mRNA_D-mesarthrocarpus_Contig956.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig956.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig956.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 5.010e-126
Identity = 196/306 (64.05%), Postives = 240/306 (78.43%), Query Frame = 2 
Query:  377 GNGVLGGVNLQLMRILITGEAIVGAAAAVLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAFTEACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEVNMKGPVEQDTLGGR-VGRVSKEFGLSPKFVNMAFSVFKQLDLDGNGSIDQQELKLGLRTFGKFTSDEEIRVIMCQADVDGNNVLSFDEFVRLLAINYSYLLKP 1291
            G+G+L G NL+LMRIL+ GE  VG AAA LAF  ++N F    FS   L  G LGALPIF  SV LE+SGVDFFRKIDQDTKLYV+Q+FGAKRN+P V LWS +LA +AG FEE LFRGVIQ+ L   +G  P+LV++S+LFG AHSPVPGA++FTEACYGANFGLLY++SGGNL+VP +AHV+YD+LTFLEVH RAT  +E  ++G + Q     R V  V K+F LS KFV+M++ +F+QLDLD NG IDQ+EL+LGLRTFGKF S EE R IM +AD+D NN L+FDE+VRLLA+NYS LL+P
Sbjct:   78 GSGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQP 383
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA)

HSP 1 Score: 263 bits (672), Expect = 2.240e-80
Identity = 145/304 (47.70%), Postives = 196/304 (64.47%), Query Frame = 2 
Query:  389 LGGVNLQLMRILITGEAIVGAAAAVLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAFTEACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEVNMKG----PVEQDTLGG---------RVGRVSKEFGLSPKFVNMAFSVFKQLDLDGNGSIDQQELKLGLRTFGKFTSDEEIRVIMCQADVDGNNVLSFDEFVRLL 1261
            L GVN  L+R L+ GE  V A AAV+A F  IN       S   +   +  A+PIF  SV LERS +  F++ID+DT+L+V+QIFGAKR+  ++   ++I+A SAG+ EE LFRG+IQ  L   +G  P+L+VASLLFG AH+PVPGA++  EA YG  FG LYI +GGNL  P ++H +YDL TF+EVH+RAT  I V   G    P       G         RV  V K +GL   FV  A  VF  LDLD NG++D++EL+LG+RTFG+FT+DE++  I  +AD++ +  +SFDEF++LL
Sbjct:   21 LSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSNYIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A0G4EAR4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAR4_VITBC)

HSP 1 Score: 198 bits (503), Expect = 7.030e-55
Identity = 117/287 (40.77%), Postives = 167/287 (58.19%), Query Frame = 2 
Query:  401 NLQLMRILITGEAIVGAAAAVLAFFAQ-INLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAG-PS-LVVASLLFGFAHSPVPGANAFTEACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEVNMKGPVEQDTLGGRVGRVSKEFGLSPKFVNMAFSVFKQLDLDGNGSIDQQELKLGLRTFGKFTSDEEIRVIMCQADVDGNNVLSFDEFV 1252
            NLQL+   + GEA++ AA    A+F   ++ F         +  GVL +LP+ A    L+      F+KID+DTK  VL +FG + N P+V L ++ LA +AG  EEALFRG +      PL  G PS L+++S LFG AHSPVPGA+AF EA YG  FG++Y ++ GN+ VP +AH  YD +TFL VH RAT  ++  +   V  + L  R   +     L  +F   A + F+ LDLDG+G I ++EL+LGLR F     DE++  +    D DG+  + F+EF+
Sbjct:   89 NLQLVASFVIGEALLAAATFGTAYFVPFLDPFFGSHLDQEAVVQGVLWSLPLVAFGFLLDNLPWKIFKKIDRDTKFLVLALFGKEANLPTVALLAATLAGAAGFAEEALFRGTLLPLFNLPLFGGFPSGLLISSFLFGVAHSPVPGADAFLEAVYGLWFGVIYYMADGNIWVPMIAHAFYDFVTFLWVHVRATSRVK-QLTESVSPEAL--REMEMQVRESLPAEFARFAKATFQMLDLDGSGGITKEELRLGLRVFSNRLRDEDVDNLFAAMDRDGSGQIDFNEFL 372
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A7S0HFR6_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HFR6_9CRYP)

HSP 1 Score: 93.2 bits (230), Expect = 2.640e-17
Identity = 73/258 (28.29%), Postives = 119/258 (46.12%), Query Frame = 2 
Query:  533 VLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLG-AGP-----SLVVASLLFGFAHSPVPGA---NAFT---EACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEVNMKGPVEQDTLGGRVGRVSKEFGLSPKFVNMAFSVFKQLDLDGNGSIDQQELKLGLRTFGKFTSDEEIRVIMCQADVDGNNVLSFDE---FVRLL 1261
            + G+LPI      +  S    F  I+  T +  L++FG+K+N    F  S+IL    G+ EE  FR +    L    G AG       L+ +SL+FG AH  + G+   NA     +   G  FG+LY+LSG NL+VP   H +YD  T ++ H  +T  ++   +       L   +G+   E  +  + +  +  +F   D   +G +   E++  ++  G    D  +  +  QAD + ++ L  DE   FV LL
Sbjct:   33 IAGSLPILYLGNKIATSDAKTFIDINFSTNILALKLFGSKKNLLYTFGVSAILGTITGLCEELSFRALGLPILARRFGEAGDPNILLGLLASSLVFGLAHWSIGGSWKDNAVVVPLQILTGFWFGILYVLSGFNLLVPAGVHAIYDAYTLIDAHRTSTSQLQYAQERSSSAKFL--PIGQTD-EGNMQERIIQNSRLIFYLADTSRDGILQLAEIRAAIQQLGYRPDDSLLVSLFKQADNNSDDALDLDEWNVFVELL 287
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: UPI00036209A2 (CPBP family intramembrane metalloprotease n=1 Tax=Thioalkalivibrio sp. ALJT TaxID=1158146 RepID=UPI00036209A2)

HSP 1 Score: 87.8 bits (216), Expect = 3.020e-16
Identity = 64/173 (36.99%), Postives = 92/173 (53.18%), Query Frame = 2 
Query:  455 AAVLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAFTEACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATG 973
            A +LA FA I L D L +S     LG L  LP+ A    L  SG   +RK++Q  + +V Q+F      P   L  SILA   GV EE L RGV+Q +L+   G   +++VA+L+FG AH  +     F     G   G+LY ++G NL+V  V H +YD +  + ++ R+ G
Sbjct:   26 ALILARFAGIPLADQLHWSLEAATLGALAVLPMLALLAVLAASGWAPYRKLEQQVRGFVRQLFHGA--LPGAVLLLSILA---GVGEELLVRGVLQGWLETRWGPVSAILVAALVFGLAHG-ISRFYFFFATLVGLYLGVLYHITG-NLLVVIVTHALYDWIV-IHLYLRSRG 190
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A7S4NY07_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NY07_GUITH)

HSP 1 Score: 88.6 bits (218), Expect = 1.590e-15
Identity = 68/211 (32.23%), Postives = 99/211 (46.92%), Query Frame = 2 
Query:  401 NLQLMRILITGEAIVGAAAA----VLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLG-AGP-----SLVVASLLFGFAHSPVPGA---NAFT---EACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEV 985
            NL L   L+  +A++G  +      L +   I    N       L L VLG+ PI      +  S    F  I+  T +  L++FG+K N P  F  SS+L    G+ EE  FR +    L   LG AG       L+ +SL+FG AH  + G+   N+     +   G  FG+LYILSG N +VP   H +YD  T ++ H  +T  ++V
Sbjct:  135 NLFLAWSLLRNQALLGVTSLFTIQTLQYEDTITALGNAGVGILPLILIVLGSFPILFLGNKISTSESKAFIDINFSTNILALKLFGSKENIPFAFGVSSVLGAITGLCEELSFRALGLPILAKRLGEAGDPNVLLGLLASSLVFGLAHWSIGGSWKDNSVVVPLQILTGLWFGVLYILSGYNFLVPAGVHAIYDAYTLIDAHLASTSQLKV 345
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A835ZC13_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC13_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.340e-15
Identity = 57/196 (29.08%), Postives = 100/196 (51.02%), Query Frame = 2 
Query:  419 ILITGEAIVGAAAAVLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAFTEACYGANFGLLYILSGGNLVVPTVAHVVYDL--LTFLEVHYRATGSIEVNMKGP 1000
            +L++   +V  A A+ A    +++   +  +   +G GVLGALP+      LE +   + ++I + T+ +++ + G          ++  + ++AGV EE +FRG++Q  LQ  L    ++  ++++FG  H+  P   A      GA F LL++ SG NLVVP VAH VYD+  +  L +  R   S +     P
Sbjct:    1 VLVSQWLLVPIALAI-AKALSLDILSTVSITGMDIGYGVLGALPVAGVMALLEITQWGWVQRISERTRTFLITLLGKDGGGIFGLFFALGVGIAAGVGEELMFRGLLQGGLQRYLSTEAAVAASAVVFGLLHAVTP-MYAVCAGITGAYFSLLWLWSG-NLVVPIVAHAVYDIGAMLLLSLQLRGESSAQGTSAAP 193
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A6U6BA36_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BA36_GUITH)

HSP 1 Score: 87.4 bits (215), Expect = 9.560e-15
Identity = 84/316 (26.58%), Postives = 131/316 (41.46%), Query Frame = 2 
Query:  401 NLQLMRILITGEAIVGAAAA----VLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLG-AGP-----SLVVASLLFGFAHSPVPGA---NAFT---EACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEVNMK----------GPVEQDTLGGRVGRVSKEFGLSPKFVNMAFSVFKQLDLDGNGSIDQQELKLGLRTFGKFTSDEEIRVIMCQADVDGNNVLSFDE---FVRLL 1261
            NL L   L+  +A++G  +      L +   I    N       L L VLG+ PI      +  S    F  I+  T +  L++FG+K N P  F  SS+L    G+ EE  FR +    L   LG AG       L+ +SL+FG AH  + G+   N+     +   G  FG+LYILSG N +VP   H +YD  T ++ H  +T  ++              GP +  +   R+ + S+              +F   D   +G +   E++  ++  G    +  +  +  QAD         +E   FV LL
Sbjct:  135 NLFLAWSLLRNQALLGVTSLFTIQTLQYEDTITALGNAGVGILPLILIVLGSFPILFLGNKISTSESKAFIDINFSTNILALKLFGSKENIPFAFGVSSVLGAITGLCEELSFRALGLPILAKRLGEAGDPNVLLGLLASSLVFGLAHWSIGGSWKDNSVVVPLQILTGLWFGVLYILSGYNFLVPAGVHAIYDAYTLIDAHLASTSQLKYAQARSSSAKFLPIGPADASSTRERIQQNSR-------------LIFYLADTSRDGILQLPEIRAAIQQLGYRPDETLLLSLFQQADXXXXXXXXXNEWNSFVELL 437
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: A0A0K0XXG1_9GAMM (Uncharacterized protein n=1 Tax=Wenzhouxiangella marina TaxID=1579979 RepID=A0A0K0XXG1_9GAMM)

HSP 1 Score: 81.6 bits (200), Expect = 3.580e-14
Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 2 
Query:  530 GVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPS-VFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAFTEACYGANFGLLYILSGGNLVVPTVAHVVYD 934
            G+LG +P+ A  V LE S   +   +    + +++ +F      PS VFL    LALSAGV EE LFRGVIQ  L GP G  P+L++ASLLFG AH+        T    G   GLL I +G +L+VP + H +YD
Sbjct:   59 GMLGTVPMLALLVGLECSNAAWVEALRGFVRRHLIPLFQGVG--PSGVFL----LALSAGVCEELLFRGVIQTGLAGPFGPWPALLLASLLFGLAHAMTRAYFVLTTVM-GLYLGLLQIWTG-SLLVPMLVHFLYD 186
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BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Match: L1IJ81_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IJ81_GUITC)

HSP 1 Score: 82.0 bits (201), Expect = 5.000e-14
Identity = 50/160 (31.25%), Postives = 86/160 (53.75%), Query Frame = 2 
Query:  458 AVLAFFAQINLFDNLDFSTTMLGLGVLGALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSILALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAFTEACYGANF-GLLYILSGGNLVVPTVAHVVYD 934
            ++ A+   ++L    D S + +GLG   +LP+ A S  L+   ++  ++I   T+ +  ++F  + ++  +     +  + AG  EE LFRGV+Q+ L    G  P++ + S+ FG AH   P    F  +  G+ F G++ I S GNL+VP +AH VYD
Sbjct:   67 SIFAWLLSLDLSKGFDTSLSSIGLGFAWSLPLLAMSSLLQTLDLEPIKEIQALTEAFARKLFSGRPDYQLI-----LFCICAGFGEELLFRGVLQQKLAESAGLIPAISLTSVAFGAAHFLTP--TYFLLSFIGSIFFGVVLIQSNGNLLVPIIAHAVYD 219
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig956.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE3_ECTSI5.010e-12664.05Abortive infection protein n=2 Tax=Ectocarpus TaxI... [more]
A0A836CHD9_9STRA2.240e-8047.70CAAX protease self-immunity-domain-containing prot... [more]
A0A0G4EAR4_VITBC7.030e-5540.77Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S0HFR6_9CRYP2.640e-1728.29Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
UPI00036209A23.020e-1636.99CPBP family intramembrane metalloprotease n=1 Tax=... [more]
A0A7S4NY07_GUITH1.590e-1532.23Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A835ZC13_9STRA4.340e-1529.08CAAX protease self-immunity-domain-containing prot... [more]
A0A6U6BA36_GUITH9.560e-1526.58Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A0K0XXG1_9GAMM3.580e-1442.65Uncharacterized protein n=1 Tax=Wenzhouxiangella m... [more]
L1IJ81_GUITC5.000e-1431.25Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig956contigD-mesarthrocarpus_Contig956:19156..25680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LFE3
PFAMsAbi
Model size1539
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue2.38e-128
EggNOG OGs2E087@1|root,2S7PH@2759|Eukaryota
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-07_005960.1
DescriptionCAAX protease self-immunity
Cds size1227
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig956.4.1prot_D-mesarthrocarpus_Contig956.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig956 19247..25459 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791110.8229043-UTR-D-mesarthrocarpus_Contig956:19155..192461680791110.8229043-UTR-D-mesarthrocarpus_Contig956:19155..19246Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig956 19156..19246 +
1680791110.9821687-UTR-D-mesarthrocarpus_Contig956:25459..256801680791110.9821687-UTR-D-mesarthrocarpus_Contig956:25459..25680Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig956 25460..25680 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791110.8407598-CDS-D-mesarthrocarpus_Contig956:19246..193671680791110.8407598-CDS-D-mesarthrocarpus_Contig956:19246..19367Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 19247..19367 +
1680791110.8532717-CDS-D-mesarthrocarpus_Contig956:19614..198831680791110.8532717-CDS-D-mesarthrocarpus_Contig956:19614..19883Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 19615..19883 +
1680791110.8663342-CDS-D-mesarthrocarpus_Contig956:20289..203671680791110.8663342-CDS-D-mesarthrocarpus_Contig956:20289..20367Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 20290..20367 +
1680791110.8885586-CDS-D-mesarthrocarpus_Contig956:20978..210831680791110.8885586-CDS-D-mesarthrocarpus_Contig956:20978..21083Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 20979..21083 +
1680791110.9043636-CDS-D-mesarthrocarpus_Contig956:22055..222741680791110.9043636-CDS-D-mesarthrocarpus_Contig956:22055..22274Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 22056..22274 +
1680791110.9200318-CDS-D-mesarthrocarpus_Contig956:23222..233541680791110.9200318-CDS-D-mesarthrocarpus_Contig956:23222..23354Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 23223..23354 +
1680791110.934517-CDS-D-mesarthrocarpus_Contig956:23694..238131680791110.934517-CDS-D-mesarthrocarpus_Contig956:23694..23813Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 23695..23813 +
1680791110.953251-CDS-D-mesarthrocarpus_Contig956:24463..245361680791110.953251-CDS-D-mesarthrocarpus_Contig956:24463..24536Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 24464..24536 +
1680791110.969015-CDS-D-mesarthrocarpus_Contig956:25348..254591680791110.969015-CDS-D-mesarthrocarpus_Contig956:25348..25459Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig956 25349..25459 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig956.4.1

>prot_D-mesarthrocarpus_Contig956.4.1 ID=prot_D-mesarthrocarpus_Contig956.4.1|Name=mRNA_D-mesarthrocarpus_Contig956.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=409bp
MVGIPLLAVSHSSAAFVQQPFILKPPVLPHLVFCGGNLSPVRPRHPHTWD
HLSRGLSIGHIDHTGTPRQVIPVLSAQGLGGGDKHLTPRENQQMLGNGVL
GGVNLQLMRILITGEAIVGAAAAVLAFFAQINLFDNLDFSTTMLGLGVLG
ALPIFAASVWLERSGVDFFRKIDQDTKLYVLQIFGAKRNFPSVFLWSSIL
ALSAGVFEEALFRGVIQKFLQGPLGAGPSLVVASLLFGFAHSPVPGANAF
TEACYGANFGLLYILSGGNLVVPTVAHVVYDLLTFLEVHYRATGSIEVNM
KGPVEQDTLGGRVGRVSKEFGLSPKFVNMAFSVFKQLDLDGNGSIDQQEL
KLGLRTFGKFTSDEEIRVIMCQADVDGNNVLSFDEFVRLLAINYSYLLKP
STSTTTEK*
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mRNA from alignment at D-mesarthrocarpus_Contig956:19156..25680+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig956.4.1 ID=mRNA_D-mesarthrocarpus_Contig956.4.1|Name=mRNA_D-mesarthrocarpus_Contig956.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6525bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig956:19156..25680+ (Discosporangium mesarthrocarpum MT17_79)
AATTTTCTGCAGGGGGGGCCACAAGGAGAGTGACTTCAAGTAAGGAAGTG
AGAGCTTACCTGTCTTACCACCAACAGTGCCACTGGAAACCATGGTCGGG
ATTCCCTTGCTCGCTGTGTCGCATTCATCTGCAGCGTTTGTCCAGCAGCC
TTTCATACTCAAACCTCCAGTTTTACCACACCTCGTTTTCTGCGGAGGGA
ACCTCTCTCCAGGTGACTTTCTGCACGGATGAAGTAGTCTGTTGGATTCT
GTGATGGTTTCTCTGTCAGCAGAAGTATGTCCAGATTTTGGGTGTGGTAA
AATAGGGGTATATTTCCATCAAGCCGGTTATAGAGTTAACACTATGAGAT
CGACGACAAAGATTCCAATGATTTTTTCCGTACCTCAACCACCGCTTCCT
CAACTCTACACATGGTGATCCCCAATCATAAACGATTCGATGTGCTCCTT
GTGCATCAGTTCGTCCTCGTCATCCACATACATGGGATCATCTCTCACGT
GGGCTGAGCATTGGCCACATTGACCACACGGGCACCCCTAGGCAAGTGAT
CCCCGTTCTGTCTGCTCAGGGTCTGGGTGGAGGAGACAAGCACCTCACGC
CTCGAGAGAATCAGCAGATGCTAGGGAATGGTGTCCTTGGGGGCGTTAAT
TTGCAGCTGATGAGGATCCTCATCACAGGAGAGGCCATTGTTGGAGCTGC
AGCCGCAGTGCTGGCCTTCTTTGCGCAGGTATCGTTGGTCAATGGTTGCA
AAGCTGGAGATGAAGTTCGATTTGATGCGAAGAAATAGGACTGTTGCACA
TCGAGTAGCGCTTCGAGAGTGTGGATGAGCCTCGATGTTATTTGAGCGTG
TGGCGTTGGTGCTCGCCTAACTTCTAGCTCTTATCCTATGGAGATCACGA
TATTCTTGTTGGTTCACAATCGAACGTTATGTTTATGAAGGCACTACTAC
GTGTGGTGCTTCCATCCAGAGCAATGGTTACAATGCAAACCTTTTTTCTG
CCTCTATCACAGAGGCTGTACAATCAGAAGGAACGTTATGATTTGCTGAC
TTGCAGCTTGCCTCTGTTTACCTGTGCTTCCCGTCCCTCCCTTTATTTGT
CCCTCGCTTGTCCCTTCATGGGGTACGGGAGTAGATCAACCTTTTCGACA
ACTTGGACTTCTCCACTACAATGCTGGGACTTGGTGTGCTGGGTGCCTTA
CCTATTTTCGCCGTGAGTCCTTCCCTTCACTTCCTTGCAGTGATCCTTTC
AACCTGTCACATCCTGTCAACAGGGTCACTTTGGGTTGGGGCCTGTCTTG
GAATCTGCCATAGTGCAAGGCTATCGACACGCTTGGTTTGCAAAGGTTCA
CCAGGTAGTGTAGTCAAGTAACTGAAGTGAAATTCTGTTTATTGCTCTAT
CACATCAGGGTTCAATTTCAAGCAAGCTTGTGCTTGGTGCATACTTGATG
TATACGCTTTGAAGGATGCAGAAGCCTTGTGGACGGTTTGTGGTGTTCCA
TGTTGTCATTTTTCATTTCATTCTTTGGCCTTGGTGTGCATGTGCACGGG
CCATGTTTTTATTTTCAACACCAAGGGGTTGTGAGGCAACGACATTTGTC
CTTTTTCGGGGCCGAGATGCTGAAAAATCCTGAGATTAACTGTACAGTAC
ATGGGAGAACAGGAAACAACAGCTACAAGAGTATTATGCACCTTTGTCTT
CATGCATGTTTCCACTCTTCTATCCACCTGAGCCGACCCAACTGCATGCA
CACACACCATTTTTCTTTTGCCTTTGTTTAGTGTTTGGATCCTTGATTAA
TTGATGCTTGTCTAATTGGTCAGGCCAGTGTATGGCTTGAGCGCAGTGGT
GTGGACTTCTTTCGAAAGATTGATCAGGACACAAAGCTCTACGTGCTTCA
AATATTCGGGGCTAAGAGAAACTTCCCGGTGAGGCATATGATCACTTCTT
GCACTTGGTCGTTTCTTTTATGTATAGGTACTTCAACATTTATATATATA
ACAAGCAGTGGTTGCTTTGTGCTTTTTTATCCAGATCGGTGAAGGTTGAA
AGTTGAAGGTTAAAGGTTCTGATATTGGTCCTACAGGTTCTTAATGGGTA
ACTTAGTCATTAGGGTTAGGGCTAGGGCTAGTTGCCTTATCTCATAGGTA
TACATAAGTTAGGCTTAGGGCTAGGGTTAGGGGTAGGGGTAGGGTTTCCT
TATCTCATAGGTATACATAATATGCTTCTTATGACAGGAAATGGTGTAAA
AACAGTCTAATCCTAAAACTCTATGCATTCATTGTTTTGTGAAGGGCTAC
TTGTGAAGTGGTTCAGAGGTTAGGGTCAATGAAGAATCCATGAAAATCAA
TGCAATTGCATACATGTTTAGGACATTGGGCTCTGGACATGGATATGGAG
CAGGTGCAACATTGGACATTCAAATATTCAAACATTCAATATTTCATAAA
ATTCAACGTTCAATTGAAGGAACAGGACAAGCTCAATTCTTATCTAGCAC
TTCTCTTAGCATTGTGGTCATAGTTCAGCAGATTGGGCTGGATTTCCTTC
ATGTTTGTTCCAGTACTTCAGTGATACTGCCTGCATATGCTTCAATAACC
AATGGCCTAGCCCTACAATGGAAGTGAAATGTTTAATGGTGGGCTTAAGG
GGACAATAAATCAAATGCCCTGTACCAAGTCCCTTGTGTGAAGTTCTCTT
TTTGCATTCTTCCTCAGTTCTTCAAATTTGTCAGGTTGTATCATTGTGCC
AGGTTCTAGTTTTGAGGATACCTGGGAGTGTTGTTTTGCACCTCTTGTCG
GCCACTAATGTGCAGGACAGCTCTAACCCTTACCCTCAACTTGGTCTTGA
CCTGGTGCCTGCCGCTGAATAACAATATAAAAAATCACCCTTAAATTAAG
TCTGTCTTCCTGTGGTCGAGCATCTTGGCACTTAGCGCAGGGGTGTTTGA
AGAAGCGCTCTTCCGTGGTGTTATCCAGAAGTTCCTGCAAGGGCCCCTTG
GTGCAGGTCCTTCCCTGGTGGTTGCATCGCTCCTATTTGGCTTTGCACAC
TCCCCAGTCCCAGGAGCGAATGCCTTCACGGAGGCATGCTATGGGGCTAA
CTTTGGCTTGCTCTATATTGTGAGTAAGTGTTAGGGTTGGGATTTGCCTC
AGATACCTAGTATACAATAATGTGCCATGGGGGGTCATCGTGAGTCTATC
CTTGCATAATTGCTTACTGCCTTTCTGACCTTCCTGACCTATTTGCATGT
GTTTTCACATTTTCTCTATCCCTTTACCCTCCTGTTGTGCCCTCAATAAT
GTTCTACATCCAACAGAGCTTAGGGTTAGGGTTACATGTACACAAGGTAA
TTAGATCAATACGTTGGGTTCTCGTGTTGTTTCCCTCCTTGTTTTGCTCT
TGTTTTGAAAGTATCAGGTATAGGGTGTGTAGGATTGTGCTTAGTATACC
ATAATATAGCTCTAAGCTATTTGACTGTAGCGCTGGGGTTAGAGTTAGGG
TTCGGAAGTACATGGTTGCATACATTATGTGACATTTTGTAGCACCTGGG
GTACACCTAGAGTGTGAACGTAATTCAAGTATGTGAAGGACACTGAAGAT
TTTTCTTGTTGCTTATTTATTGCATTGGAGTACCATGCCAGTGTCATAAT
GTTGGAGCTCTTGAGTATTATTATGCCTCGAATATTGATTTGGCATATTA
ATGAAACAAATGTGCTGTATGTTGGTCAAATATGACTACTATATTAACCC
TAAATTGCTTTCCCTAACCAAAGTAACTTTATTCATTTATTTTTTTTTGT
TTCATCTTTCTAGGATCCTGGTGAGGTGTAGCTGAAGGAACATCAGCCTC
TTCAGCGTGCTTAGAGCTCTAGGTCATCAGCCCCACAAGAAAAGAAAGAT
GAAGGCTGATGCTTCCAGTAGTGGTACTTTGTTCTTTGTAGTTAGGGTTA
GGGCTGTACAGAATTATTCCCGAAATATTTGTCTCCAATTCAAGTCACTC
AGGTTGTCCATCCTTGCCTGCCCATGACCTTATCCTTGCCCTAACCCTAA
CCCTAACCCTTGAACAGCTTTCGGGGGGGAATCTGGTGGTGCCCACAGTA
GCCCATGTGGTGTATGATCTACTCACCTTCCTTGAGGTTCACTACAGGGC
TACAGGTTCCATTGAGGTCAACATGAAGGGACCTGTTGAGCAAGACACGG
TGAGTGAGAGTGACTTGGCCTGACATTTGACACATACCTGATCCCTTACC
CTAACCGTAGAGCTATAGAGCTCTTATCAGCTGCTTGACGTAGTTTGAAG
CAGAATGAAGAATCCAGAATTGGGCATCATCGTTGGGCCATCTGCTATTG
GGTCTGGCACTTGTTGTATGTTCTAACTTTTCAAATTGAACAAGAAAAGG
TTGAGATTAATCTGCACAAGTACATTAAAACACTGTGCTGATACGATGGG
CTGATTATGCTGATAATAACCCTAACCCTAACCCTAAATGAATTCACATG
CACCACCTTCTCCGCTTGACTGCACCACTACTACCACAGCTTGGTGGTCG
TGTGGGTCGTGTGAGCAAGGAGTTTGGCCTCTCGCCGAAGTTTGTCAACA
TGGCATTCTCAGTTTTCAAACAGCTGGACCTTGATGGGAATGGCAGCATT
GATCAGCAGTGAGTCTCACACTGTTGCATGTCATGTTAGGGTTAGGGTTA
GGGTCAGGGTTATGATTTCCTTATTTTCCCTGCTTCATTGCCATTTAGGT
GATGCCCTATTCAAGTCAGCATAACAGGCCACACCTTTTATGATACAGAA
GTACTCTCAGTAGCAAAACTTCTATACTATAAGTAAGTTTTCCTATAGTA
CTTTTAATCATTCAATTGAGTTCATAACTTTATACTAAGCTGGTTAACTT
ACAAACCCCTCTTCAAAATTTATTGCACTCAAATTGCCAGGTTTGTGACA
TGTGCATCTGGGGCCTTAAAGCCGCTATACCTATTTGCTTGAGCTTTGGC
TCGCGCTGAATCGCCTTAAATTGCTCGTAATGGTTTGTTTATGATGTTTA
TATAACGGATTTAGTATTTTTATGATTCACTTTGAACTATACAAGTTCCT
GAGTGTGATGACAACTTTAAGTTAATGTAGAGGGATTAGAAAGTTTGTTC
ACTCTATAGCTCTATTAGTTTTTAATGTAGTCTATAGTCTTCAATACAGC
ATACTTATGTTTGAAGTATGACCAGTAGCGTATAAATGTTGTGCACTGCC
TATCGCCCATCATTTGAAACAATCAACTGTGTTGTTGGGTGCATGGTTAT
TCCGGAAGAGAGCTCAAGCTTGGCCTGCGGACATTTGGCAAGTTCACTTC
TGATGAAGAGATCCGAGTCATAATGTGTCAGGTGAATCAACCCTCCTAGG
TCAAAGGCCAAAGGCCACATGTCAACGGAGCTTGCGCAACACAAGTAATG
CACAGGGATGTTCGGATGTGTCATAGGTGGTATGTGGGAAGGTTTCCTGT
AAATCTTGATAATTTGTCTTGATCGTTCTTGGTGTGGGCATTGTGTGAGA
TATTGTAGGGGAAGTGTGCCTGTCATCTCAATATTGAACCACGCATTGAT
GCCTGCACATGCCAGGTGTAATACTGAGATGATACCAGGCTTTGTTGTGC
TGCATATTATGTCACCTGTAATGCTACCTATTATGTTATCTATCATGTGG
ATTGCTGGGTTTGAGTCGGGACAAGTAGTGCTGCGCATTTGAAAGAAGCT
TGAGGCTTCCTTGTAGGCATGAGCACACCTTGGAAAACAGCCACTTGTAT
GAATATGAATACACTTGTCCTTTGAAACTGGTGAGTCTTGAGTTTTGCCG
CATCTCCCTCCTGGGATTACCTAAGTCAACATTGCGTCTTTTTTACTTTG
AGTGCTCAACTCTTTGGTAGCAGGATGTAGATTGTTCCTTGAGGGAAAAA
TATGTGGATGGGTAGGAGCTTCACAGTGCTTGCTTTGAAGTGCAGTTTTT
GTTTTTTCTTCAGTGATGAAGGGTTATATTTAGGGTTTAGGTTAGTTGGC
CTGAATCCGGTTTAGTTTATTGGACGCAGTTGATTCTCATCGTTTTTATT
TGCCTAACCAATACAAATGAATACAAGCCAATTTGAGCACGCAATACAGC
ATGGCTGATTTTTGATACCTTAACCAAACCCTTGATTGCACAGGCGGATG
TCGATGGCAACAACGTGCTCTCCTTTGACGAGTTTGTCCGATTGCTGGCA
ATCAACTACAGTTATTTGCTTAAGCCTTCAACTTCCACAACGACTGAGAA
GTGAAGATGTAAGGCCTGTGCTGCTGGTCTGATGTCGTAAGTAATGTGCT
TGAAGCCGTTGTTCCCTTTTACTTAATGTTTCCTAATTTTTCTTGTGTGT
TCCCCAAAGCAGCCCAGCATGGATTTGCATTCGATTGGTGTTACTTCCTC
TGTTTCAAATTAAATGTTGTGATTCATGGAGCGGAGCCGTTCTCGCCTCA
TAATGCCTCGTGCGCAAAGAAATTT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig956:19156..25680+

>mRNA_D-mesarthrocarpus_Contig956.4.1 ID=mRNA_D-mesarthrocarpus_Contig956.4.1|Name=mRNA_D-mesarthrocarpus_Contig956.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1227bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig956:19156..25680+ (Discosporangium mesarthrocarpum MT17_79)
ATGGTCGGGATTCCCTTGCTCGCTGTGTCGCATTCATCTGCAGCGTTTGT
CCAGCAGCCTTTCATACTCAAACCTCCAGTTTTACCACACCTCGTTTTCT
GCGGAGGGAACCTCTCTCCAGTTCGTCCTCGTCATCCACATACATGGGAT
CATCTCTCACGTGGGCTGAGCATTGGCCACATTGACCACACGGGCACCCC
TAGGCAAGTGATCCCCGTTCTGTCTGCTCAGGGTCTGGGTGGAGGAGACA
AGCACCTCACGCCTCGAGAGAATCAGCAGATGCTAGGGAATGGTGTCCTT
GGGGGCGTTAATTTGCAGCTGATGAGGATCCTCATCACAGGAGAGGCCAT
TGTTGGAGCTGCAGCCGCAGTGCTGGCCTTCTTTGCGCAGATCAACCTTT
TCGACAACTTGGACTTCTCCACTACAATGCTGGGACTTGGTGTGCTGGGT
GCCTTACCTATTTTCGCCGCCAGTGTATGGCTTGAGCGCAGTGGTGTGGA
CTTCTTTCGAAAGATTGATCAGGACACAAAGCTCTACGTGCTTCAAATAT
TCGGGGCTAAGAGAAACTTCCCGTCTGTCTTCCTGTGGTCGAGCATCTTG
GCACTTAGCGCAGGGGTGTTTGAAGAAGCGCTCTTCCGTGGTGTTATCCA
GAAGTTCCTGCAAGGGCCCCTTGGTGCAGGTCCTTCCCTGGTGGTTGCAT
CGCTCCTATTTGGCTTTGCACACTCCCCAGTCCCAGGAGCGAATGCCTTC
ACGGAGGCATGCTATGGGGCTAACTTTGGCTTGCTCTATATTCTTTCGGG
GGGGAATCTGGTGGTGCCCACAGTAGCCCATGTGGTGTATGATCTACTCA
CCTTCCTTGAGGTTCACTACAGGGCTACAGGTTCCATTGAGGTCAACATG
AAGGGACCTGTTGAGCAAGACACGCTTGGTGGTCGTGTGGGTCGTGTGAG
CAAGGAGTTTGGCCTCTCGCCGAAGTTTGTCAACATGGCATTCTCAGTTT
TCAAACAGCTGGACCTTGATGGGAATGGCAGCATTGATCAGCAAGAGCTC
AAGCTTGGCCTGCGGACATTTGGCAAGTTCACTTCTGATGAAGAGATCCG
AGTCATAATGTGTCAGGCGGATGTCGATGGCAACAACGTGCTCTCCTTTG
ACGAGTTTGTCCGATTGCTGGCAATCAACTACAGTTATTTGCTTAAGCCT
TCAACTTCCACAACGACTGAGAAGTGA
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