1IUYI@117747|Sphingobacteriia
DescriptionProtein of unknown function DUF45
Cds size747
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791117.0348487-CDS-D-mesarthrocarpus_Contig9635:2085..28321680791117.0348487-CDS-D-mesarthrocarpus_Contig9635:2085..2832Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9635 2086..2832 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9635.2.1prot_D-mesarthrocarpus_Contig9635.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9635 2086..2832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9635.2.1

>prot_D-mesarthrocarpus_Contig9635.2.1 ID=prot_D-mesarthrocarpus_Contig9635.2.1|Name=mRNA_D-mesarthrocarpus_Contig9635.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp
MKKKVIVEDISIAHGTSSIPAKIYQERRYNVRYSMGKKGAILRLPIHLSS
AEKIQYTEQFIRWVQQQLDKRKDLAQQYQPKVYQTGDTIQVGERTYELFV
AKGDRKTHSAKVMGAMIELKLSEHQEGMALTKSIKTLLSRVIAQDFLPEI
TERVHAINHSYFQSDIKQVRLKYNRSNWGSCSSSGNINLSTRLLFAPQPV
IDYVIVHELAHTKEMNHSKRFWSLVEGVMPSYKEKEKWLKKNSHLCDF*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9635:2086..2832+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9635.2.1 ID=mRNA_D-mesarthrocarpus_Contig9635.2.1|Name=mRNA_D-mesarthrocarpus_Contig9635.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9635:2086..2832+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGAAAAAAGTAATAGTAGAAGACATCAGTATTGCGCATGGTACCTC AAGTATCCCAGCGAAGATCTACCAAGAACGAAGATACAACGTTCGGTATT CGATGGGTAAAAAAGGGGCTATCCTGCGCCTACCGATACATCTTTCCTCC GCCGAAAAAATCCAATATACAGAACAGTTTATTCGGTGGGTTCAACAACA ATTGGATAAACGAAAGGATCTCGCCCAGCAATATCAGCCCAAGGTTTATC AAACAGGAGACACCATCCAGGTCGGAGAAAGAACTTATGAATTATTCGTG GCCAAAGGGGATCGCAAAACGCATAGCGCGAAGGTAATGGGAGCCATGAT TGAACTGAAGCTAAGCGAGCATCAGGAAGGGATGGCGCTAACGAAGAGCA TCAAAACCTTGCTTAGCCGTGTGATCGCCCAAGATTTTCTCCCCGAAATA ACGGAGCGGGTTCACGCCATTAACCACTCCTACTTTCAATCCGATATTAA ACAAGTTAGGCTAAAGTACAATCGATCCAATTGGGGCAGTTGTTCATCCA GTGGTAACATCAATCTATCCACTAGACTATTATTTGCACCGCAGCCAGTG ATCGACTACGTTATTGTACATGAGTTGGCGCACACGAAGGAGATGAATCA TTCTAAGCGATTCTGGAGCCTGGTGGAAGGAGTGATGCCATCCTATAAGG AAAAGGAAAAATGGTTGAAAAAGAATAGTCACCTTTGTGATTTTTAG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9635:2086..2832+

>mRNA_D-mesarthrocarpus_Contig9635.2.1 ID=mRNA_D-mesarthrocarpus_Contig9635.2.1|Name=mRNA_D-mesarthrocarpus_Contig9635.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9635:2086..2832+ (Discosporangium mesarthrocarpum MT17_79)
ATGAAGAAAAAAGTAATAGTAGAAGACATCAGTATTGCGCATGGTACCTC
AAGTATCCCAGCGAAGATCTACCAAGAACGAAGATACAACGTTCGGTATT
CGATGGGTAAAAAAGGGGCTATCCTGCGCCTACCGATACATCTTTCCTCC
GCCGAAAAAATCCAATATACAGAACAGTTTATTCGGTGGGTTCAACAACA
ATTGGATAAACGAAAGGATCTCGCCCAGCAATATCAGCCCAAGGTTTATC
AAACAGGAGACACCATCCAGGTCGGAGAAAGAACTTATGAATTATTCGTG
GCCAAAGGGGATCGCAAAACGCATAGCGCGAAGGTAATGGGAGCCATGAT
TGAACTGAAGCTAAGCGAGCATCAGGAAGGGATGGCGCTAACGAAGAGCA
TCAAAACCTTGCTTAGCCGTGTGATCGCCCAAGATTTTCTCCCCGAAATA
ACGGAGCGGGTTCACGCCATTAACCACTCCTACTTTCAATCCGATATTAA
ACAAGTTAGGCTAAAGTACAATCGATCCAATTGGGGCAGTTGTTCATCCA
GTGGTAACATCAATCTATCCACTAGACTATTATTTGCACCGCAGCCAGTG
ATCGACTACGTTATTGTACATGAGTTGGCGCACACGAAGGAGATGAATCA
TTCTAAGCGATTCTGGAGCCTGGTGGAAGGAGTGATGCCATCCTATAAGG
AAAAGGAAAAATGGTTGAAAAAGAATAGTCACCTTTGTGATTTTTAG
back to top