mRNA_D-mesarthrocarpus_Contig9590.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: A0A0P1A982_PLAHL (Gag-pol polyprotein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A982_PLAHL) HSP 1 Score: 124 bits (311), Expect = 1.650e-29 Identity = 73/180 (40.56%), Postives = 107/180 (59.44%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDGLLTPAGALLDTKFTKQ-YRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYL--KETQDLPLRYGPGKAGGTGFADASYSSESSTSRSISGYVFFMSGAAITGLPRCNPLWHSQRWK 531
+G + LG+++ H R+T TL + Q YI I E F + +C P+T P D L TP A D T YRELVGSL+Y TRPD+A+AV +++ F P +H A +R++ YL +TQD +RYG G++ G+ADAS++S+ + RS+SG+V + G A+T W S+R K
Sbjct: 93 IGKLRYCLGIEVRHDRATRTLELHQRGYIRKIAERFQVADCKPTTIPAD-LNTPLTAKTDAPLTHHPYRELVGSLMYAAICTRPDVAHAVGEVAKFCEMPNKSHWLAARRVLEYLVSTQTQDTTIRYGGGESALDGYADASWTSDLDSRRSVSGFVMLLHGGAVT--------WKSKRQK 263
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: E3RI20_PYRTT (Integrase catalytic domain-containing protein n=1 Tax=Pyrenophora teres f. teres (strain 0-1) TaxID=861557 RepID=E3RI20_PYRTT) HSP 1 Score: 119 bits (297), Expect = 1.760e-26 Identity = 69/171 (40.35%), Postives = 95/171 (55.56%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDGLLTP--AGALLDTKFTKQYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGTGFADASYSSESSTSRSISGYVFFMSGAAITGLPRCNP 507
LG CH++LGM+++ R TL + Q Y+ IL+ F M NCSP+ P G L P AG TK+Y++ +GSL+YL+ TRPDIA+ V LS + + P H A K L RYLK T +L L Y G+ DA + S+ T RS +GY F + A I+ + P
Sbjct: 529 LGECHYYLGMEIIRDRPNRTLRLSQAGYLAKILQDFGMANCSPNAVPMSGNLCPGPAGFQASKLDTKRYQKAIGSLMYLMLGTRPDIAFTVGCLSRYMSNPADIHHAAVKHLWRYLKGTSNLTLVYHGDLKPLQGYTDADWGSDPDTRRSTAGYAFNLGSAVISWSSKRQP 699
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: A0A0D9NHJ8_METAN (Uncharacterized protein n=1 Tax=Metarhizium anisopliae BRIP 53293 TaxID=1291518 RepID=A0A0D9NHJ8_METAN) HSP 1 Score: 110 bits (274), Expect = 4.120e-26 Identity = 67/164 (40.85%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAP--GDGLLTPAGALLDTKFTKQYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGTGFADASYSSESSTSRSISGYVFFMSGAAIT 486
LG C ++LGM + R T+ + Q YI +L+ F M P P D + TP G + Y + +GSL+Y + TRPDIAYAV S F KPT AH A KR++RYLK T DL L Y TGF D+ ++ + T RS SGYVF + AI+
Sbjct: 4 LGHCSYYLGMTVARDRKNRTIRLSQKGYIEKVLKDFGMCEAKPQYTPMKTDQIETPEGYEPTDEIKTWYAKAIGSLMYAMLGTRPDIAYAVSYCSRFLAKPTEAHRAAVKRIMRYLKATIDLCLVYEGEIEPLTGFTDSDWAGDRETRRSTSGYVFNLGSGAIS 167
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: A0A0F7ZXE1_9HYPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F7ZXE1_9HYPO) HSP 1 Score: 114 bits (284), Expect = 1.270e-25 Identity = 77/220 (35.00%), Postives = 105/220 (47.73%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAP--GDGLLTPAGALLDTKFTKQYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGTGFADASYSSESSTSRSISGYVFFMSGAAITGLPRCNPLWHSQRWKLSTLP-------WRTQRRGPSTWAILQGARIAAVQDNPHSP 633
LG C H+LGM + R T+ + Q YI +L+ F M P P D + TP + Y + +GSL+Y + TRPDIAYAV S F KPT AH TA KR++RYLK T DL L Y TGF D+ ++ + T RS SGYVF + AI+ W S+R + L +TQ + W + ++ H+P
Sbjct: 94 LGPCSHYLGMTVTRDRRNRTIRLSQKGYIEKVLKDFGMCEAKPQYTPMTTDRIETPVDYEPTDEIKTWYAKAIGSLMYAMLGTRPDIAYAVSYCSRFLAKPTEAHRTAAKRIMRYLKATIDLCLVYEGEIEPLTGFTDSDWAGDRDTRRSTSGYVFNLGSGAIS--------WSSKRQSSTALSSCEAEYIGQTQATKEAIWLRRLLTELQVAEEEGHAP 305
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 108 bits (270), Expect = 4.100e-24 Identity = 65/172 (37.79%), Postives = 98/172 (56.98%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDGLLTPAGALLDTKFTKQY--RELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGT-GFADASYSSESSTSRSISGYVFFMSGAAITGLPRCNP 507
LG + LG+++ +R T+++ Q YI + E F + C P D D F +Y RELVG+L+YL T TRPDIA AV +++ F + +H A KR+++YLK TQDL L + G G G+ADA+++ + T RS +GYVFF++G+AI+ + P
Sbjct: 26 LGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQP 197
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 110 bits (274), Expect = 4.500e-24 Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDG---LLTPAGALLDTKFTKQY--RELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGT-GFADASYSSESSTSRSISGYVFFMSGAAITGLPRCNP 507
LG + LG+++ +R T+++ Q YI + E F + C P D L+ PA D F +Y RELVG+L+YL T TRPDIA AV +++ F + +H A KR+++YLK TQDL L + G G G+ADAS++ + T RS +GYVFF++G+AI+ + P
Sbjct: 122 LGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAE---DEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGELIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQP 293
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: A0A060SQS6_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SQS6_PYCCI) HSP 1 Score: 110 bits (274), Expect = 4.600e-24 Identity = 62/176 (35.23%), Postives = 101/176 (57.39%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDGLLTPAGALLDTK---------FTKQYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRY-GPGKAGGTGFADASYSSESSTSRSISGYVFFMSGAAITGLPR 498
LG FLG+ + H R+ + + Q YI +++E F+M +C P+ P PAGA+L++ F ++Y+ L+GSL+Y TRPDI +AV +LS + + P+ AH K ++RYL+ T+ L LRY G G ++D+ ++ + +SI+G+VF M+G AI+ R
Sbjct: 119 LGAVKRFLGLRISHDRTIRRIEIDQEEYIQSVIERFDMADCKPARTP-----LPAGAVLESSKQPKPASDSFRQRYQSLIGSLLYAALGTRPDIDFAVNKLSKYNSNPSEAHWHYAKYVLRYLQGTKQLRLRYDGASNDGLLSYSDSDWAEDRDDRKSITGFVFLMTGGAISWASR 289
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: A0A7R9YVL0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YVL0_9CHLO) HSP 1 Score: 109 bits (273), Expect = 7.480e-24 Identity = 64/169 (37.87%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAP---GDGLLTPAGALLDTKFTKQYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYG--PGKAGG---TGFADASYSSESSTSRSISGYVFFMSGAAI 483
LG FLG+ + +R T+ + Q RY +LE F M +C P P G L AG LD + + E++GSL+YL T TRPDI++AV L+ F PT HL K ++RY++ + + +G PG AG GF D+ + + T RS +GYVF ++G AI
Sbjct: 128 LGEATFFLGLKIKRNRELRTITLSQKRYSTDVLERFGMSDCKPKPQPFSSGTKLSKAAGTPLDPELKLCFMEIIGSLMYLATCTRPDISHAVCTLARFMAAPTYLHLEHAKHVLRYIRSSSSQGITFGVPPGGAGAHSLLGFCDSDWGGDFETKRSTTGYVFILNGGAI 296
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: UPI001CDC2DB1 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDC2DB1) HSP 1 Score: 107 bits (266), Expect = 1.110e-23 Identity = 71/180 (39.44%), Postives = 105/180 (58.33%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDGLLT--PAGALLDTKFTK--QYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGTGFADASYSSESSTSRSISGYVFFMSGAAITG--LPRCNPLWHSQ 522
LG ++ LG+++ +++ + + QT YIN +LE FNM C P P + L + + K + +Y+EL+GSL+YL T TRPDI +AV LS F NK H TAGKR++RYL+ T+D+ L+Y K GF DA + + RS +GY F +S AI+ L R NP+ H++
Sbjct: 55 LGKANYCLGLEIK--QNSEEITIGQTEYINDVLERFNMDKCKPVKTPIEKNLQFDHHKGVNEQKLHEGHKYQELIGSLMYLATSTRPDIMFAVNFLSQFNNKNDERHWTAGKRVLRYLQGTKDVVLKYKNNKKPLEGFVDADWGQCTQDRRSYTGYTFILSCGAISAQELAR-NPVHHAK 231
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Match: A0A507DKM5_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DKM5_9FUNG) HSP 1 Score: 108 bits (269), Expect = 1.430e-23 Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 1 LGGCHHFLGMDMLHHRSTGTLLVKQTRYINAILEHFNMINCSPSTAPGDGLLTPAGALLDTKFTK-----QYRELVGSLIYLVT*TRPDIAYAVMQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGTGFADASYSSESSTSRSISGYVFFMSGA 477
LG +H+LGM + S + + Q Y+N ILE F M +C P P D + +TK + +YR++VGSL+YL+ TRPDIA AV LS F + P+ HL A KR++RYL+ T D L G G++DA + + RSI+GY+F++ A
Sbjct: 81 LGEVNHYLGMRVRRDYSRHVIYLDQESYVNDILERFGMQDCKPVNTPMDRTKLEPYEVENTKTSPNPQEGEYRKIVGSLVYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSDYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFYIGNA 244 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9590.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9590.1.1 >prot_D-mesarthrocarpus_Contig9590.1.1 ID=prot_D-mesarthrocarpus_Contig9590.1.1|Name=mRNA_D-mesarthrocarpus_Contig9590.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=162bp MQLSLFQNKPTTAHLTAGKRLIRYLKETQDLPLRYGPGKAGGTGFADASYback to top mRNA from alignment at D-mesarthrocarpus_Contig9590:2339..3176+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9590.1.1 ID=mRNA_D-mesarthrocarpus_Contig9590.1.1|Name=mRNA_D-mesarthrocarpus_Contig9590.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=838bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9590:2339..3176+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9590:2339..3176+ >mRNA_D-mesarthrocarpus_Contig9590.1.1 ID=mRNA_D-mesarthrocarpus_Contig9590.1.1|Name=mRNA_D-mesarthrocarpus_Contig9590.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=486bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9590:2339..3176+ (Discosporangium mesarthrocarpum MT17_79)back to top |