mRNA_D-mesarthrocarpus_Contig9570.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9570.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9570.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9570.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9570contigD-mesarthrocarpus_Contig9570:47..1872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1432
Hectar predicted targeting categoryother localisation
Exons3
Cds size1341
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791111.7082844-UTR-D-mesarthrocarpus_Contig9570:46..1321680791111.7082844-UTR-D-mesarthrocarpus_Contig9570:46..132Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9570 47..132 -
1680791111.7622433-UTR-D-mesarthrocarpus_Contig9570:1867..18721680791111.7622433-UTR-D-mesarthrocarpus_Contig9570:1867..1872Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9570 1868..1872 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791111.7222042-CDS-D-mesarthrocarpus_Contig9570:132..9761680791111.7222042-CDS-D-mesarthrocarpus_Contig9570:132..976Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9570 133..976 -
1680791111.732673-CDS-D-mesarthrocarpus_Contig9570:1130..13741680791111.732673-CDS-D-mesarthrocarpus_Contig9570:1130..1374Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9570 1131..1374 -
1680791111.748132-CDS-D-mesarthrocarpus_Contig9570:1614..18671680791111.748132-CDS-D-mesarthrocarpus_Contig9570:1614..1867Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9570 1615..1867 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9570.1.1prot_D-mesarthrocarpus_Contig9570.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9570 133..1867 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9570.1.1

>prot_D-mesarthrocarpus_Contig9570.1.1 ID=prot_D-mesarthrocarpus_Contig9570.1.1|Name=mRNA_D-mesarthrocarpus_Contig9570.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=447bp
MEPPGQGETATPSPIDSARALEEALTVCKRVSNGNCGEDDLSSVATTLVS
VCRRDFEEAKTVAVRTQLLRAVCLPLLRESYNDDDIPGRAAATALLRAVS
WDLFELVLPFVSEEGRRSEFEGGGKLADGSSFPWAEKLLAEMAETCSPRE
LHIMALEQLPVDHTRRQLRAILLVLRRSLQRLPTTQRARFLEGTLQPVLD
RLATLARPIKGKSWLGGGDDGEISDGDGGIGEGSNNDVKEEETEGMDDCP
ATLTFGGPSALDNAVLAGNEAAAFAGPLLEQALRERAQMKIGDTAAANQN
VAGLAGLLLWALNLVLKLTPTAWQGRAGEVNSIIERLVELILCNPLFDLQ
YVLEQRCRLAYRAWEHAKKNSNGKEEKGAKEKRGRSGSRLGDLTVSGSLP
WPSDGVAALAYLVGVAALAYLVGVAAWAYLVGVAALAYLVGVPAGP*
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mRNA from alignment at D-mesarthrocarpus_Contig9570:47..1872-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9570.1.1 ID=mRNA_D-mesarthrocarpus_Contig9570.1.1|Name=mRNA_D-mesarthrocarpus_Contig9570.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1826bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9570:47..1872- (Discosporangium mesarthrocarpum MT17_79)
GCAGAATGGAACCACCGGGGCAGGGCGAGACTGCAACCCCAAGCCCTATA
GATTCTGCCCGGGCGCTGGAGGAAGCTCTGACGGTCTGCAAACGTGTCTC
AAATGGGAACTGCGGTGAAGATGACCTCAGTTCAGTGGCCACCACTCTTG
TATCCGTGTGCAGACGAGACTTCGAAGAAGCGAAGACCGTGGCTGTGCGA
ACGCAGTTACTTCGAGCAGTTTGTCTTCCTCTACTCCGGGAGAGCTATAA
TGATGACGGTGGGGACAGGGGATAGGAACTCTTGATAATCATGGCTCAGG
AACGATACAGACGATGTTTTGCGTAGAGCCTTCTCGAAGACACTGAAGCT
CAGGACTTCAAGTGATCCCACTACAATCACATGGCAAGGACTGTACAAAA
AAATTTCATCGTGCAGAGACTCTGCCTACCTATTCGACACGGAATCATGG
CATTGACATTGTCTTAAGCACTTCTCACTACCTTCCCTTGCCAACCAGAC
ATCCCAGGACGGGCTGCTGCCACAGCCCTCCTCCGCGCCGTGTCGTGGGA
CCTTTTCGAGCTAGTTTTGCCCTTTGTGTCCGAGGAAGGACGGCGCTCGG
AGTTTGAGGGTGGTGGAAAATTGGCAGATGGCTCTTCTTTTCCTTGGGCG
GAAAAGTTGCTGGCTGAGATGGCGGAGACTTGCAGTCCCCGCGAGCTCCA
CATCATGGCTCTAGAGCAATTGCCAGTTGACCACACGCGCAGGTGGGGTG
ATGGGCTTCTGAGCCTAAACTCCTCCTCCTACGCGGCGCACGCTCACTCT
GGTCGGCACTACACCGAAAGGAGAATGTGATCCATGACGAATTTGCTTTC
CTTTACTAGAGCTCGATGCCCACCCTTGCCAACGTGTTTTTGCTAGGCAG
CTTCGTGCAATACTGCTGGTGTTGCGGCGAAGCTTGCAGCGCCTGCCCAC
AACTCAGCGGGCCCGTTTTCTGGAGGGGACCCTCCAGCCTGTTCTTGATA
GGCTCGCCACTCTTGCGAGGCCTATCAAGGGCAAGTCTTGGCTTGGGGGA
GGAGATGATGGGGAGATCAGCGACGGCGATGGCGGCATTGGTGAAGGTAG
CAATAATGATGTCAAGGAGGAAGAGACTGAAGGGATGGATGATTGCCCAG
CCACTCTGACTTTTGGGGGGCCTTCTGCCCTTGACAATGCGGTCCTTGCT
GGCAATGAAGCCGCGGCATTTGCTGGACCCCTTCTGGAGCAGGCCCTCAG
AGAACGGGCACAAATGAAGATTGGGGACACCGCTGCAGCCAACCAGAATG
TCGCAGGGCTTGCGGGCTTGCTCCTGTGGGCACTCAACCTAGTCTTGAAG
CTCACTCCGACGGCCTGGCAGGGAAGAGCGGGGGAGGTCAACAGCATCAT
CGAGCGACTGGTGGAGCTAATCCTTTGCAACCCACTCTTTGACCTCCAGT
ATGTGCTGGAGCAGAGGTGCCGACTAGCATACAGGGCCTGGGAGCATGCG
AAGAAAAACAGCAATGGGAAAGAGGAGAAAGGAGCAAAGGAGAAGCGCGG
CCGGTCGGGGTCTCGGTTGGGGGACCTCACGGTCTCGGGCTCTCTGCCGT
GGCCCTCTGATGGTGTTGCCGCTTTGGCGTATCTGGTGGGTGTCGCCGCT
TTGGCGTATCTGGTGGGTGTTGCCGCTTGGGCGTATCTGGTGGGTGTTGC
CGCTTTGGCGTATCTGGTGGGTGTGCCGGCTGGCCCGTGACGTGTTGAGT
GGCCTACTTGGAGGTGCTAGGAGGTGCTAGGAGGTGCTATTTTCTGCAAC
TCACAGCTTCTTTTTTTTTTTTTTTT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9570:47..1872-

>mRNA_D-mesarthrocarpus_Contig9570.1.1 ID=mRNA_D-mesarthrocarpus_Contig9570.1.1|Name=mRNA_D-mesarthrocarpus_Contig9570.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1341bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9570:47..1872- (Discosporangium mesarthrocarpum MT17_79)
ATGGAACCACCGGGGCAGGGCGAGACTGCAACCCCAAGCCCTATAGATTC
TGCCCGGGCGCTGGAGGAAGCTCTGACGGTCTGCAAACGTGTCTCAAATG
GGAACTGCGGTGAAGATGACCTCAGTTCAGTGGCCACCACTCTTGTATCC
GTGTGCAGACGAGACTTCGAAGAAGCGAAGACCGTGGCTGTGCGAACGCA
GTTACTTCGAGCAGTTTGTCTTCCTCTACTCCGGGAGAGCTATAATGATG
ACGACATCCCAGGACGGGCTGCTGCCACAGCCCTCCTCCGCGCCGTGTCG
TGGGACCTTTTCGAGCTAGTTTTGCCCTTTGTGTCCGAGGAAGGACGGCG
CTCGGAGTTTGAGGGTGGTGGAAAATTGGCAGATGGCTCTTCTTTTCCTT
GGGCGGAAAAGTTGCTGGCTGAGATGGCGGAGACTTGCAGTCCCCGCGAG
CTCCACATCATGGCTCTAGAGCAATTGCCAGTTGACCACACGCGCAGGCA
GCTTCGTGCAATACTGCTGGTGTTGCGGCGAAGCTTGCAGCGCCTGCCCA
CAACTCAGCGGGCCCGTTTTCTGGAGGGGACCCTCCAGCCTGTTCTTGAT
AGGCTCGCCACTCTTGCGAGGCCTATCAAGGGCAAGTCTTGGCTTGGGGG
AGGAGATGATGGGGAGATCAGCGACGGCGATGGCGGCATTGGTGAAGGTA
GCAATAATGATGTCAAGGAGGAAGAGACTGAAGGGATGGATGATTGCCCA
GCCACTCTGACTTTTGGGGGGCCTTCTGCCCTTGACAATGCGGTCCTTGC
TGGCAATGAAGCCGCGGCATTTGCTGGACCCCTTCTGGAGCAGGCCCTCA
GAGAACGGGCACAAATGAAGATTGGGGACACCGCTGCAGCCAACCAGAAT
GTCGCAGGGCTTGCGGGCTTGCTCCTGTGGGCACTCAACCTAGTCTTGAA
GCTCACTCCGACGGCCTGGCAGGGAAGAGCGGGGGAGGTCAACAGCATCA
TCGAGCGACTGGTGGAGCTAATCCTTTGCAACCCACTCTTTGACCTCCAG
TATGTGCTGGAGCAGAGGTGCCGACTAGCATACAGGGCCTGGGAGCATGC
GAAGAAAAACAGCAATGGGAAAGAGGAGAAAGGAGCAAAGGAGAAGCGCG
GCCGGTCGGGGTCTCGGTTGGGGGACCTCACGGTCTCGGGCTCTCTGCCG
TGGCCCTCTGATGGTGTTGCCGCTTTGGCGTATCTGGTGGGTGTCGCCGC
TTTGGCGTATCTGGTGGGTGTTGCCGCTTGGGCGTATCTGGTGGGTGTTG
CCGCTTTGGCGTATCTGGTGGGTGTGCCGGCTGGCCCGTGA
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