mRNA_D-mesarthrocarpus_Contig9512.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2E5PFD8_9PROT (EamA domain-containing protein (Fragment) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PFD8_9PROT) HSP 1 Score: 188 bits (477), Expect = 8.070e-59 Identity = 84/104 (80.77%), Postives = 97/104 (93.27%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKA 312
N+ MLPLA +P L WVTP++EQWPL+IG+G++SSIGGYCFTR+VS+ADARIVQPFQFSRMIFAT IGWIMFSELPD+WTWVGA VIFGASYYIVYREGLAR++
Sbjct: 80 NLMMLPLALVPALIFWVTPSIEQWPLVIGIGIVSSIGGYCFTRSVSAADARIVQPFQFSRMIFATAIGWIMFSELPDIWTWVGAGVIFGASYYIVYREGLARRS 183
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2S6Q8V5_9PROT (Riboflavin transporter n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q8V5_9PROT) HSP 1 Score: 187 bits (474), Expect = 5.420e-57 Identity = 86/104 (82.69%), Postives = 96/104 (92.31%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKA 312
N+ MLPLA IP L WVTPT+EQWPL+IG+GV+SS+GGYCFTR+VS+ADAR+VQPFQFSRMIFAT IGWIMFSELPD+WTWVGA VIF ASYYIVYREGLARKA
Sbjct: 184 NLLMLPLALIPALVFWVTPTLEQWPLVIGIGVVSSVGGYCFTRSVSAADARVVQPFQFSRMIFATAIGWIMFSELPDIWTWVGAGVIFCASYYIVYREGLARKA 287
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2D8G2R3_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D8G2R3_9PROT) HSP 1 Score: 185 bits (469), Expect = 3.260e-56 Identity = 83/104 (79.81%), Postives = 94/104 (90.38%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKA 312
N GMLPLA IP LF+WVTPT+ QWPL+IG G++SSIGGYCFTR+VS+ADARIVQPFQFSRMIFA IGW MFSELPDLWTW+GAAVIF ASYY+V+REGL R+A
Sbjct: 184 NFGMLPLALIPTLFLWVTPTITQWPLVIGXGIVSSIGGYCFTRSVSAADARIVQPFQFSRMIFAAAIGWXMFSELPDLWTWIGAAVIFAASYYLVFREGLTRRA 287
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2E6P415_9GAMM (Uncharacterized protein n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2E6P415_9GAMM) HSP 1 Score: 176 bits (446), Expect = 7.950e-53 Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKAAAT 321
N+ MLP A +P LF WVTPT+ QWPL+IG+ ++SSIGGYCFTR+VS+A+ARIVQPFQFSRMIFAT IGWIMFSELPD+WTW+GA VIF ASYYIVYREG ++ T
Sbjct: 184 NMIMLPFALLPALFFWVTPTLSQWPLVIGIAIVSSIGGYCFTRSVSAAEARIVQPFQFSRMIFATAIGWIMFSELPDIWTWIGAGVIFAASYYIVYREGFGKRKQQT 290
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2E7QZ97_9PROT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E7QZ97_9PROT) HSP 1 Score: 145 bits (367), Expect = 7.510e-41 Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKA 312
N+ MLPLA +P LFVWVTPT+ + P +IG + S++GG CFT AV +ADAR+VQPFQF+RMIFA IG+ MF ELPD WTWVGAAVIFGASYYIV RE R +
Sbjct: 185 NLLMLPLALVPTLFVWVTPTLTEVPWVIGAALFSAVGGLCFTLAVGAADARVVQPFQFTRMIFAAVIGYWMFFELPDFWTWVGAAVIFGASYYIVLREAKERSS 288
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2E5V3M3_9PROT (Uncharacterized protein n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E5V3M3_9PROT) HSP 1 Score: 142 bits (357), Expect = 2.310e-39 Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREG 297
N+ MLPLA IP FVWVTPT EQ P ++G S+IGG CFT +V +ADAR+VQPFQF+RMIFA IG++MF ELPD WTW+GAA+IF +SYYIV REG
Sbjct: 184 NLLMLPLALIPTFFVWVTPTTEQLPWVLGAAFFSAIGGLCFTLSVGAADARVVQPFQFTRMIFAALIGYLMFLELPDTWTWIGAAIIFISSYYIVLREG 282
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A6N7FIE1_9PROT (EamA family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FIE1_9PROT) HSP 1 Score: 114 bits (285), Expect = 1.380e-28 Identity = 43/77 (55.84%), Postives = 65/77 (84.42%), Query Frame = 1
Query: 46 WVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASY 276
WVTP++E WP I+ +G+ +++G C TRA+ A+AR+VQPF F R++++ G+GW++FSELP++WTWVGAA+IFG+SY
Sbjct: 205 WVTPSLEHWPWILAIGISNTLGALCHTRALGQAEARVVQPFSFLRLVWSVGVGWMLFSELPEVWTWVGAAIIFGSSY 281
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2E6QP41_9PROT (RNA polymerase subunit sigma-54 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QP41_9PROT) HSP 1 Score: 110 bits (274), Expect = 6.380e-27 Identity = 52/102 (50.98%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 16 PLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKAAAT 321
P++ IP LFVW TP+ EQ +I +G+I+++ CF RA + ADA V PF F R+ FA +G+I F E+PDLWTW+GAAVI G+S YI RE + R+ AA+
Sbjct: 199 PVSLIPALFVWETPSWEQLFWLILLGIIATLAHQCFARAFAGADATAVLPFDFIRLPFAAALGYIAFGEIPDLWTWIGAAVIVGSSVYIARRESVMRRRAAS 300
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: A0A2E7QZ94_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QZ94_9PROT) HSP 1 Score: 109 bits (273), Expect = 7.040e-27 Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLAR 306
N+ M+ +A IP+LF W P + +I +GV ++ G + RA+++ADARIV PF F RM F G+G++MF +LP LWTWVGA VIFGA+YY++ E R
Sbjct: 194 NLVMVVIALIPLLFSWRLPPTQTIGWVIALGVFTTAGQWALARAIATADARIVWPFDFLRMPFTVGVGYVMFGQLPGLWTWVGAVVIFGAAYYVIREEAAVR 295
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Match: UPI00146C6D0C (DMT family transporter n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146C6D0C) HSP 1 Score: 108 bits (271), Expect = 1.420e-26 Identity = 53/109 (48.62%), Postives = 76/109 (69.72%), Query Frame = 1
Query: 1 NIGMLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVQPFQFSRMIFATGIGWIMFSELPDLWTWVGAAVIFGASYYIVYREGLARKAAATNR 327
I ++P++ +P LFVW TPT+EQ ++G+GV +++G FTRA S ADA V PF F R++FA IG++ FS+ PD++ W+GAAVIF ++ YI YRE AR A+ R
Sbjct: 173 QILIIPMSLVPALFVWQTPTLEQMYYVVGMGVCATLGHLMFTRAFSLADATYVMPFDFFRLVFAAVIGFMFFSQQPDMFVWIGAAVIFVSAVYIAYRE--ARTASERRR 279 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9512.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9512.1.1 >prot_D-mesarthrocarpus_Contig9512.1.1 ID=prot_D-mesarthrocarpus_Contig9512.1.1|Name=mRNA_D-mesarthrocarpus_Contig9512.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp MLPLAFIPMLFVWVTPTVEQWPLIIGVGVISSIGGYCFTRAVSSADARIVback to top mRNA from alignment at D-mesarthrocarpus_Contig9512:1..342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9512.1.1 ID=mRNA_D-mesarthrocarpus_Contig9512.1.1|Name=mRNA_D-mesarthrocarpus_Contig9512.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=342bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9512:1..342+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9512:1..342+ >mRNA_D-mesarthrocarpus_Contig9512.1.1 ID=mRNA_D-mesarthrocarpus_Contig9512.1.1|Name=mRNA_D-mesarthrocarpus_Contig9512.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9512:1..342+ (Discosporangium mesarthrocarpum MT17_79)back to top |