mRNA_D-mesarthrocarpus_Contig9507.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9507.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9507.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 4.810e-29
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = 1
Query:    4 KLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            KLLDFGLSKAI  + GGSVARTFVGTPSYLAPEVE R  G G  YGTPVDCWSLGAML+VMLVARFPEF
Sbjct:  205 KLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEERKGGKGKPYGTPVDCWSLGAMLYVMLVARFPEF 273          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A835YLX8_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.320e-27
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 1
Query:    4 KLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            KLLDFGLSK +G++  GS ARTFVGTP YLAPEVE+R +G GG+YG  VDCWSLGA+L+VML ARFPEF
Sbjct:  141 KLLDFGLSKMVGED-MGSAARTFVGTPCYLAPEVEMRSRGQGGSYGAAVDCWSLGAVLYVMLAARFPEF 208          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: W7TL39_9STRA (Protein serine threonine kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL39_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.310e-27
Identity = 53/68 (77.94%), Postives = 57/68 (83.82%), Query Frame = 1
Query:    4 KLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPE 207
            KLLDFGLSK IG++  GS ARTFVGTP YLAPEVE R  G GG YGT VDCWSLGA+L+VMLVARFPE
Sbjct:  217 KLLDFGLSKMIGQD-DGSAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPE 283          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A4D9CU84_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU84_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.940e-26
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    4 KLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            KLLDFGLSK IG++  GS ARTFVGTP YLAPEVE R  G GG YGT VDCWSLGA+L+VMLVARFPEF
Sbjct:  217 KLLDFGLSKMIGQD-DGSAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPEF 284          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.790e-24
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1
Query:    4 KLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            KLLDFGLSK     G GS A+TFVGTP Y+APEVE   +G+GGTY  P DCWSLGA+L+VMLVARFPEF
Sbjct:  214 KLLDFGLSK---NAGNGSAAKTFVGTPCYVAPEVEYTSKGLGGTYSFPADCWSLGALLYVMLVARFPEF 279          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A4D9D6B2_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.780e-23
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 1
Query:    1 VKLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            VKLLDFGLSK I    GGSVA TFVGT +YLAPEVEL   G G   G P DCWSLGA+L VMLVA+FPEF
Sbjct:  137 VKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEF 206          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: W7TDL2_9STRA (Serine threonine-protein kinase dclk3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDL2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.820e-23
Identity = 50/70 (71.43%), Postives = 53/70 (75.71%), Query Frame = 1
Query:    1 VKLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            VKLLDFGLSK I    GGSVA TFVGT +YLAPEVEL   G G   G P DCWSLGA+L VMLVA+FPEF
Sbjct:  278 VKLLDFGLSKLIDPREGGSVANTFVGTRAYLAPEVELLAHGQGKAAGFPADCWSLGAVLHVMLVAKFPEF 347          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A7S1UJ38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ38_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.000e-22
Identity = 47/69 (68.12%), Postives = 52/69 (75.36%), Query Frame = 1
Query:    1 VKLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPE 207
            VKLLDFGLSK +    GGS ARTFVGTP Y+APEVE   QG    YGT VD WS GA+L+VML+ARFPE
Sbjct:  180 VKLLDFGLSKTLSPSEGGSAARTFVGTPCYVAPEVEANAQGKKQEYGTKVDLWSAGALLYVMLIARFPE 248          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A7S2XZA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZA1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.310e-22
Identity = 53/79 (67.09%), Postives = 58/79 (73.42%), Query Frame = 1
Query:    4 KLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVE----LRGQGMG------GTYGTPVDCWSLGAMLFVMLVARFPEF 210
            KLLDFGLSK +G E  GS+ +TFVGTP YLAPEVE    LRG   G      G YGT VDCWSLGA+L+VMLVARFPEF
Sbjct:  127 KLLDFGLSKRMGSE-MGSLGKTFVGTPCYLAPEVEARQRLRGAPDGERCADLGRYGTAVDCWSLGAVLYVMLVARFPEF 204          
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Match: A0A482UT88_9ARCH (Protein kinase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UT88_9ARCH)

HSP 1 Score: 83.2 bits (204), Expect = 1.310e-19
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   73 VGTPSYLAPEVELRGQGMGGTYGTPVDCWSLGAMLFVMLVARFPEF 210
            VGTP YLAPEVE   +G+GGTYG P DCWSLGA+L+VMLVARFPEF
Sbjct:   13 VGTPCYLAPEVEYTSKGLGGTYGLPADCWSLGAVLYVMLVARFPEF 58          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9507.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N3_ECTSI4.810e-2984.06Calcium/ calmodulin-dependent protein kinase 1 n=1... [more]
A0A835YLX8_9STRA3.320e-2773.91Kinase-like domain-containing protein (Fragment) n... [more]
W7TL39_9STRA8.310e-2777.94Protein serine threonine kinase n=1 Tax=Nannochlor... [more]
A0A4D9CU84_9STRA2.940e-2678.26Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A7S3HNC2_9STRA4.790e-2471.01Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A4D9D6B2_9STRA5.780e-2371.43Protein kinase domain-containing protein n=1 Tax=N... [more]
W7TDL2_9STRA5.820e-2371.43Serine threonine-protein kinase dclk3 n=1 Tax=Nann... [more]
A0A7S1UJ38_9STRA2.000e-2268.12Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2XZA1_9STRA2.310e-2267.09Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A482UT88_9ARCH1.310e-1978.26Protein kinase domain-containing protein n=1 Tax=a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9507contigD-mesarthrocarpus_Contig9507:4549..4758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8N3
PFAMsFHA,Pkinase
Model size210
Max annot lvl2759|Eukaryota
KEGG koko:K05869
KEGG Pathwayko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.89e-30
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
EC2.7.11.17
Descriptionprotein serine/threonine kinase activity
Cds size210
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791105.4527931-CDS-D-mesarthrocarpus_Contig9507:4548..47581680791105.4527931-CDS-D-mesarthrocarpus_Contig9507:4548..4758Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9507 4549..4758 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9507.1.1prot_D-mesarthrocarpus_Contig9507.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9507 4549..4758 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9507.1.1

>prot_D-mesarthrocarpus_Contig9507.1.1 ID=prot_D-mesarthrocarpus_Contig9507.1.1|Name=mRNA_D-mesarthrocarpus_Contig9507.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=70bp
VKLLDFGLSKAIGKEGGGSVARTFVGTPSYLAPEVELRGQGMGGTYGTPV
DCWSLGAMLFVMLVARFPEF
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mRNA from alignment at D-mesarthrocarpus_Contig9507:4549..4758-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9507.1.1 ID=mRNA_D-mesarthrocarpus_Contig9507.1.1|Name=mRNA_D-mesarthrocarpus_Contig9507.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=210bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9507:4549..4758- (Discosporangium mesarthrocarpum MT17_79)
GTGAAGCTCTTAGACTTTGGTCTGTCCAAGGCCATCGGCAAGGAGGGTGG CGGCTCCGTAGCACGCACGTTCGTGGGCACCCCCTCCTACCTAGCCCCAG AGGTGGAGCTCAGGGGACAGGGCATGGGGGGCACCTATGGCACCCCCGTA GACTGCTGGAGCCTTGGGGCCATGCTGTTTGTGATGCTTGTGGCACGCTT CCCAGAGTTT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9507:4549..4758-

>mRNA_D-mesarthrocarpus_Contig9507.1.1 ID=mRNA_D-mesarthrocarpus_Contig9507.1.1|Name=mRNA_D-mesarthrocarpus_Contig9507.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=210bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9507:4549..4758- (Discosporangium mesarthrocarpum MT17_79)
GTGAAGCTCTTAGACTTTGGTCTGTCCAAGGCCATCGGCAAGGAGGGTGG
CGGCTCCGTAGCACGCACGTTCGTGGGCACCCCCTCCTACCTAGCCCCAG
AGGTGGAGCTCAGGGGACAGGGCATGGGGGGCACCTATGGCACCCCCGTA
GACTGCTGGAGCCTTGGGGCCATGCTGTTTGTGATGCTTGTGGCACGCTT
CCCAGAGTTT
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