mRNA_D-mesarthrocarpus_Contig957.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: D8LMQ2_ECTSI (Rab8E, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ2_ECTSI) HSP 1 Score: 189 bits (479), Expect = 5.000e-50 Identity = 98/190 (51.58%), Postives = 135/190 (71.05%), Query Frame = 1
Query: 1 MTRFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDP-RVQTCLVGNKVDLRESHGL-GRET-----VESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTWFVKPPTPSSYKAKSKGRIRRTFGHRRNKK 549
M RF +D F++ V T+GVDFK K + +N+EEV +QVWDTAGQ++FHKIT+AYYRGSHGIVLVYD+++P +L+N YWM++IRD + RVQ CLVGNKVDLRE GL G++ VE+ G+++A +++FECSAKTG VE+AF + K + VKP TPS+ RIRR G +++++
Sbjct: 70 MDRFMEDYFSITKVQTLGVDFKLKTIVLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDMSDPKTLDNTAYWMRSIRDTAGSNRVQICLVGNKVDLREEVGLEGQQQDLAGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEAHLVKPSTPST-------RIRRRLGRKKHRR 252
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE) HSP 1 Score: 186 bits (471), Expect = 7.990e-48 Identity = 97/192 (50.52%), Postives = 134/192 (69.79%), Query Frame = 1
Query: 1 MTRFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDP-RVQTCLVGNKVDLRESHGLGRET--------VESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTWFVKPPTPSSYKAKSKGRIRRTFGHRRNKK 549
M RF +D F++ V T+GVDFK K + +N+EEV +QVWDTAGQ++FHKIT+AYYRGSHGIVLVYD+++P +L+N YWM++IRD + RVQ CL+GNKVDLRE +GRE VE+ G+++A +++FECSAKTG VE+AF + K + VKP TPS+ RIRR G +++++
Sbjct: 960 MDRFMEDYFSITKVQTLGVDFKLKTIFLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDISDPKTLDNTAYWMRSIRDTAGSNRVQICLIGNKVDLREE--VGREEQQQDLSGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEAHLVKPSTPST-------RIRRRPGRKKHRR 1142
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: H6WB87_VAULI (Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB87_VAULI) HSP 1 Score: 170 bits (431), Expect = 2.130e-44 Identity = 91/171 (53.22%), Postives = 111/171 (64.91%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLR---------------ESHGLGRET--------VESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKV 450
RFTDD F V TVGVDFK + M V E++TVQVWDTAGQERFHKIT+AYY G GI+L YDV P +LENI YW+KNIRDN+ V+TCLVGNK DL+ G GR+ VE+++GQQIA + +FFE SAKTG NV +AF S+++ V
Sbjct: 274 RFTDDTFHAGMVGTVGVDFKIRTMEVLGEKITVQVWDTAGQERFHKITRAYYHGCQGILLAYDVGEPGTLENISYWIKNIRDNASKDVRTCLVGNKADLKVRAISPYQLNWCVSASPQGSGRKRSWECPPVQVETESGQQIAEEYGVNFFEASAKTGYNVNEAFLSLLEGV 444
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: A0A7J6L878_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6L878_PEROL) HSP 1 Score: 155 bits (392), Expect = 7.190e-42 Identity = 70/152 (46.05%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRESHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTW 462
RF ++ F N V T+GVDF+ K + + + EV +Q+WDTAGQERF IT AYYR + G++L+YD+T+P S +N+DYW++N+ +++D VQ LVGNK D+ + V ++ GQ +A+++ FFE SAK+G+NVE AF +I ++VCD++
Sbjct: 43 RFCENRFDSNFVITIGVDFRVKTINIQDREVRLQIWDTAGQERFRTITPAYYRNAMGVLLIYDMTDPKSFKNVDYWVRNLDEHADKTVQKLLVGNKADM-----AAKRKVSTEAGQALADKYGMAFFETSAKSGLNVEQAFRAIAERVCDSY 189
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: A0A7J6LHD6_PEROL (Uncharacterized protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6LHD6_PEROL) HSP 1 Score: 155 bits (392), Expect = 2.990e-41 Identity = 70/152 (46.05%), Postives = 108/152 (71.05%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRESHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTW 462
RF ++ F N V T+GVDF+ K + + + EV +Q+WDTAGQERF IT AYYR + G++L+YD+T+P S +N+DYW++N+ +++D VQ LVGNK D+ + V ++ GQ +A+++ FFE SAK+G+NVE AF +I ++VCD++
Sbjct: 43 RFCENRFDSNFVITIGVDFRVKTINIQDREVRLQIWDTAGQERFRTITPAYYRNAMGVLLIYDMTDPKSFKNVDYWVRNLDEHADKTVQKLLVGNKADM-----AAKRKVSTEAGQALADKYGMAFFETSAKSGLNVEQAFRAIAERVCDSY 189
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: A0A835YLY5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY5_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.610e-41 Identity = 90/194 (46.39%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 1 MTRFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRE------------------------------SHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQ---KVCDTWFVKPPTP 483
M RFT+D+F V TVGVDFK + + + E V VQVWDTAGQERFHKIT+AYYRGSHGI+L YDV P++LENI YW+ NI+DN+ V TCLVGNK+DLR S V + +G+ IA ++ FFE SAKTG NV AF S+V+ + D P TP
Sbjct: 19 MNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAFVSLVESALEAADAGCGPPTTP 212
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: UPI00193A3852 (ras-related protein Rab-10-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A3852) HSP 1 Score: 152 bits (383), Expect = 1.980e-40 Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRESHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTWFVKP------PTPSSYKAKSKG 510
RF+DD F +ST+G+DFK K + +N +++ +Q+WDTAGQERFH IT +YYRG++GI+LVYD+TNP S +NI W++NI +++ V+ L+GNK D+ E + +E G+QIA H F+E SAK +N+E AF ++ + K P P S K +SKG
Sbjct: 28 RFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQIWDTAGQERFHTITTSYYRGANGIMLVYDITNPKSFDNISKWLRNIEEHASEDVERMLLGNKCDMEEKRMISKER-----GEQIAREHGIKFYETSAKNNINIEKAFMTLATDILHKTPNKESDGGASPFPPSQKQQSKG 196
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: A0A444YNZ3_ARAHY (Uncharacterized protein n=3 Tax=Arachis TaxID=3817 RepID=A0A444YNZ3_ARAHY) HSP 1 Score: 150 bits (378), Expect = 2.020e-39 Identity = 76/165 (46.06%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRESHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTWFVKPPTPSSYKAK 501
RFTDD FT + ++T+G+DFK + + ++ + + +Q+WDTAGQERF IT AYYRG+ GI+LVYD+T+ SS ENI W++NI +++ V LVGNK D+ ES + V + GQ +AN + FFE SAKT +NVE F SI ++V + P P S K
Sbjct: 36 RFTDDTFTTSFITTIGIDFKIRTLELDGKRIKLQIWDTAGQERFRTITSAYYRGAMGILLVYDITDESSFENIRNWIRNIEEHASDNVNRILVGNKADMDES----KRVVPTSRGQALANEYGIKFFETSAKTNLNVEKIFLSISREVKHRLSDRGPKPESQTVK 196
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: A0A3Q3EKQ8_KRYMA (RAB13, member RAS oncogene family n=19 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q3EKQ8_KRYMA) HSP 1 Score: 148 bits (374), Expect = 4.250e-39 Identity = 71/156 (45.51%), Postives = 104/156 (66.67%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRESHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTWFVKP 474
RF +D+F +ST+G+DFK K + V+ ++V +QVWDTAGQERF IT AYYRG+ GI+LVYD+T+ S ENI WMK+I++N+ V L+GNK D+ + +ET G+++A H FFE SAK+ +NVE++F ++ Q++ KP
Sbjct: 27 RFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDGKSFENIQNWMKSIKENASAGVSRMLLGNKCDIEPKRKVSKET-----GEKLAKEHGIRFFETSAKSSINVEESFQALAQEILQKSTKKP 177
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Match: UPI0011C3CE41 (ras-related protein Rab-13 isoform X1 n=2 Tax=Calypte anna TaxID=9244 RepID=UPI0011C3CE41) HSP 1 Score: 148 bits (374), Expect = 4.380e-39 Identity = 72/164 (43.90%), Postives = 111/164 (67.68%), Query Frame = 1
Query: 7 RFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITKAYYRGSHGIVLVYDVTNPSSLENIDYWMKNIRDNSDPRVQTCLVGNKVDLRESHGLGRETVESQNGQQIANRHSSDFFECSAKTGVNVEDAFDSIVQKVCDTWFVKPPTPSSYKA 498
RF +D+FT +ST+G+DFK + + ++ +++ +QVWDTAGQERF IT AYYRG+ GI+LVYD+T+ S +NI WMK+I++N+ V+ L+GNK D+ GR V+ ++ +++A H FFE SAK+ +NVE+AF S+ + + K TP++ KA
Sbjct: 27 RFAEDNFTSTYISTIGIDFKIRTVDIDGKKIKLQVWDTAGQERFKTITTAYYRGAVGIILVYDITDEKSFQNIQNWMKSIKENASAGVERLLLGNKCDME-----GRRKVQREDAEKLAKEHGIRFFETSAKSSINVEEAFSSLARDILQKSSRKA-TPNTSKA 184 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig957.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig957.4.1 >prot_D-mesarthrocarpus_Contig957.4.1 ID=prot_D-mesarthrocarpus_Contig957.4.1|Name=mRNA_D-mesarthrocarpus_Contig957.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=416bp MTRFTDDDFTLNTVSTVGVDFKWKLMTVNEEEVTVQVWDTAGQERFHKITback to top mRNA from alignment at D-mesarthrocarpus_Contig957:6611..12093+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig957.4.1 ID=mRNA_D-mesarthrocarpus_Contig957.4.1|Name=mRNA_D-mesarthrocarpus_Contig957.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5483bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig957:6611..12093+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig957:6611..12093+ >mRNA_D-mesarthrocarpus_Contig957.4.1 ID=mRNA_D-mesarthrocarpus_Contig957.4.1|Name=mRNA_D-mesarthrocarpus_Contig957.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1248bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig957:6611..12093+ (Discosporangium mesarthrocarpum MT17_79)back to top |