mRNA_D-mesarthrocarpus_Contig9509.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: D8LKJ6_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ6_ECTSI) HSP 1 Score: 126 bits (316), Expect = 2.990e-31 Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 379 GRFLYMSTRKMYQGEWVDGFPQCGEYLDMPEDLVNMSVPDGSFPLPPLTLKHSGSVLNYSIGDIRNRRAAVHSQPGKVFNSEEM 630
GR+LYMSTRK+Y+GEWV+G P+CGEY DMP LV+ SVPDGSFPLP LTLK S +VLN ++ IRN RA HSQPG+VF ++EM
Sbjct: 194 GRYLYMSTRKVYEGEWVEGTPKCGEYQDMPAALVDRSVPDGSFPLPELTLKRSSAVLNEAVAVIRNERAKRHSQPGRVFTTDEM 277
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A836CJJ5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJJ5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 7.550e-15 Identity = 119/211 (56.40%), Postives = 132/211 (62.56%), Query Frame = 1
Query: 1 DMKNGYGTKTWVGGNKYEGEWAWDKRHGKGTFWVMEQGKLRKQXXXXXXXXXXXXXXXXYFADGGKYEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDKKEGPAGRFLYMSTRKMYQGEWVDGFPQCGEYLDMPEDLVNMS-VPDGSFPLPPLTLKHSGSVLNYSIGDIRNRRAAVHSQPGKVFNSEEM 630
D K+GYG +TWV GT W E GKLRK XXXXXXXXXXXXXXXX XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KEGP GR++Y ST K+Y+GEWV G P CGEY D P + PD +F LP L L +G+VLN +I I N RAA Q G+ EE+
Sbjct: 59 DRKDGYGVRTWVSXXXXXXXXXXXXXXXXGTLWAAEGGKLRKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGKMDYMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKEGP-GRYMYRSTGKVYEGEWVRGSPWCGEYKDAPAPPGPAAGEPDEAFVLPELKLMRAGAVLNQAIARIHNERAARFHQGGRACTPEEL 268
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: H3HBB9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBB9_PHYRM) HSP 1 Score: 73.6 bits (179), Expect = 2.950e-12 Identity = 45/102 (44.12%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 358 DKKEGPAGRFLYMSTRKMYQGEWVDGFPQCGEYLDMPE-DLVNMSVPDG----SFPLPPLTLKHSGSVLNYSIGDIRN--RRA---AVHSQPGKVFNSEEMV 633
D+KEGP GR+ Y +TRKMY+GEWVDG P+CG Y D E + + DG +F LP L L H VL+ + IR RR+ A PG V E+M+
Sbjct: 40 DRKEGP-GRYFYKATRKMYEGEWVDGAPKCGTYHDDTEYNAQDDDFDDGEGHTAFQLPELELAHPDQVLSEGVAGIRQDPRRSSMTATELDPGAVVFDEQML 140
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A7S2CHE2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHE2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 8.620e-9 Identity = 40/108 (37.04%), Postives = 54/108 (50.00%), Query Frame = 1
Query: 379 GRFLYMSTRKMYQGEWVDGFPQCGEYLDMP----EDL-------------VNMSVPDGSFPLPPLTLKHSGSVLNYSIGDIRNRRAAVHSQPG-KVFNSEEMVSYNNV 648
GR+ Y ST K+Y+GEWVD P+CGE+ + P +D V S G F LP L L SV+ ++ IR +RA PG KVF S+E+ S +
Sbjct: 194 GRYFYRSTSKVYEGEWVDDIPKCGEFKEAPPGSFDDFPVGGQADANPFAGVAASNSAGVFALPDLKLIQPDSVVTEAVATIRQQRAKDLGAPGLKVFESKEIQSLKKI 301
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A2P4YGX5_9STRA (Reverse transcriptase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YGX5_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.390e-7 Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 358 DKKEGPAGRFLYMSTRKMYQGEWVDGFPQCGEYLD-----MPEDLVNMSVPDGSFPLPPLTL 528
DKKEGP GR+ Y +TRKMY+GEWVDG P+CG Y D M +D ++ +F LP +++
Sbjct: 36 DKKEGP-GRYFYKATRKMYEGEWVDGAPKCGTYHDDSEYNMHDDDLDDEERRNAFQLPEVSI 96
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A5A8C4U6_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4U6_CAFRO) HSP 1 Score: 60.5 bits (145), Expect = 3.230e-7 Identity = 33/87 (37.93%), Postives = 45/87 (51.72%), Query Frame = 1
Query: 358 DKKEGPAGRFLYMSTRKMYQGEWVDGFPQCGEYLDMPEDLVNMSVPD--GSFPLPPLTLKHSGSVLNYSIGDIRNRRAAVHSQPGKV 612
D K GP GR Y TRKMY+GEWVDG P+CG + +P + D F LP L L+ SV+ ++ + R A + G+
Sbjct: 193 DVKHGP-GRLFYRRTRKMYEGEWVDGTPKCGVFSAIPAPGGGPAEADEDDDFVLPELALRDPDSVIMAAVDEARAAAARARGEAGEA 278
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A7S3HS71_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS71_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.150e-7 Identity = 102/213 (47.89%), Postives = 130/213 (61.03%), Query Frame = 1
Query: 1 DMKNGYGTKTWVGGNKYEGEWAWDKRHGKGTFWVMEQGKLRKQXXXXXXXXXXXXXXXXYFADGGKYEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDKKEGPAGRFLYMSTRKMYQGEWVDGFPQCGEYLDMPED-------LVNMSVPDGSFPLPPLTLKHSGSVLNYSIGDIRN---RRAAVHSQPGK 609
D K G+G + KYEGEW ++ +G+GT WV + +Q XXXXXXX Y+ DG Y+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + Y ST+K+YQGEW D P+CGE+ + L+ + F LP LTL +++ ++ D+R RR+ + + G+
Sbjct: 51 DQKEGFGVQINPNNTKYEGEWQNNRHNGRGTLWVKKGKNYHRQYVXXXXXXXMEGQGVYYYEDGAIYK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYYYASTKKIYQGEWYDDQPRCGEFRSPTTEEEARFVRLLPKGLFHNEFKLPGLTLADPTGIIDIAVSDVRMQSIRRSHANPEDGE 262
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A812YEZ6_SYMMI (Morn3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YEZ6_SYMMI) HSP 1 Score: 55.8 bits (133), Expect = 6.320e-6 Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 385 FLYMSTRKMYQGEWVDGFPQCGEYLDMP-EDLVNMSVP---DGSFPLPPLTLKHSGSVLNYSIGDIRNRRA 585
F Y +T K+Y+GEWV+ P+CG++ D E+ P F LP L LK++ +VL+ +I + RN RA
Sbjct: 76 FFYAATNKVYEGEWVEDSPRCGQFRDSTSEEQKRFGKPLIKKSGFSLPQLMLKNTRAVLDTTIAETRNERA 146
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Match: A0A0P1B5Q7_PLAHL (N-carbamoylputrescine amidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5Q7_PLAHL) HSP 1 Score: 54.7 bits (130), Expect = 3.650e-5 Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 1
Query: 379 GRFLYMSTRKMYQGEWVDGFPQCGEYLD---MPEDLVNMSVPDGSFPLPPLTLKHSGSVLNYSIGDIR 573
GR+ Y +TRK+Y+GEW++G P+CG Y D ++ N + +F LP L L VLN SI IR
Sbjct: 491 GRYFYKATRKVYEGEWINGAPKCGIYYDDTKCDDETENYN----TFQLPNLELVCPDQVLNNSITSIR 554 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9509.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9509.1.1 >prot_D-mesarthrocarpus_Contig9509.1.1 ID=prot_D-mesarthrocarpus_Contig9509.1.1|Name=mRNA_D-mesarthrocarpus_Contig9509.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=216bp MKNGYGTKTWVGGNKYEGEWAWDKRHGKGTFWVMEQGKLRKQYAGGWTDNback to top mRNA from alignment at D-mesarthrocarpus_Contig9509:432..4866- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9509.1.1 ID=mRNA_D-mesarthrocarpus_Contig9509.1.1|Name=mRNA_D-mesarthrocarpus_Contig9509.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4435bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9509:432..4866- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9509:432..4866- >mRNA_D-mesarthrocarpus_Contig9509.1.1 ID=mRNA_D-mesarthrocarpus_Contig9509.1.1|Name=mRNA_D-mesarthrocarpus_Contig9509.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=648bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9509:432..4866- (Discosporangium mesarthrocarpum MT17_79)back to top |