mRNA_D-mesarthrocarpus_Contig9624.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9624.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9624.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A6H5K370_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K370_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 5.350e-47
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 1
Query:   31 GWAGFGAAKALSESG--SCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            GWAGFGAAKAL+E+G  S +VTLLDASPNPGGLS+GWRT GGRAVEAG+KGFWWSYPNIY LVE ELK+ENPF+DWTRSSFFSP GLQV A V
Sbjct:   83 GWAGFGAAKALTEAGEGSYEVTLLDASPNPGGLSAGWRTAGGRAVEAGMKGFWWSYPNIYDLVERELKIENPFTDWTRSSFFSPDGLQVEAPV 175          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: D8LIB3_ECTSI (Amino_oxidase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB3_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 6.840e-45
Identity = 78/93 (83.87%), Postives = 84/93 (90.32%), Query Frame = 1
Query:   31 GWAGFGAAKALSESG--SCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            GWAGFGAAKAL+E+G  S +VTLLDASPNPGGLS+GWRT GGRAVEAGIKGFWWSYPNIY LVE ELK+ENPF+DWTRSSFFSP GLQV A V
Sbjct:   28 GWAGFGAAKALTEAGEGSYEVTLLDASPNPGGLSAGWRTAGGRAVEAGIKGFWWSYPNIYDLVERELKIENPFTDWTRSSFFSPDGLQVEAPV 120          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A0G4G8W3_VITBC (Amino_oxidase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G8W3_VITBC)

HSP 1 Score: 133 bits (334), Expect = 1.770e-34
Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 1
Query:    4 RRSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVEN-PFSDWTRSSFFSPKGLQVCARV 303
            R+ VVVVGGGWAGFGAAK L+E G  DVTLLDASPNPGGLSSGWRT+ GR VEAGIKGFW+ YPNI+ L+ ++LK+   P ++ T S  +SP GLQ  A V
Sbjct:    8 RKRVVVVGGGWAGFGAAKHLAEEGY-DVTLLDASPNPGGLSSGWRTKEGRTVEAGIKGFWYQYPNIFSLIHDDLKITPWPLTECTESGLWSPSGLQCVAPV 107          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A7I4C7D6_PHYPA (Amino_oxidase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C7D6_PHYPA)

HSP 1 Score: 128 bits (322), Expect = 3.100e-33
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    7 RSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            R+ VVVGGGWAGFGAA AL++ G   VT+LDASP+PGGLS+G+RT  GR VEAGIKGFWW Y NIY L++E + V  PF+DWT SSF+SP+G+QV A V
Sbjct:   78 RTAVVVGGGWAGFGAAHALTKLGF-SVTVLDASPSPGGLSTGFRTAQGRPVEAGIKGFWWQYHNIYSLLKE-VNVVWPFTDWTMSSFYSPEGIQVEAPV 174          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A1Y1HRR9_KLENI (Amine oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRR9_KLENI)

HSP 1 Score: 129 bits (325), Expect = 3.160e-33
Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query:    4 RRSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            ++  VVVGGGWAGFGAA  L+  G   VTLLDASP+PGGLS G+RT  GRAVEAG+KGFW+ Y NIYRLVEE L +  PF++WTRSSF+SP G+QV A V
Sbjct:    9 KKKAVVVGGGWAGFGAAYQLARCGFA-VTLLDASPDPGGLSGGFRTSQGRAVEAGMKGFWYQYHNIYRLVEE-LSILPPFTEWTRSSFYSPAGIQVEAPV 106          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A7I4C4P7_PHYPA (Amino_oxidase domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C4P7_PHYPA)

HSP 1 Score: 128 bits (322), Expect = 8.820e-33
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 1
Query:    7 RSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            R+ VVVGGGWAGFGAA AL++ G   VT+LDASP+PGGLS+G+RT  GR VEAGIKGFWW Y NIY L++E + V  PF+DWT SSF+SP+G+QV A V
Sbjct:   17 RTAVVVGGGWAGFGAAHALTKLGF-SVTVLDASPSPGGLSTGFRTAQGRPVEAGIKGFWWQYHNIYSLLKE-VNVVWPFTDWTMSSFYSPEGIQVEAPV 113          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A7S0RH60_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RH60_9CHLO)

HSP 1 Score: 128 bits (322), Expect = 9.590e-33
Identity = 63/99 (63.64%), Postives = 77/99 (77.78%), Query Frame = 1
Query:    7 RSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            + VVV+GGGW GFGAAK L+E G  +VTLLDA  NPGGLS+G+RT+ G+AVEAG+KGFW+ Y NI+RL+EE    E P +DWT S F+SPKGL  CA V
Sbjct:   25 KRVVVIGGGWGGFGAAKHLAEQGY-EVTLLDAQANPGGLSTGFRTKSGQAVEAGMKGFWYEYKNIFRLLEELRLPEWPLTDWTTSGFWSPKGLVTCAPV 122          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A5J4XCT2_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XCT2_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 2.470e-32
Identity = 64/95 (67.37%), Postives = 76/95 (80.00%), Query Frame = 1
Query:    7 RSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQV 291
            +  VVVGGGW GFGAA AL ++G   VT+LDAS  PGGLS+GWRT GGR+VEAGIKGFW+ Y NI  LV E L ++NPF+DWTRSSF++P GLQV
Sbjct:   23 KHAVVVGGGWGGFGAAYALLKAG-VKVTILDASETPGGLSAGWRTPGGRSVEAGIKGFWYQYSNINALVGE-LGIDNPFTDWTRSSFWAPDGLQV 115          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A5J4XU83_9CHLO (Amine oxidase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XU83_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 2.690e-31
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 1
Query:   13 VVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            VV+VGGGWAGFGAAK LS+ G   VTLLD SPNPGGLS+GWRT+ GRAVEAG+KGFW+ Y NI+ L+ E L +  P +DWT S F+SP GL   A V
Sbjct:  102 VVIVGGGWAGFGAAKHLSQQGY-SVTLLDVSPNPGGLSAGWRTQQGRAVEAGVKGFWYQYHNIFALIRE-LGIPWPLTDWTTSGFWSPSGLTTEAPV 196          
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Match: A0A250WSE0_9CHLO (Amino_oxidase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WSE0_9CHLO)

HSP 1 Score: 123 bits (308), Expect = 9.750e-31
Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:    4 RRSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGGRAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCARV 303
            +++VV+VG GWAGFGAAK LSE G  +VTLL+ASPNPGGL+SGWRT  GR VEAG+KGFW+ Y NI+ L+EE    E P + WT S F+SP+GL   A V
Sbjct:   34 QKNVVIVGQGWAGFGAAKHLSEQGY-NVTLLEASPNPGGLASGWRTASGREVEAGMKGFWYQYKNIFALLEELELSEWPLTSWTTSGFWSPRGLVTEAPV 132          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9624.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K370_9PHAE5.350e-4782.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIB3_ECTSI6.840e-4583.87Amino_oxidase domain-containing protein n=1 Tax=Ec... [more]
A0A0G4G8W3_VITBC1.770e-3466.34Amino_oxidase domain-containing protein n=1 Tax=Vi... [more]
A0A7I4C7D6_PHYPA3.100e-3366.67Amino_oxidase domain-containing protein n=1 Tax=Ph... [more]
A0A1Y1HRR9_KLENI3.160e-3367.00Amine oxidase n=1 Tax=Klebsormidium nitens TaxID=1... [more]
A0A7I4C4P7_PHYPA8.820e-3366.67Amino_oxidase domain-containing protein n=3 Tax=Ph... [more]
A0A7S0RH60_9CHLO9.590e-3363.64Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A5J4XCT2_9CHLO2.470e-3267.37Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A5J4XU83_9CHLO2.690e-3164.95Amine oxidase n=1 Tax=Trebouxia sp. A1-2 TaxID=260... [more]
A0A250WSE0_9CHLO9.750e-3162.00Amino_oxidase domain-containing protein n=1 Tax=Ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9624contigD-mesarthrocarpus_Contig9624:2636..3555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LIB3
PFAMsAmino_oxidase
Model size312
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.12e-45
EggNOG OGsCOG1231@1|root,KOG0029@2759|Eukaryota
Descriptionoxidoreductase activity
Cds size312
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791116.488704-CDS-D-mesarthrocarpus_Contig9624:2635..27811680791116.488704-CDS-D-mesarthrocarpus_Contig9624:2635..2781Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9624 2636..2781 -
1680791116.5048509-CDS-D-mesarthrocarpus_Contig9624:3389..35551680791116.5048509-CDS-D-mesarthrocarpus_Contig9624:3389..3555Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9624 3390..3555 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9624.1.1prot_D-mesarthrocarpus_Contig9624.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9624 2636..3555 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9624.1.1

>prot_D-mesarthrocarpus_Contig9624.1.1 ID=prot_D-mesarthrocarpus_Contig9624.1.1|Name=mRNA_D-mesarthrocarpus_Contig9624.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=104bp
MRRSVVVVGGGWAGFGAAKALSESGSCDVTLLDASPNPGGLSSGWRTRGG
RAVEAGIKGFWWSYPNIYRLVEEELKVENPFSDWTRSSFFSPKGLQVCAR
VRF*
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mRNA from alignment at D-mesarthrocarpus_Contig9624:2636..3555-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9624.1.1 ID=mRNA_D-mesarthrocarpus_Contig9624.1.1|Name=mRNA_D-mesarthrocarpus_Contig9624.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=920bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9624:2636..3555- (Discosporangium mesarthrocarpum MT17_79)
ATGAGGAGGTCAGTGGTGGTGGTGGGAGGGGGCTGGGCGGGGTTCGGGGC GGCCAAGGCGCTGTCAGAGTCCGGTTCCTGTGACGTCACGCTACTGGACG CCAGCCCCAACCCAGGGGGGCTGTCATCAGGGTGGAGGACCAGGGGTGGG CGTGCAGTGGAGGCGGGTAAGCTACTTTACAGAGTTGCTGCTGTGCTGCG TACTGCACAGGCGCTATTCCTCCGGGCCGGCAGCCCTGGCTGGAGCTCTG CTCTGGAGCTCTGCCAAGGTCAAATGGCTCTGCGGCTCTCGAGGATGCGG GCTTGATCCTGTGTTGGTTTCTCCCGTTACCCTTCAGCCGTAGTCCTAAT CCTAGCCCTAGCCCCAGCCCCGGCCCTATCCCTGTCCCTAGCCCTCGCCC TACTTTCAAACCTCAACGACTGCCTCGTTGGTCAGGCTATCGTCAGGGGA GGACCAGATGGGGCTGGGGGACAGTGGAGGCGGGCGAGCAAACCCCAGCC CTTACCTGGGCCCCAAATCTGCCCCTACAAACTCAGTAGTTGTGTCTGTG GGGCTGTCCCCAGGGTGGAAGACCAAGTGGGGGTGGGTTATGGAGGCTAC TGGGCCATCCCCAGTCCTAACCCTAACCCAAACCGTGCCCTGGCCATGGT GCAGTTGGCAGTATGGGTTTCCTGTGGCTCAACCTGGTCCTAACCCTAGC TCTGACCCTGACCCTGACCCTGACCCTGACCCTGACCCTTACATTGACCC TTACGTTAACCCTTTCTATGGCAGGGATCAAGGGTTTCTGGTGGTCCTAC CCCAACATCTATCGCCTGGTAGAGGAGGAACTCAAGGTGGAGAACCCGTT CTCGGACTGGACCAGGAGCAGCTTCTTCTCCCCCAAGGGCTTGCAGGTTT GTGCTAGGGTTAGGTTTTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9624:2636..3555-

>mRNA_D-mesarthrocarpus_Contig9624.1.1 ID=mRNA_D-mesarthrocarpus_Contig9624.1.1|Name=mRNA_D-mesarthrocarpus_Contig9624.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=312bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9624:2636..3555- (Discosporangium mesarthrocarpum MT17_79)
ATGAGGAGGTCAGTGGTGGTGGTGGGAGGGGGCTGGGCGGGGTTCGGGGC
GGCCAAGGCGCTGTCAGAGTCCGGTTCCTGTGACGTCACGCTACTGGACG
CCAGCCCCAACCCAGGGGGGCTGTCATCAGGGTGGAGGACCAGGGGTGGG
CGTGCAGTGGAGGCGGGGATCAAGGGTTTCTGGTGGTCCTACCCCAACAT
CTATCGCCTGGTAGAGGAGGAACTCAAGGTGGAGAACCCGTTCTCGGACT
GGACCAGGAGCAGCTTCTTCTCCCCCAAGGGCTTGCAGGTTTGTGCTAGG
GTTAGGTTTTGA
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