mRNA_D-mesarthrocarpus_Contig9612.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9612.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig9612.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9612.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9612contigD-mesarthrocarpus_Contig9612:2100..4675 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1306
Hectar predicted targeting categoryother localisation
Exons4
Cds size1191
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9612.1.2prot_D-mesarthrocarpus_Contig9612.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9612 2206..4666 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791115.3552125-UTR-D-mesarthrocarpus_Contig9612:2099..22051680791115.3552125-UTR-D-mesarthrocarpus_Contig9612:2099..2205Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9612 2100..2205 -
1680791115.416774-UTR-D-mesarthrocarpus_Contig9612:4666..46751680791115.416774-UTR-D-mesarthrocarpus_Contig9612:4666..4675Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9612 4667..4675 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791115.3676414-CDS-D-mesarthrocarpus_Contig9612:2205..24991680791115.3676414-CDS-D-mesarthrocarpus_Contig9612:2205..2499Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9612 2206..2499 -
1680791115.3853662-CDS-D-mesarthrocarpus_Contig9612:2673..28801680791115.3853662-CDS-D-mesarthrocarpus_Contig9612:2673..2880Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9612 2674..2880 -
1680791115.3965874-CDS-D-mesarthrocarpus_Contig9612:3159..34141680791115.3965874-CDS-D-mesarthrocarpus_Contig9612:3159..3414Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9612 3160..3414 -
1680791115.4063885-CDS-D-mesarthrocarpus_Contig9612:4231..46661680791115.4063885-CDS-D-mesarthrocarpus_Contig9612:4231..4666Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9612 4232..4666 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9612.1.2

>prot_D-mesarthrocarpus_Contig9612.1.2 ID=prot_D-mesarthrocarpus_Contig9612.1.2|Name=mRNA_D-mesarthrocarpus_Contig9612.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=397bp
MRSEGVPPNEVSFSSAMTACGRSGRWKEALGLLHRMRRDGVEPNVTNYTA
AADACARSGEWQRAEALLGVMRQRGVRPNAITHNAVITALGRGGEWERAL
GLLRGMSAAPPRGGGVRPNVNSFSAAVTACGDAGQWERALEVLNQMRAEG
IRGDSVVYTAAIDACANGRPPQGAQWQEALGLLEQMREEGVDPTVHSFSA
AITACSKGGQWRRAVGLLGEMQAAGVPPNEVSFNAAINACARAGQWESAV
SLLHDMRALGVCPGTITFNSAIAACGRGGRWELASALLREMTGRKGQGGG
GWGAPPADVVSYGTAIDACTRVGRWEEALAILKELGNDVGATHVGEEGAE
LGPQGGGMQKVVLGPGDISRFESVFDRCANGDIKQRAEVVLTSLKQ*
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mRNA from alignment at D-mesarthrocarpus_Contig9612:2100..4675-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9612.1.2 ID=mRNA_D-mesarthrocarpus_Contig9612.1.2|Name=mRNA_D-mesarthrocarpus_Contig9612.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2576bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9612:2100..4675- (Discosporangium mesarthrocarpum MT17_79)
TTGAACCAGATGAGGTCAGAGGGCGTGCCCCCGAATGAGGTGAGCTTCAG
CTCGGCCATGACAGCCTGCGGGCGCTCTGGGCGGTGGAAGGAGGCCCTGG
GGCTGCTTCACCGCATGCGCCGTGATGGGGTCGAACCCAACGTGACCAAC
TACACGGCGGCCGCAGATGCCTGCGCAAGGTCGGGGGAGTGGCAGCGAGC
CGAGGCATTGCTGGGGGTCATGCGCCAGCGGGGGGTGCGGCCCAACGCCA
TCACACACAACGCGGTCATCACAGCCCTGGGCCGAGGGGGGGAGTGGGAG
CGGGCCCTGGGGCTGCTACGGGGCATGTCGGCAGCCCCGCCACGTGGGGG
CGGGGTGAGGCCGAACGTCAACAGCTTCTCTGCAGCCGTCACGGCTTGTG
GGGATGCTGGGCAGTGGGAGAGGGCACTAGAAGTGCTGAATCAGGTGTGA
GGGGGGGGGGCTTGTTAGACGGGAGCGGTTAAATAATACCCTCTCGCCAC
TGAGAAGGATTTTTATTTTTTTTGTTTGTGTGATTGACATGTAGTAACTG
CCAAGCCCTTGTTGTGCAGAAGAGACTTAACCAACAGAGCCTGCCCCACG
CCGGTCGTGAAGCGGATTGATTGTGTGCGGTGATCTGATGTCTGAGAAGA
ATCATGGCCCTCGGATTGAAATTGTATTGGACGGCAGGACCGCTGTGACA
GAGGTTTTTTGGGGGGGCCAAAAACGTCTGTTTTTTTATATTCATTTGCC
CAGCACACAGGATAGATGGAAGCTCATTGGGTTCCAAGGATTTAGTGGTA
CGGGGGCTAAGGGTTGTGGGGTTGGGGTTGGGGTTAGGGTTATGCCAGCG
GGGAGTGGGCAAGGGTGTGATAGAGATAATGGGCAGGGTTGGGGAGGGAT
GAGGGGAGGTAATCCCCAAGAGTGGAAAAGAGCTCAGAAGGGTTTTGTTA
TTTCTCCTTCCACAACCACCCCAATAGAGCATGAGAGAGTGTCTTCTTAT
TTTTTCTATTCCTCACCCTTGCGCAAAGGGTCTTTTTTCCCTAGGCAAGG
ATCTTGGGCCCAAAAACTCCACCACTGTATGCAAACGTTCGGTAGTTCAC
TGTTTTCTCTTGCAAATTTCAAAAAAAAAAAAAGGAGAGAGAGAAGTGTT
CTGAACATTATGCAGCAGAGATTTTGTACCCCGTTGCCAGTAAACCATCA
TAACCCTTGACCCTGCCCCCACCCTCCCCTGAAAAATGATCCCAAAACAA
AAAAAATAAAGATGCGAGCCGAGGGCATCCGGGGGGACAGCGTGGTCTAC
ACGGCAGCCATCGACGCCTGCGCCAATGGCCGGCCGCCCCAGGGTGCCCA
GTGGCAGGAGGCCCTGGGACTACTGGAGCAGATGCGGGAGGAGGGGGTGG
ACCCCACTGTCCACAGCTTCAGCGCAGCCATAACCGCCTGCAGCAAGGGG
GGGCAGTGGCGCAGAGCGGTGGGGTTGCTGGGGGAGATGCAGGCGGCCGG
GGTGCCCCCCAACGAGGTGGGGGGGGAGGGGGGGGGGGGCCATGCTTGAA
GGGCTGGGCTGGGGAGGAAAAGAAAGAATGCACTCCCCTCCATTGGCTCG
AGGTAGCTCCTGCTACTAGCACACTTTTGAAGCATCCAGCCCCTTCATTA
CAGCAGTGCATTACTCCATACATAGTGCTTTAACTCTTTTTTTTTGTTTC
TAGTGCTTGCCTAAGGGGCCCGTTCGCCTTCTCACACTCACCCCACCCCC
CCCCCCCCGCCGGGTGCATGCATGTATGTATATACCTCCGCCCAGGTGAG
CTTCAACGCGGCAATCAACGCCTGTGCCCGTGCCGGTCAGTGGGAGTCAG
CTGTGTCTCTGCTCCATGATATGCGTGCCTTGGGAGTGTGCCCAGGGACC
ATTACCTTCAACTCGGCCATCGCCGCCTGCGGCAGGGGGGGGCGGTGGGA
GCTGGCCTCTGCCCTCTTGCGGGAGATGACTGGGAGGAAGGGGCAGGGGG
GGGTGCCCGTTCTGCCCCAGTGCACAGGGGGGGAGGTCGGGGGGGCAGGA
ATGGTGGCACCCCAGGGCGCTGAGGGTGACCACAGGAGGCAAATGGTGGG
GCCAGGGCCAGGGCCAGGACCAGGACCACGGGACCGAGTTCCCGGGGTGT
TTAGTAGGGAGGTGGGAGGGGCAAAGGGGGGATGGGGTGCTCCCCCGGCA
GATGTTGTCAGTTACGGGACGGCAATTGATGCCTGCACCAGGGTGGGGAG
GTGGGAAGAGGCCCTGGCAATCCTCAAGGAGCTGGGGAATGATGTTGGAG
CCACGCATGTGGGAGAAGAAGGGGCGGAGCTGGGACCACAGGGGGGTGGA
ATGCAGAAAGTGGTACTTGGACCAGGGGATATTTCTCGCTTTGAGTCCGT
GTTTGACCGCTGTGCCAACGGGGACATAAAGCAGAGGGCAGAGGTGGTGC
TGACCTCACTAAAACAATGAAGGCACTTGCTATGGGGGAGGAGGGGTGGG
CTTCAGGCAGAAGAGTTTTTTTGTTTTTTTTTCAAGTTTAAAGCCCCATG
CCAGGAGGGCAGAGGGGTGTGGTTAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9612:2100..4675-

>mRNA_D-mesarthrocarpus_Contig9612.1.2 ID=mRNA_D-mesarthrocarpus_Contig9612.1.2|Name=mRNA_D-mesarthrocarpus_Contig9612.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1191bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9612:2100..4675- (Discosporangium mesarthrocarpum MT17_79)
ATGAGGTCAGAGGGCGTGCCCCCGAATGAGGTGAGCTTCAGCTCGGCCAT
GACAGCCTGCGGGCGCTCTGGGCGGTGGAAGGAGGCCCTGGGGCTGCTTC
ACCGCATGCGCCGTGATGGGGTCGAACCCAACGTGACCAACTACACGGCG
GCCGCAGATGCCTGCGCAAGGTCGGGGGAGTGGCAGCGAGCCGAGGCATT
GCTGGGGGTCATGCGCCAGCGGGGGGTGCGGCCCAACGCCATCACACACA
ACGCGGTCATCACAGCCCTGGGCCGAGGGGGGGAGTGGGAGCGGGCCCTG
GGGCTGCTACGGGGCATGTCGGCAGCCCCGCCACGTGGGGGCGGGGTGAG
GCCGAACGTCAACAGCTTCTCTGCAGCCGTCACGGCTTGTGGGGATGCTG
GGCAGTGGGAGAGGGCACTAGAAGTGCTGAATCAGATGCGAGCCGAGGGC
ATCCGGGGGGACAGCGTGGTCTACACGGCAGCCATCGACGCCTGCGCCAA
TGGCCGGCCGCCCCAGGGTGCCCAGTGGCAGGAGGCCCTGGGACTACTGG
AGCAGATGCGGGAGGAGGGGGTGGACCCCACTGTCCACAGCTTCAGCGCA
GCCATAACCGCCTGCAGCAAGGGGGGGCAGTGGCGCAGAGCGGTGGGGTT
GCTGGGGGAGATGCAGGCGGCCGGGGTGCCCCCCAACGAGGTGAGCTTCA
ACGCGGCAATCAACGCCTGTGCCCGTGCCGGTCAGTGGGAGTCAGCTGTG
TCTCTGCTCCATGATATGCGTGCCTTGGGAGTGTGCCCAGGGACCATTAC
CTTCAACTCGGCCATCGCCGCCTGCGGCAGGGGGGGGCGGTGGGAGCTGG
CCTCTGCCCTCTTGCGGGAGATGACTGGGAGGAAGGGGCAGGGGGGGGGG
GGATGGGGTGCTCCCCCGGCAGATGTTGTCAGTTACGGGACGGCAATTGA
TGCCTGCACCAGGGTGGGGAGGTGGGAAGAGGCCCTGGCAATCCTCAAGG
AGCTGGGGAATGATGTTGGAGCCACGCATGTGGGAGAAGAAGGGGCGGAG
CTGGGACCACAGGGGGGTGGAATGCAGAAAGTGGTACTTGGACCAGGGGA
TATTTCTCGCTTTGAGTCCGTGTTTGACCGCTGTGCCAACGGGGACATAA
AGCAGAGGGCAGAGGTGGTGCTGACCTCACTAAAACAATGA
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