mRNA_D-mesarthrocarpus_Contig9504.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9504.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9504.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: D8LR60_ECTSI (Lipase domain protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR60_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 3.470e-41
Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 1
Query:    1 QDWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASATLWVEGE 330
            +DWH+ +TGHSLGGALATL TLD  R YP  ++TMYNFGSPRVGN+    AF +LYDS VGDSFRVVN+LDVVAR+PR       +DY+H+G TVMV E      W++GE
Sbjct:    6 EDWHVYITGHSLGGALATLATLDHRRRYPEAKVTMYNFGSPRVGNK----AFAELYDSFVGDSFRVVNNLDVVARMPRATMGGISLDYQHSGRTVMVAEDPEEPPWIQGE 111          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A6H5KT38_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT38_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.680e-37
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 QDWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASATLWVEGE 330
            +DWH+ +TGHSLGGALATL TLD  R YP  ++TMYNFGSPRVGN+    AF +LYDS VGDSFRVVN+LD+VAR+PR       +DY+H G TVMV E      W++GE
Sbjct:  975 EDWHVYITGHSLGGALATLATLDHCRRYPEAKVTMYNFGSPRVGNK----AFAELYDSFVGDSFRVVNNLDIVARMPRATMGGISLDYQHCGRTVMVAEDPEEPPWIQGE 1080          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A7S0LWE7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWE7_9CRYP)

HSP 1 Score: 117 bits (294), Expect = 1.320e-31
Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 1
Query:   13 ILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASATLWVEGE 330
            +L+TGHSLG ALATL   D+   +PG ++TMYN+GSPRVGNR    AF  L+D+LV D+FR+VND D+VAR+PR    +R+++Y H G TV+V  +    +WVEGE
Sbjct:    2 VLVTGHSLGAALATLCAADIAPLFPGARVTMYNYGSPRVGNR----AFARLFDTLVPDAFRIVNDADLVARVPR----TRLLNYRHVGRTVLVSAQQGKRIWVEGE 99          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A0G4EHV0_VITBC (C2 domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EHV0_VITBC)

HSP 1 Score: 115 bits (289), Expect = 8.600e-28
Identity = 60/119 (50.42%), Postives = 80/119 (67.23%), Query Frame = 1
Query:    4 DWHILMTGHSLGGALATLTTLDLV----------REYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASATLWVEGE 330
            +W +L+TGHSLGGALATL   D+           R  PG ++ +YN+G+PRVGN     AFV+ +++ +GD+FRVVN  DV+ARLPRG  A  ++DYEH G TV+VDE     LW+EGE
Sbjct:  867 EWEVLVTGHSLGGALATLCAYDMATHGPVSRGEARGPPG-KVLLYNYGAPRVGNG----AFVEKFNAKIGDAFRVVNSRDVIARLPRGATAW-ILDYEHVGRTVLVDEAGQTNLWIEGE 979          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A7S1H6Z8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H6Z8_HEMAN)

HSP 1 Score: 105 bits (261), Expect = 2.070e-26
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    7 WHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASA---TLWVEGE 330
            W I +TGHSLGGAL+T+   D+  +YPG ++  YN+GSPRVGN      FV  ++  V ++FRVVND DVVAR+PR    SR  DY H G T +V         +LWVEGE
Sbjct:    2 WTIYVTGHSLGGALSTICAADMAEKYPGCKVVNYNYGSPRVGNAP----FVQGFNQAVPEAFRVVNDADVVARVPR----SRGFDYYHVGRTALVSRSGGGGRGSLWVEGE 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: L1J5S5_GUITC (Lipase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5S5_GUITC)

HSP 1 Score: 110 bits (275), Expect = 6.600e-26
Identity = 56/109 (51.38%), Postives = 77/109 (70.64%), Query Frame = 1
Query:    4 DWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASATLWVEGE 330
            +W I +TGHSLGGAL+TL   D+   +P   + MYNFGSPRVGN +    FV +++ LV ++FRVVND DVVAR+PR    SR+++Y H G T +V   +S+++WVEGE
Sbjct:  754 EWKIFVTGHSLGGALSTLCAADVAALFPQSAVVMYNFGSPRVGNLK----FVQMFNQLVPEAFRVVNDADVVARVPR----SRLMNYHHVGRTALVS--SSSSVWVEGE 852          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A7S0YX09_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YX09_9CRYP)

HSP 1 Score: 103 bits (256), Expect = 2.640e-25
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 1
Query:    1 QDWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVID---YEHAGCTVMVDEKASATLWVEGE 330
            + + + +TGHSLGGALATL  +D+    P V +TMYNFGSP+VG+    EAFV  Y+SLV +SFRVVND DV ARLPR +    V     Y H G TV+   +     WVEGE
Sbjct:   34 EGFEVFLTGHSLGGALATLCAVDVRTRMPHVSVTMYNFGSPKVGD----EAFVLRYNSLVKNSFRVVNDADVFARLPRNKGIGSVPGLPYYYHVGRTVLTSTERPKA-WVEGE 141          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A7S0TMB5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TMB5_HEMAN)

HSP 1 Score: 102 bits (254), Expect = 5.280e-25
Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = 1
Query:    1 QDWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVID---YEHAGCTVMVD-EKASATLWVEGE 330
             D+ + +TGHSLGGALATL  +D+    P V +TMYNFGSP+VG+    E+FV  Y+ +V +SFRVVND DV ARLPR R    V     + H G TV+   EK SA  W+EGE
Sbjct:   38 DDYEVFLTGHSLGGALATLCAVDVRVRMPHVGVTMYNFGSPKVGD----ESFVLRYNEIVPNSFRVVNDADVFARLPRNRGLGSVPGLPYFYHVGRTVLTSTEKPSA--WIEGE 145          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A7S0UFC6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UFC6_HEMAN)

HSP 1 Score: 97.8 bits (242), Expect = 2.390e-24
Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 1
Query:    1 QDWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMV 291
            + W I +TGHSLGGAL+T+   D+  +YPG ++  YN+GSPRVGN      FV  ++  V ++FRVVND DVVAR+PR    SR  DY H G T +V
Sbjct:    4 EGWTIYVTGHSLGGALSTICAADMAEKYPGCKVVNYNYGSPRVGNAP----FVQGFNQAVPEAFRVVNDADVVARVPR----SRGFDYYHVGRTALV 92          
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Match: A0A4D9CRQ9_9STRA (Lipase_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRQ9_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.360e-23
Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 1
Query:    1 QDWHILMTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLYDSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASA 309
            +DW IL+TGHSLGGALA+L   DL   Y G+ ++MYNFG+PR+GN     AF   Y+   GDS+R+VN+ D  AR PR    + + +YEHAG TV++++   A
Sbjct: 1031 EDWEILLTGHSLGGALASLCAHDLSSRYAGLSLSMYNFGTPRIGN----SAFARAYEESNGDSYRLVNENDAFARFPRNLHPT-LFNYEHAGTTVLLNQATFA 1128          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9504.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR60_ECTSI3.470e-4161.82Lipase domain protein, partial n=1 Tax=Ectocarpus ... [more]
A0A6H5KT38_9PHAE1.680e-3760.91C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S0LWE7_9CRYP1.320e-3153.77Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A0G4EHV0_VITBC8.600e-2850.42C2 domain-containing protein n=4 Tax=Vitrella bras... [more]
A0A7S1H6Z8_HEMAN2.070e-2649.55Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
L1J5S5_GUITC6.600e-2651.38Lipase n=1 Tax=Guillardia theta (strain CCMP2712) ... [more]
A0A7S0YX09_9CRYP2.640e-2551.33Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0TMB5_HEMAN5.280e-2551.75Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0UFC6_HEMAN2.390e-2450.52Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A4D9CRQ9_9STRA3.360e-2348.54Lipase_3 domain-containing protein n=1 Tax=Nannoch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9504contigD-mesarthrocarpus_Contig9504:109..735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LR60
PFAMsC2,Lipase_3
Model size330
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.56e-37
EggNOG OGsKOG4569@1|root,KOG4569@2759|Eukaryota
Descriptionphospholipase A1 activity
Cds size312
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791105.312131-CDS-D-mesarthrocarpus_Contig9504:108..2891680791105.312131-CDS-D-mesarthrocarpus_Contig9504:108..289Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9504 109..289 -
1680791105.3247-CDS-D-mesarthrocarpus_Contig9504:586..7171680791105.3247-CDS-D-mesarthrocarpus_Contig9504:586..717Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9504 587..717 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791105.3341713-UTR-D-mesarthrocarpus_Contig9504:717..7351680791105.3341713-UTR-D-mesarthrocarpus_Contig9504:717..735Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9504 718..735 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9504.1.1prot_D-mesarthrocarpus_Contig9504.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9504 109..717 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9504.1.1

>prot_D-mesarthrocarpus_Contig9504.1.1 ID=prot_D-mesarthrocarpus_Contig9504.1.1|Name=mRNA_D-mesarthrocarpus_Contig9504.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=104bp
MTGHSLGGALATLTTLDLVREYPGVQITMYNFGSPRVGNRQAREAFVDLY
DSLVGDSFRVVNDLDVVARLPRGRRASRVIDYEHAGCTVMVDEKASATLW
VEGE
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mRNA from alignment at D-mesarthrocarpus_Contig9504:109..735-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9504.1.1 ID=mRNA_D-mesarthrocarpus_Contig9504.1.1|Name=mRNA_D-mesarthrocarpus_Contig9504.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=627bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9504:109..735- (Discosporangium mesarthrocarpum MT17_79)
CAGGATTGGCACATTCTCATGACGGGACACTCCCTTGGAGGGGCATTGGC CACGCTGACCACCCTGGACCTCGTGAGGGAGTACCCTGGAGTGCAGATCA CCATGTATAACTTCGGGTCTCCCCGGGTTGGCAACAGGCAAGCGAGGGAG TGAGAGAAAGCAGAAGGAAACAACTTTTCAATTGCTGGGGGAGGGGGGGG GGGGGGTGGATGCAGGCCGGCCGTTTCCCCTTAACTTGTCGCGTGCGCTC TGTTGCTGCCTGCCACTTTTTAATTCTTTTTTTTTCCCGTTGAGTTCCTA CGTTGGCACCTTTTTTTTTGTTGTGGCTCCTACCACTGCGCCCCCCCTCT TTTTCCTTCAAACTTACCCCTCCCTCACCACCCCACCCCACCCCACCCCA CCCTACCCCTCTGCACCCTCCCCTGCGCGCACATGTGAGAGAGCAGGGCC TTCGTCGACCTGTACGACTCGTTGGTGGGGGACAGTTTCCGGGTGGTGAA TGACCTGGACGTCGTGGCGCGGCTACCCCGGGGCCGGCGGGCCAGTCGAG TGATTGACTATGAGCATGCGGGGTGCACCGTCATGGTGGACGAGAAGGCC TCTGCAACCCTCTGGGTAGAAGGGGAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9504:109..735-

>mRNA_D-mesarthrocarpus_Contig9504.1.1 ID=mRNA_D-mesarthrocarpus_Contig9504.1.1|Name=mRNA_D-mesarthrocarpus_Contig9504.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=312bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9504:109..735- (Discosporangium mesarthrocarpum MT17_79)
ATGACGGGACACTCCCTTGGAGGGGCATTGGCCACGCTGACCACCCTGGA
CCTCGTGAGGGAGTACCCTGGAGTGCAGATCACCATGTATAACTTCGGGT
CTCCCCGGGTTGGCAACAGGCAAGCGAGGGAGGCCTTCGTCGACCTGTAC
GACTCGTTGGTGGGGGACAGTTTCCGGGTGGTGAATGACCTGGACGTCGT
GGCGCGGCTACCCCGGGGCCGGCGGGCCAGTCGAGTGATTGACTATGAGC
ATGCGGGGTGCACCGTCATGGTGGACGAGAAGGCCTCTGCAACCCTCTGG
GTAGAAGGGGAG
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