mRNA_D-mesarthrocarpus_Contig950.3.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig950.3.2
Unique NamemRNA_D-mesarthrocarpus_Contig950.3.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 564 bits (1453), Expect = 5.470e-182
Identity = 406/872 (46.56%), Postives = 507/872 (58.14%), Query Frame = 2
Query:  260 MKLKGDALHYQHLVDQLLSRDDPETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRNLVGTVRDLDENGKVSREGKLRQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEG---ALFAIDDLTHGKP-KMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQA------WFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGH----QGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRG--VMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKLGAIKEQAAAWGRVLSSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSI----------TPLKPPTKAGGLGCGSNPLDSFFPFDPYLLRRSHVYIGSTYNMWKAHKDNIPPAEEMRRSPSKRRSR-PLGXXXXXXXXXXXXXXXXXXXXXXXDLEGAQSGEEQHGLSQMDDQSFSMRQTAAGLLSRARLGHRFGSIGDGDS---------------------------------EELAVSQKMASSYISE-MSVTPNSSVGEVGSMG---GCIMATSHTDD-VRWG-------GAFDEACFHEDV 2659
            MK KGD  HYQHLV QLL+RDDPETLWRLY+GLS CVT ISQ P+EF +L+DA+FRF+W GS +I+++FSGLL  L+SAN T +VPAMH L+RNLV T RDLD  G V      RQ ++H  L+ASL+LVPSG SKLF ++   YP RR+ AE+L++YA  ALR+++YAPL+EE V+RLIIE+ LEIDVEIKIMD+G+AV+D++E    ALF +DD+  G   K     ++VDEMA++LDGVM+V+F YLD RL   A            AG    +  A ++   +G   G  +G ++G      G  Q +E V ++   SLL+VF + +LPTHRSKFVQFV+FF   RA  +  AL SKL+  L + S PKL +QSSVAYLAS+LARASFV    +S  +  LL+WA  YL+++  A VA    +   GTP     +TP+    + +RP SWH    R    G   G  VM    SA A++                        +H LFYSVCQA+FY+MCFRG+ELA +     QA  W R+L+ PL PLR CLDTVR+EFARLCC      L   LL+HL  ++EE R      I VGSS + S    S           TP +  TKAGGLG GSNPLDSFFPFDPYLLRRSHVYI   YN WKA  D+       RRS     +R P G   XXXXXXXXXXXXXXXXXXXX                MD  S S R  A+GL  RAR  H+                                          E   +S+KMA +YI+E MSVTP SSV     MG   G  M++S  DD + WG       G  D+A FHE+V
Sbjct:    1 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTLKGRGGGSTGGMQGMEPVARL-LKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYADASVATP--VQALGTPSSKGFETPVATRVR-ARPQSWHGNHPRRSANGGDGGGGVMQAPMSAMAAR-SGXXXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEE-RSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRV-TKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDQMYNTWKAQDDSS------RRSTKSSGARTPAGAGDXXXXXXXXXXXXXXXXXXXXXXXXX--------XXDMDASSMSFRDGASGL--RARSLHQRNEAAKKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARRMSRKMADTYITESMSVTPASSVAVGSLMGRSLGQAMSSSFADDGLVWGTGAGGAAGTPDDAFFHENV 849          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 449 bits (1154), Expect = 8.710e-142
Identity = 271/553 (49.01%), Postives = 353/553 (63.83%), Query Frame = 2
Query:  227 PVVKFLQNALNMKLKGDALHYQHLVDQLLSRDDPETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRNLVGTVRDLDENGKVSREGKLRQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEG---ALFAIDDLTHGKPKMNSMN-EQVDEMAERLDGVMVVLFGYLDHRLAGEAQA------WFSRAGYQPNDMPAGSENAEEGKREG------EGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRG--VMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKLGAIKEQA 1831
            PVVKFLQ+AL MK KGD  HYQHLV QLL+RDDPETLWRLY+GLS CVT ISQ P+EF +L+DA+FRF+W GS +I+++FSGLL  L+SAN T +VPAMH L+RNLV T RDLD  G V      RQ ++H  L+ASL+LVPSG SKLF ++   YP RR+ AE+L++YA  ALR+++YAPL+EE V+RLIIE+ LEIDVEIKIMD+G+AVVD+++    ALF +DD+  G       + ++VDEMA++LDGVM+V+F YLD RL   A          S AG    +  A ++   +G   G      +G GG  G  G  Q +E V ++   SLLVVF + +LPTHRSKFVQFV+FF   RA  +  AL SKL+  L + S PKL +QSSVAYLAS++ARASFV    +S  +  LL+WA  YL+++  A +A    +   GTP     +TP+    + +RP SWH    R    G   G  ++    SA AS+                        +H LFYSVCQA+FY+MCFRG+ELA +     QA
Sbjct:   33 PVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQSTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETSVAGDGGCEAVAAAQAVLQGDEAGSDSCTPKGRGG--GSTGGMQGMEPVARL-LKSLLVVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLKDESRPKLTRQSSVAYLASFVARASFVDPSLVSTAVQSLLDWAGQYLDQYADASIATP--VQALGTPSSKGFETPVATRVR-ARPQSWHGNHPRRSANGGDGGGGMIDAPMSAVASRSGVGGXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQA 579          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A8K1C8A3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8A3_PYTOL)

HSP 1 Score: 228 bits (581), Expect = 5.830e-59
Identity = 186/716 (25.98%), Postives = 313/716 (43.72%), Query Frame = 2
Query:  212 DLDIRPVVKFLQNALNMKLKGDALHYQHLVDQL---LSRDDPETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRNLVG-----------------------TVRDLDENGK------------------VSREGKLRQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDDLTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRG--EAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKLGAIKE--QAAAWGRVLSSPLN--PLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTE-----EGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCG-SNPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            D D+  + +F++NAL++ LKG+A +Y +L+ QL     + +  T  R++  L  C++T+++ P+ + +L+D +F+F++   +  I+A++  ++ L+S+N  Y++P +  L+RNL                         TV  +   G                   V +  K R   +H+ L+  L LVP+  + LFS+++  +P +R+ A     Y    L +  Y P L+E++  LII+  + +DVEIK+ +  + V   D+   F  DDL  G         QVDEMA++LD +MV++F Y+D ++   + +                                         VE   ++    LL VF   +L THRSK+ QF++FF C           S+LL    +P TP   + S  AYLAS+LARA F+    + + L  LL+W    ++ ++   V    +       GRG  EA+         S PG++H +                                                   ++ S  Q   Y++CFRG E+A+     E  +   W R+L +P +  PL +C  TV  EF      +  + +    +D + +        + R  KG++ +  ++  PSA     + + P + +GG   G   PL++FFPFDPYLLRRS  +IG  Y  WK
Sbjct:   20 DEDLDTLQQFIENALDLMLKGNATNYLYLIQQLSGAAGKSNKNTRRRIFQTLPRCISTMAKEPKAYHQLLDVLFKFDFLCERDEIDAYTSFIVHLVSSNTVYVLPTLQMLLRNLCRPAQLPPALAAAVAAQAKPAPAPVTVGKIAIGGSFGAPVAPVPAAPTPEPIDVEKLIKERFADVHKTLQRVLKLVPTASNALFSVVAEHFPHKRLDAPFQIAYLANVLELSTYVPGLQERIFGLIIDHLVAVDVEIKLDEKEEDVFTMDD---FLDDDLLPGD------GTQVDEMADKLDQMMVLMFEYIDRQVGRSSSS------------------------------------ATLSNVEQAAQI-FKFLLKVFEHSILNTHRSKYPQFLLFFTCQMDPQFQDIFISQLLTASLDPQTPPSTRHSCGAYLASFLARAKFISVSYIQKALYHLLKWMHDQMDVYDTLFVPSQPDEDSSSVDGRGGIEAEAAALEPKNGSEPGAFHES---------------------------------------------------IYISTLQTVCYLICFRGLEVAQAENGYEFLRTLGWERLLITPTSYCPLAFCQQTVATEFLNFAETF--DLVSEECIDQVDQAINSVGKLQKRSSKGSKSMERTAPPPSA-----SSMMPSSTSGGSVLGLRQPLETFFPFDPYLLRRSFRFIGPLYLYWK 631          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A662XUA0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA0_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.440e-55
Identity = 196/728 (26.92%), Postives = 321/728 (44.09%), Query Frame = 2
Query:  167 VAMPASVQTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRD-DPETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEA--FSGLLISLISANGTYIVPAMHQLMRNL-------VGTVRDLDENGKVSREGKLRQ------------------------------------EHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAK----LGAIKEQAAAWGRVL--SSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCGSNPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            VA P ++ T +  E +  +  +  F++NAL++ LKG+   Y +LV QL +    P T  +++  L  C++T+++ P  +  L+D +F+F+       +EA  ++  ++ L+S+N  Y++P +H L+RNL       +          + + E +L++                                    +  H  LE  L+LVP+  + LF ++   +P +R+ A     Y    LR+  Y   L E+V+ L+I++ + IDVEIK+        DE E  +F +DD L       +  + QVDEMA++LD +M+V+F +++   + E+ A          D+  G +  +                 VRQ            LL VF   +L THRSK+ QF++F++C           S+LL T  +P TP   +QS  AYLAS+LARA ++    L + L  LL+W    ++ ++ A                 + Q  L             +AR          G  +V R     +VL   ++  +  +         G +  +F S  Q   Y++CFRG E+A+     G    ++  W R+L  SS   PL +C  TV  EF  L   +  + +  S LD +    ++   G  A+    SS A  ++  S  P      A  L     PL++FFPFDPYLLRRS  +IG  Y  WK
Sbjct:   86 VAAPTALPTPSISEEE--VVSMHHFIENALDLLLKGNGKSYHYLVQQLTAASAPPATRRKIFRALPRCISTMAREPRAYRALLDVLFKFDLLAGDDPLEAQDYARFVVHLVSSNTVYVIPTLHMLVRNLCRPQLHQLPPALQTQARAEAAAEAELKKPSNGVTIAIGGSMASPVPTEEKKKAPSLDERIQMRFDAAHATLERVLALVPTAANVLFPVLCEHFPHKRMDAATQVAYLRNVLRVTTYVSGLRERVLALVIDQLVAIDVEIKL--------DESEEDVFTMDDFLDDDLLPPDDASRQVDEMADKLDQMMLVMFEHIEQAGSVESPA--------STDLSNGEKELD-----------------VRQAALIF-----KYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDVFISQLLATSLDPQTPPTTRQSCAAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVYDAAQQ---------------QLQEQL-------------DARV---------GESAVDRE---ERVLEEAEALETSEAR--------GFQESIFISTLQTVCYLLCFRGLEIARSDDGAGYDFLRSLGWERLLVTSSGYCPLAFCQQTVATEFLNLVETF--DLVSESCLDRV----DQAIGGVSAK----SSKAAKSMERSTKPTVSSASAATLLGQRQPLETFFPFDPYLLRRSFRFIGPLYLYWK 715          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A3R7JLG2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JLG2_9STRA)

HSP 1 Score: 216 bits (550), Expect = 7.130e-55
Identity = 193/729 (26.47%), Postives = 312/729 (42.80%), Query Frame = 2
Query:  164 SVAMPASVQTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQL-LSRDDPETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRNL---------------------------------VG------------TVRDLDENGKVSREGKLRQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELA----KLGAIKEQAAAWGRVL--SSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCGSNPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            S A  A+    AS  ++ ++  + +F++NAL++ +KG+   YQ+L+ QL LS     T  +++  L  C++T+++ P  +  L+D +F+F+     Q +E +   ++ L+S+N  Y+VP +H L+RNL                                 +G             V  +++   +    + R E +H  L   L+LVP+  + LF ++   +P +R+ A+    Y    LR+  Y   L E+V+ L+I++ + IDVEIK+        DE E  +F +DD L       +  + QVDEMA++LD +M+V+F ++     G+  A  S      +D  A  E++        G   V+ H            V    LL VF   +L THRSK+ QF++F++C           S+LL T  +P  P   +QS  AYLAS+L RA ++    L + L  LL+W       H+  D+    +  L+                        +   AR+      R             +L   ++     S         G +  ++ S  Q   Y++CFRG E++      G    ++  W R+L  S+   PL +C  TV  EF  L             LD + E   E        +   SS +  ++  S  P      A  L     PL++FFPFDPYLLRRS  YIG  Y  WK
Sbjct:    4 SAASLAAALPVASAPSEEEVASMHQFIENALDLLIKGNVKSYQYLIQQLTLSTAPVATRRKIFRALPRCISTMAKEPRAYRALLDVLFKFDLINDYQEVEDYISFVVHLVSSNTVYVVPTLHMLVRNLCRPQPHQLPPDLRSLLEEESEEPKKKTIAGGITIGGSFGAVAEVTTPVVESVNKGPNLEERIQKRFEAVHETLGRVLALVPTAANFLFPVLCEHFPHKRLDADTQVAYLRNVLRVTSYMSGLRERVLGLVIDQLVAIDVEIKL--------DESEEDVFTMDDFLDDDLLPPDDASHQVDEMADKLDRMMLVMFEHI-----GQISASISTQ----SDAVASVESSN-------GKTSVDVHHAA---------VIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQMPPTTRQSCAAYLASFLGRAKYISVAYLQKALYHLLKWL------HDQMDIYDAAHQKLQ------------------------NEQEARNGESAAERDEC----------LLEESEALEPSDSR--------GFQDNIYISTLQTVCYLVCFRGLEISCSDDGTGYEFLRSLGWERLLVTSTGYCPLAFCQQTVATEFLNLV----------ETLDLVSESCLERVDQAVGGVSASSSKSAKSMERSKKPTSASASAAALLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWK 641          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A0W8CKU1_PHYNI (RNA polymerase I-specific transcription initiation factor RRN3 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CKU1_PHYNI)

HSP 1 Score: 218 bits (555), Expect = 1.230e-54
Identity = 204/774 (26.36%), Postives = 330/774 (42.64%), Query Frame = 2
Query:   56 PLGVTFQRGGRRCFHVQGGSFRL*ELKPEVASHQCDSVAMPASVQTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRDDP-ETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNW--TGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRNL-----------------VGTVRDLDENGKVSREGKL-----------------------------------RQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKL--GAIKE--QAAAWGRVL--SSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCGSNPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            PLGV F   G+     +    R  E+     +       +P+++  AAS   + ++  +  F++NAL++ +KG+A  Y +L+ QL     P  T  +++  L  C++T+++ P+ +  L+D +F+F+   +G    +E ++  ++ L+S+N  Y+VP +H L+RN+                     ++++   K ++ G +                                   R E  H+ LE  L+LVP+  + LF I+   +P +R+ A     Y    LR+  Y   L E+V+ L++++ + IDVEIK+        DE E  +F +DD L       +  + QVDEMA++LD +M+V+F +++   A  + A  S      N    G ++ +                 VRQ       V    LL VF   +L THRSK+ QF++F++C           S+LL T  +P TP   +QS  AYLAS+LARA ++    L + L  LL+W    ++ +   DVA    +  EG       +T    D                                   ++L   +   + G          G +  +F S  Q   Y++CFRG E+A    GA  E  ++  W R+L  SS   PL YC  TV  EF  L              D + E   E        +   ++ +  ++  S  P      A  L     PL++FFPFDPYLLRRS  YIG  Y  WK
Sbjct:  195 PLGVWFDAPGQLPAQSEQQQIRSSEMAGSATT-------LPSALPVAAS-PTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQAKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKL--------DESEEDMFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQSAASSSPASVSSDSVAAN----GDKDVD-----------------VRQAA-----VIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDIY---DVAHQEQLEREG-------ETAAERD----------------------------------ERLLEESEKMHTTGER--------GFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLV----------EAFDLVSEECLERVDQAIGTVSASTTKSAKSMERSKKPTAGSASASTLLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWK 864          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 210 bits (534), Expect = 1.350e-53
Identity = 196/733 (26.74%), Postives = 321/733 (43.79%), Query Frame = 2
Query:  164 SVAMPASVQTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRDDP-ETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEA--FSGLLISLISANGTYIVPAMHQLMRNL------------VGTVRDLD-----ENGKVSREGKL-------------------------RQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKL--GAIKE--QAAAWGRVLSSPLN--PLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCGS-----NPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            + ++P+++  AAS  ++ ++  +  F++NAL++ +KG+A  Y +L+ QL     P  T  +++  L  C++ +++ P  +  L+D +F+F+   S   +E   ++  ++ L+S+N  Y+VP +H L+RNL               +++ +     + G ++  G                           R E  H  LE  L+LVP+  + LF I+   +P +R+ A     Y    LR+  Y   L E+V+ L+I++ + IDVEIK+        DE E  +F +DD L       +  + QVDEMA++LD +M+V+F +++H  A  + A  S     P +  +  ++                   VRQ            LL VF   +L THRSK+ QF++F++C           S+LL T  +P TP   +QS  AYLAS+LARA ++    L + L  LL+W    ++ ++                     Q  +  D                    V  G  +  R     ++L       + G          G +  ++ S  Q   Y++CFRG E+A    GA  E  ++  W R+L +     PL YC  TV  EF              +L++    V+EE        I   S+L+  +   S+   K PT AG     +      PL++FFPFDPYLLRRS  YIG  Y  WK
Sbjct:    5 TASLPSALPVAAS-PSEQEVASMQHFIENALDLLVKGNAKSYDYLLQQLTLAPAPVATRRKIFRALPRCISAMAREPRAYRALLDVLFKFDMLASGDPLEVDDYTSFVVHLVSSNTVYVVPTLHMLVRNLRRPQTKELPPDLKAQIQEQETLKPVKTGAIAIGGSFGADVAAVPTPLVEPKAPSLDERIQARFEAAHATLERVLALVPTATNVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVIDQLVAIDVEIKL--------DESEEDVFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEHSAASSSPA--SVETVAPTETSSNEKDVN-----------------VRQAALIF-----KHLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVYDAVH------------------QEQMDQDE-------------------VRNGESAAERE---ERLLEESLKMETNGER--------GFQESIYISTLQTVCYLVCFRGLEIATNDDGAGYEFLRSLGWERLLVAGTGYCPLAYCQQTVATEFL-------------NLVETFDLVSEECLERVDQTIGTVSALSIKSAK-SMERSKKPT-AGSAPAATLLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWK 641          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A484EDU3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDU3_BRELC)

HSP 1 Score: 211 bits (537), Expect = 2.820e-53
Identity = 193/732 (26.37%), Postives = 314/732 (42.90%), Query Frame = 2
Query:  182 SVQTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRDDP-ETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEA--FSGLLISLISANGTYIVPAMHQLMRNL--------------VGTVRDLDENGK--------------------VSREGKL------RQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELA----KLGAIKEQAAAWGRVL--SSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCG----SNPLDSFFPFDPYLLRRSHVYIGSTYNMWKAHKDNIPP 2215
            S++  +    + ++  + +F++NAL++ +KG+   YQ+L+ QL     P  T  ++   L  C++TI++ P+ +  L+D +F+F+   S  + EA  ++  +I L+S+N TY+ P +H L RN+              +G   D  +N                      V++E  L      R    H++LE  ++LVP+  + LF I+   +P +R+ A     Y    LRI +Y   L E+V+ L+I++ + IDVEIK+        DE E  +F +DD L       +  ++QVD+MA++LD +M+V+F Y++   A  +  + +       D                     +G   +RQ            LL VF   +L THRSK+ QF++F++C           S+LL    +P TP  ++QS  AYLAS+LARA ++    L + L  LL+W       H+  D+                      +D                      +    V    +AS++    +  +       A     G +  +F S  Q   Y++CFRG E+A      G    ++  W R+L  S    PL YC  TV  EF  L                 +++  +    +  Q +  +S++ S    S+   K PT              PL++FFPFDPYLLRRS  YIG  Y  WK H D   P
Sbjct:    7 SLRAVSVTPTEEEVANMHQFIENALDLVIKGNTKSYQYLIQQLTVLPPPIATRRKILRALLRCISTIARDPQAYRVLLDVLFKFDLLASGDVSEAEDYATFIIHLVSSNTTYVWPTLHMLARNMGISQEKELPPDLRALGKTEDALKNLSYSTASGSLGSNSIEPGTPVLVTKEPSLQECILARYAAAHQMLERIITLVPTASNVLFPILCEHFPHKRMDAPTQVAYLRNVLRITEYVGGLRERVLGLVIDQLVAIDVEIKL--------DESEEDVFTMDDFLDDNMLAPDDASQQVDKMADKLDQMMLVMFKYIEECAASSSSTFSTGGSVATIDS-------------------TDGEVDIRQAALVF-----KYLLKVFEHSILNTHRSKYPQFLLFYVCRIDPQFQDIFISQLLAASLDPQTPATMRQSCGAYLASFLARAKYISVAYLQKALYHLLKWL------HDQMDI----------------------YDE-------------------TLQEQQRVCDPYAASEIYTELRKESQNVEITGAH----GFQENIFVSSLQTVCYMLCFRGLEIAISDNGTGYEFLRSLGWERLLITSDGYCPLAYCQQTVATEFLNLA--------------EAFDLVSDECLERVDQAIGSASVSTSKSSKSMERSKKPTSGSSTATTLLDQRQPLETFFPFDPYLLRRSFQYIGPLYLYWK-HADPTSP 640          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: D0NT31_PHYIT (RNA polymerase I-specific transcription initiation factor rrn3, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0NT31_PHYIT)

HSP 1 Score: 209 bits (532), Expect = 1.440e-52
Identity = 200/736 (27.17%), Postives = 309/736 (41.98%), Query Frame = 2
Query:  188 QTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRDDP-ETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNW--TGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRNL-------------------------------------------VGTVRDLDENGKVSREGK---------LRQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAK----LGAIKEQAAAWGRVL--SSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQI-LVGSSLAPSALLGSITPLKPPTKAGGLGCGS-----NPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            Q  A    + ++  +  F++NAL++ +KG+A  YQ+L+ QL     P  T  +++  L  C++T+++ P+ +  L+D +F+F+   +G    +E ++  ++ L+S+N  Y+VP +H L+RN+                                             TV       KV  E K          R E  H  LE  L+LVP+  + LF I+   +P +R+ A     Y    LR+  Y   L E+V+ L++++ + IDVEIK+        DE E  +F +DD L       +  + QVDEMA++LD +M+V+F +++           S     P    + S  +  G +          +  VRQ            LL VF   +L THRSK+ QF++F++C           S+LL T  +P TP   +QS  AYLAS+LARA ++    L + L  LL+W       H+  DV    +   +   G   A+                                         ++L   ++    G          G +  +F S  Q   Y++CFRG E+A      G    ++  W R+L  S    PL YC  TV  EF              +L++    V+EE        I  V SS + SA   S+   K PT AG     +      PL++FFPFDPYLLRRS  YIG  Y  WK
Sbjct:   12 QPVAVSPTEEEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLVPPPVATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPQEKELPPDLRVLAQTEQKNEEETTKKSTKAGGISIGGSFGADTVATPTPVAKVVHEAKGPSLDERIQSRFEAAHETLERVLTLVPTAANVLFPILCEHFPHKRMDASTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKL--------DESEEDMFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ----------SAVSSSPTSASSDSVASSTGDK----------NLDVRQAALIF-----KYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWL------HDQMDVYDAAHQEQQERDGETAAERD--------------------------------------ERLLEESENMGITGDR--------GFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYDFLRSLGWERLLVTSGGYCPLAYCQQTVATEFL-------------NLVEAFDLVSEECLERVDQAIGTVSSSTSKSAK--SMERSKKPT-AGSASASTLLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWK 646          
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Match: A0A6A3TZ42_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TZ42_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.280e-51
Identity = 203/727 (27.92%), Postives = 317/727 (43.60%), Query Frame = 2
Query:  194 AASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRDDP-ETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNW--TGSQQIIEAFSGLLISLISANGTYIVPAMHQLMRN--------LVGTVRDL----DENGKVSREGKL----------------------------------RQEHIHRVLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPLLEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDD-LTHGKPKMNSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAGSENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTHRSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLASYLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGRGEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPHPQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKL--GAIKE--QAAAWGRVL--SSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWEVTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCGS-----NPLDSFFPFDPYLLRRSHVYIGSTYNMWK 2191
            +A+   + ++  +  F++NAL++ +KG+A  YQ+L+ QL     P  T  +++  L  C++T+++ P  +  L+D +F+ +   +G    +E ++  ++ L+S+N  Y++PA+H L+RN        L   +R L    DE  K +  G +                                  R E  H+ LE  L+LVP+  + LF I+   +P +R+ A     Y    LR+  Y   L E+V+ LII++ + IDVEIK+        DE E  +F +DD L       N  + QVDEMA++LD +M+V+F +++   A       +  G +  D                          VRQ            LL VF   +L THRSK+ QF++F++C           S+LL +  +P TP   +QS  AYLAS+LARA ++    L + L  LL+W    ++ ++ A    +          R EA+                             G  SV R     ++L   +   +  +   A+      +  ++ S  Q   Y++CFRG E+A    GA  E  ++  W R+L  S+   PL YC  TV  EF  L   +   NL          V+EE        I   SSL  S    S+   K PT AG     +      PL++FFPFDPYLLR S  YIG +Y  WK
Sbjct:    4 SATSPTEQEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLMPPPVATRRKIFRALPRCISTMAREPRAYRALLDVLFKCDLLASGDPLEVEDYTSFIVHLVSSNTVYVLPALHMLVRNMRRPQGKELPPDLRALEDKKDEPKKPATTGGITIGESFGASVAAPTPVAEVVQEAQGSSLDERIQTRFEAAHKTLERVLALVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLIIDQLVAIDVEIKL--------DESEEDVFTMDDFLDDDLLPPNDSSRQVDEMADKLDQMMLVMFEHIEQCSASSETVTDASNGEKDVD--------------------------VRQAALIF-----KYLLKVFEHSILNTHRSKYPQFLLFYVCRVDPQFQDVFISQLLSSSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDIYDAAHQEQLD---------RDEARE----------------------------GESSVERD---ERLLEEREKRETHPTGDQAF------QESIYISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSTGYCPLAYCQQTVATEFLNLVEAF---NL----------VSEECLERVDQAIGTVSSLT-SKSTKSMERSKKPT-AGSAPASTLLGQRQPLETFFPFDPYLLRLSFRYIGPSYLYWK 630          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig950.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL61_ECTSI5.470e-18246.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAN6_9PHAE8.710e-14249.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1C8A3_PYTOL5.830e-5925.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662XUA0_9STRA1.440e-5526.92Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3R7JLG2_9STRA7.130e-5526.47Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A0W8CKU1_PHYNI1.230e-5426.36RNA polymerase I-specific transcription initiation... [more]
H3GYT5_PHYRM1.350e-5326.74Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484EDU3_BRELC2.820e-5326.37Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
D0NT31_PHYIT1.440e-5227.17RNA polymerase I-specific transcription initiation... [more]
A0A6A3TZ42_9STRA1.280e-5127.92Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig950contigD-mesarthrocarpus_Contig950:3779..14496 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FL61
Preferred nameRRN3
PFAMsRRN3
Model size3377
Max annot lvl2759|Eukaryota
KEGG koko:K15216
Hectar predicted targeting categoryother localisation
GOsGO:0000120,GO:0000182,GO:0000976,GO:0001013,GO:0001042,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001167,GO:0001169,GO:0001179,GO:0001181,GO:0001188,GO:0001701,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007028,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009303,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0023051,GO:0023057,GO:0030154,GO:0030718,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036099,GO:0042254,GO:0042592,GO:0042790,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044798,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0098781,GO:0120035,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901797,GO:1902253,GO:1902254,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000112,GO:2000142,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons13
Evalue2.74e-186
EggNOG OGsKOG2434@1|root,KOG2434@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-19_005380.1
Descriptionrna polymerase i-specific transcription initiation factor
Cds size2511
COG categoryO
BRITEko00000,ko03021
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791104.7531588-UTR-D-mesarthrocarpus_Contig950:3778..39501680791104.7531588-UTR-D-mesarthrocarpus_Contig950:3778..3950Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig950 3779..3950 +
1680791104.914469-UTR-D-mesarthrocarpus_Contig950:13802..144961680791104.914469-UTR-D-mesarthrocarpus_Contig950:13802..14496Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig950 13803..14496 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791104.7680113-CDS-D-mesarthrocarpus_Contig950:3950..40491680791104.7680113-CDS-D-mesarthrocarpus_Contig950:3950..4049Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 3951..4049 +
1680791104.7783139-CDS-D-mesarthrocarpus_Contig950:4451..45671680791104.7783139-CDS-D-mesarthrocarpus_Contig950:4451..4567Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 4452..4567 +
1680791104.7915614-CDS-D-mesarthrocarpus_Contig950:4758..49401680791104.7915614-CDS-D-mesarthrocarpus_Contig950:4758..4940Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 4759..4940 +
1680791104.8016376-CDS-D-mesarthrocarpus_Contig950:5911..61201680791104.8016376-CDS-D-mesarthrocarpus_Contig950:5911..6120Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 5912..6120 +
1680791104.811739-CDS-D-mesarthrocarpus_Contig950:6792..68491680791104.811739-CDS-D-mesarthrocarpus_Contig950:6792..6849Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 6793..6849 +
1680791104.8216922-CDS-D-mesarthrocarpus_Contig950:7651..77561680791104.8216922-CDS-D-mesarthrocarpus_Contig950:7651..7756Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 7652..7756 +
1680791104.8348606-CDS-D-mesarthrocarpus_Contig950:8145..83851680791104.8348606-CDS-D-mesarthrocarpus_Contig950:8145..8385Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 8146..8385 +
1680791104.847557-CDS-D-mesarthrocarpus_Contig950:8793..89491680791104.847557-CDS-D-mesarthrocarpus_Contig950:8793..8949Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 8794..8949 +
1680791104.8584585-CDS-D-mesarthrocarpus_Contig950:9551..97491680791104.8584585-CDS-D-mesarthrocarpus_Contig950:9551..9749Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 9552..9749 +
1680791104.8690183-CDS-D-mesarthrocarpus_Contig950:11126..114201680791104.8690183-CDS-D-mesarthrocarpus_Contig950:11126..11420Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 11127..11420 +
1680791104.8797104-CDS-D-mesarthrocarpus_Contig950:11971..121421680791104.8797104-CDS-D-mesarthrocarpus_Contig950:11971..12142Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 11972..12142 +
1680791104.890326-CDS-D-mesarthrocarpus_Contig950:12618..128101680791104.890326-CDS-D-mesarthrocarpus_Contig950:12618..12810Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 12619..12810 +
1680791104.9024787-CDS-D-mesarthrocarpus_Contig950:13310..138021680791104.9024787-CDS-D-mesarthrocarpus_Contig950:13310..13802Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig950 13311..13802 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig950.3.2prot_D-mesarthrocarpus_Contig950.3.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig950 3951..13802 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig950.3.2

>prot_D-mesarthrocarpus_Contig950.3.2 ID=prot_D-mesarthrocarpus_Contig950.3.2|Name=mRNA_D-mesarthrocarpus_Contig950.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=837bp
MPASVQTAASLEADLDIRPVVKFLQNALNMKLKGDALHYQHLVDQLLSRD
DPETLWRLYVGLSLCVTTISQSPEEFDKLIDAVFRFNWTGSQQIIEAFSG
LLISLISANGTYIVPAMHQLMRNLVGTVRDLDENGKVSREGKLRQEHIHR
VLEASLSLVPSGCSKLFSIISARYPFRRVSAELLANYAHQALRIIKYAPL
LEEKVVRLIIERSLEIDVEIKIMDSGDAVVDEDEGALFAIDDLTHGKPKM
NSMNEQVDEMAERLDGVMVVLFGYLDHRLAGEAQAWFSRAGYQPNDMPAG
SENAEEGKREGEGAGGVEGHQGVRQRVETVGKVGSSSLLVVFGDVVLPTH
RSKFVQFVVFFICARASWMSSALCSKLLDTLHEPSTPKLIQQSSVAYLAS
YLARASFVKGEALSRPLSGLLEWAQAYLEEHEGADVAGVGNIGLEGTPGR
GEAQTPLPFDPKPSRPGSWHNARARSRTRGVTRGVMSVTRSASASKVLPH
PQSFTSPGSACSAWRVGGGEEHRLFYSVCQASFYIMCFRGEELAKLGAIK
EQAAAWGRVLSSPLNPLRYCLDTVRKEFARLCCHYFSENLQPSLLDHLWE
VTEEGRHGKGAQILVGSSLAPSALLGSITPLKPPTKAGGLGCGSNPLDSF
FPFDPYLLRRSHVYIGSTYNMWKAHKDNIPPAEEMRRSPSKRRSRPLGLG
LGLESNSSSGSDTDDSSSSSSDLEGAQSGEEQHGLSQMDDQSFSMRQTAA
GLLSRARLGHRFGSIGDGDSEELAVSQKMASSYISEMSVTPNSSVGEVGS
MGGCIMATSHTDDVRWGGAFDEACFHEDVPLSSSQS*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig950:3779..14496+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig950.3.2 ID=mRNA_D-mesarthrocarpus_Contig950.3.2|Name=mRNA_D-mesarthrocarpus_Contig950.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=10718bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig950:3779..14496+ (Discosporangium mesarthrocarpum MT17_79)
AGTCCCTGTTTCCCTTTGCACTTTAGGGTTAGGGTTAGGTCTGGGTGATC TGGCTCCTCTCGGTGTCACATTTCAACGTGGAGGCCGACGGTGTTTCCAC GTCCAGGGGGGTAGCTTCAGGCTCTGAGAGTTGAAACCTGAAGTCGCTTC CCATCAGTGCGATTCTGTAGCCATGCCAGCCTCCGTTCAGACAGCGGCGT CACTGGAGGCCGATCTTGACATCCGCCCTGTGGTGAAGTTCCTCCAAAAT GCCCTCAACATGAAATTGAAGGTGATTGACTGTTTGTGTGAGGTGGTCCG AAAGCATATTGAGCATCGACAATGTTTTTGACGTTCAGCCTCTGATGTGT TCGAACAGGGTCCCACAAGATTGATCGATTGCGACTCCTTCAAAGAGGCC CCTATGAAAAAGCAAGTCTAGTAGCAGGGGCTACTGAGATTTCCCATAAT GTCTAGGAAGTGTATCCATGGTTGAGACTTCCGTTCCTTTGAGGTTAGCG ACACAAATTCATGGCATCTTCTTTCGGCCCTTTTTCTTCAACCTCTCAGC AGACACTTTACCCTTCGGAAAGATGTTGCTGTTTTCGTGCTGCACCAGAG ATGCTAGGCAAGCCAACAGGCACTTCTTCCTGACCCCCCTTGAATCTGGG CGCCCGTCGGCTGCCTTTCACAGGGAGACGCTCTCCACTATCAGCACCTT GTGGATCAACTGCTGTCGCGAGACGATCCCGAGACGCTTTGGCGCCTCTA CGTGGGACTCTCTCTTTGTGTCACTACCATATCTCAGAGGTGTGGCGATT GCCATAAGACGGTTGAAGTCGGAAAATGTTTGGATGCACTTCCTTTAAAG TTTTATTTTGCCTGTCGTCCTTGACGCATTTCCCTAATCCCTTCTATCAA CGTACACATCTCGTGCATCGTTGATTAACATCTTATTCATTGTGGTATCC TCCTCATATTATGGTCTGACGCATCATCAGTCCGGAGGAGTTCGACAAAC TGATCGATGCAGTCTTCCGCTTTAACTGGACGGGGTCACAGCAAATCATT GAGGCATTTTCCGGTCTGTTGATCAGCCTCATCTCTGCCAATGGGACGTA CATCGTTCCCGCTATGCATCAACTCATGCGGAACCTGGTTGGCACAGTCA GGGATCTTGACGGTGAGGTTTTGTTTATTTAAGTTAGACTCTAATACCTG ATCTCAGCTTTGAATAGTTGACTTGTAGGGGAAGTTTGTGGGGTAGAGCA AGTCTAAGGGTATCGCTAGGGTGGGATTGAGACTGAGATTAAGAGTTTGG GTAACGGAGAAGCCTTTTTGGAAGCCCACGGCATCCAATACGCGCCTGAC AGACCCCACTGTACTGGAGTGCTTTTAAATGTTTTTGCTTTGAATGGGTA TATGGATGTGATTCCCTTGAGGGAGGTGTGTTTTGGTTAAACCTGACTCC ACTATGCAATGGTGGCATCGCATTCCTTGTTCCCTACACAGTCAAGAGGT TTAAAATATTGGCCCGGGGTATAGGTTTCAATAACAAGCTGCAATGAACA TCTCTCTTGGCACCAAAAAGTCACAAGAGGTAGAGGTGAAAGGGTAAATG GATAACTGTCCCTTCAGGACCTTCGAGGGACGAGGTGGATTGTTGTCTAT TTATGATGGACATTACTGCAGTACGACTACCCTATAACTTGGAAGCATCT GTATAATGGGTCTCAGCCTTCTGCGAACACTTCTGTTGCCAACACCCTGT CTATTCTCACTTCCCAATGTGTAACCCTAACCCTAATGTGTTATTATTAA TATTTACCAATGTGTTATTTTTGTGCAGTTTGCTGTCCACCCATCCAACA TTGCCTCCCTCCTCTCCTGAGAAAGAGACAAGGAAAGCAACGCCACCATT GCAATTCCATTACCATGCTGGTAGGGTTAGGGCTCGGGACCCATGGGGTT GAACAAACACATGGTAATGTGGTGTATGGGGCACAAGTCTGCATGCACGT ACATACTCTTCACTTGGGCTGTACACACCACACACTGTGTAGTGTGACCT AGTCCATTAGGGTTAGGGTTAGGCGTGATTGTTCGCCCCCTCTAACCCTA ACCCTAAAATGTGTTTGTCATTAATGTGCATAGAGAATGGCAAGGTGTCC AGAGAAGGCAAGCTACGACAAGAGCACATCCATCGGGTCCTGGAAGCCAG TCTTTCTCTTGTCCCCAGTGGCTGCTCCAAGCTCTTCAGCATCATTAGTG CTAGGTACCCTTTCCGCAGGGTGTCTGCAGAGCTCTTGGCCAACTATGCA CACCAGGCTCTAAGAATAATAAAGTATGCACCCCTCCTGGAGGTGAGAAT GTTGAACCCTAACCCTAACCTTGTACCAGCGATGTACCATGGGGTATGTG TTTGACTTTATCCCAGCCGCAGCATGGTGTTTTTTGTTTTGGATTGGCAC TGGGGTTGGGGTTGGATCGGCAGCACAGCACAGTAAGTGAGTGGGAAGGG GCACAAAACACAGGTTTTTGTTTTGGGGCTTGTTCCAACCAGAGAAAAAG TGATCTGTTCTTTTTTTGCATTCTACCTCCTGCTTAAGAAGCACTTTCTT GTGCTTAATAGAAGCAGTGTAGCAGTTTAGGCATTGACTCAATTTACTCT CACTCTGATCGTCTTACTCTGATCATCTTACTCTAATCATATTTCTCTAA TCATTGTGTACACAATGATATAACCATAGCAATCTCATTGCACTTGTGAC TGCTTGAACCAACAATGTATCCTTGGAGCTGCAACTGCCTAACCTGTCAT GCGATCATCCACATATGACTCTTGATGTCTTTTGTGATGATGTCATGATG ATGCCAACTCACTCTGATTAGAACTACCTCTAGCTATAACATTCTGTCTC ATCCATGGATTCCTGACTCCTGCTCTGTCTTCTTTGGTTGTTTTGCACCA TGTATTGTTTTCTTTGTACTCTTTTTTTTTTTCTCTTTGTGCCCCTTGTA CTTGTTTTGTGCAGGAAAAAGTGGTGAGACTCATCATAGAAAGAAGTCTG GAGATAGATGTTGAGATCAAGGTGAGCACATGTAACCTTGCAATGGAGCT CGAATCCCAATCCTTACCGTAATTCCAACCCTCTGTGCCCCAGTGATAAT ACTTGACCTGGTACTAGGTATCACTACAAAGGATTTGGTACTAGGTGGTA CAGTACAGTACAAGTCAGCAATGAGGGATCAGCATGATATGTTATGGTTG GGTGAGGGTTGGGGTTATGGAACAAAGAACCTGCTTTCTGGTGTAGGTCT GTCCCTGCGCTAGCGCTATGCCATGCTGTCATGTATTTTTTGTGTCTGGT TTACTTTGTAAACTGTATTTTGGCTACTCAATTCAACTTCTTGAGATATT AACTTTGTATTGCCCAGCTGTTCAGAGTAGGGTTAGTGTTAGGGTTAGGG TTAGTGTGCTTTTTGCAGGTTTGCCAGCTTCTACAATCTCACCTCCTTGC TTTATCTTCTTCCTCGAGTATTACTACTAGTGACAGTAATAATAATGACA GTGATGTTGGTGTGAGGTTTATTGGCAATGTCCGTTTTCCATAATGATTG TGACTGTTATTTTTATCACTGGGATTAATACAAATAACAAATGATAGTAT TGTGGCATAAAATAGTGTTGATTGTGTTTTTCCAATTCATTGACCTAACC CTCACCCGAACCCTGTCCCTTGATAAGGCGTTGCCCATCCGACACTATCC TTACGGTAACACTACGGTTACCTTACTGCTACCTTGCCGTTACTGAAATC TGACAACGTGGTTGTTTTTTTTTTGATGGTGGGATATGATGTGCATGATG GATATGATGGATATGGGAGACAGATCATGGACTCAGGGGATGCTGTGGTT GATGAAGATGAGGGTGCTCTGTTTGCCATTGATGACCTCACTCATGGAAA GCCAAAGATGAACTCCATGAACGAGCAGGTGACTCTCAAACTCATGAGTA ACTTTCAAAAACTCAATGTTACAGTACCCACTTGAGGAGCAAGTTCCTTT TGAGATACACTATGTAGAGCCCGAACCCTAACCCTAAGTTGCAAGTCCCT TTTTGAAGTGACCTTTTGTCAGTACCTTCTGCTCTACAGCACTGGACTTT TTCTTCGCTTCTTGTATACAACAAAAGCCCTATAACCCTAACCCTAACCC TAACCCCCCAGGGAGCGAGGTCAATTGTTATGGTGTACTATGTACCGTTT TGTAAGCTGTGCTTCGGCATTATTATTCTTATTTTTAGCACTTTAAAGAG TTTGTATTCTTCTTCTTCTTACTGTGCACTACGCTTCACCATTGATTGTG TTCAAATTGTGCCAAAGGTGGATGAAATGGCGGAGAGGCTGGATGGCGTG ATGGTTGTTCTGTTCGGGTACCTTGACCACCGTCTTGCGGGAGAGGCTCA GGCGTGGTTTAGCCGGGCAGGCTACCAGCCCAATGACATGCCAGCTGGTT CGGAGAATGCTGAGGAAGGGAAAAGGGAGGGGGAGGGGGCAGGGGGAGTC GAGGGGCACCAAGGGGTCAGGCAGAGGGTTGAAACTGTCGGAAAAGTGGG CAGCAGTGTGAGGGGGGCTGATGTCACTGTCGATCGCCTCCTCCAGGTGA AGTTGAAGTTGAACACATTGAAGTTGAAGTGGAACACATTGAAGTTGAAG TGGAACATATTGAAGTTGGGGCTGGACTGTTGAGAACCATTGATGCTTGG AATCCATGGAGCTTTATCACTGTAACTTCATGCAGCTACATACAGTTACA CTCTGTCATACCAGTCACATTATCCCATATCAGTAACACAACACCATACC ACACAGTCACAGGGTTAGGGTTGCACAGGGCTGTTTCACCAGACCAACAA TGTAGAATTCCTTTTTTTTCTTCAGTTTTTCATGTTTGTGGAGTATTTGT TCATGATGAAAGCTGATCAAAGAGCCCCTTCCTCCTTTCCTCCTCCATGC CATCTGGTCCTGAAGTCCCTGCTGGTAGTGTTTGGGGATGTGGTGCTGCC CACACACAGGAGTAAATTTGTCCAGTTTGTTGTCTTCTTTATCTGTGCTC GTGCCAGCTGGATGTCTTCTGCTCTCTGTTCAAAGTTGTTGGACACCCTG CATGAGCCCTCTACTCCCAAGGTGAAGATCTGTGCAATCTGTTTTCCTTG TCCTTGTTCCTTACCCTGAAAGGGCACATCCCTTTGTAAAGTTAGTATTT TCTGGACACTTTTTGAACTCTATTTTTGCTCTAGTTGGTTCAGACCTGGG ATGTTTTACTCTGATTGCTTAGATAAGTATCAGCCTTGTATACACTTATG TGTGTATAGACAAGGAATGCCAACTATAGACAAGGTGAACATAAAGAGAG GTCTACATTAACATAACATCAACAGTATGGTGCTTGGAATTAGCAAGAGC GCTTTCATGCGGCATCAAGCCCCAGCAGGTCCTATTGGCAAATGTTTGTT GCAGACGGTCCTGCTGATTGTTGCCGGCAGACCTGCTGATTGTTACGTTG TGCTTTTTTTCAGTAAGCCAATCGACTGAACCTGCACTAGGCAGAAAAAT TCTAACAAATTTCATGTTCTTTGTGATTAGCTCTACAAGCTTGTTGTGTG GAAAAGTAGATCGGTTAAATGCGCTTGTGGTCATCTGAACTGGTAAGTGT ACACACACTACATGCAGTATACTGTGCAGTATTTTATTCTTGGAGCTAAG ATTCGCCTTTCTCTTCTTGACAGCTCATACAGCAGAGCTCTGTAGCATAC CTGGCTAGCTACCTGGCACGAGCTTCTTTTGTCAAGGGGGAAGCTCTGTC CAGGCCTCTGAGTGGCTTGTTAGAATGGGCCCAGGCCTACCTTGAGGAGC ATGAGGGTGCTGATGTTGCTGGGGTGGGTAATATCGGTCTTGAGGGGACA CCTGGTCGAGGAGAGGCTCAGGTAGGCAAGGATAAAGAAGATACCTCAAA AATGGTCAGAGGTCTGGTTAAGGGAATGGGGGTGGGGTTGACCTGTGCAT GTTCAACTGGAGTAGTCTCAACCTAGCACCACACCCTAAGTGTTTCAGAG AGAGTGGAACAGTGTTCTGACAGAACTTGTGGCACTTGTTGCTGAAACAT GGATTAATTTCCCCAGTACTAACCCTAACCCTACAGCAAAGATAACTATT TTTTGTTCCTTTAAAATGAATTGTCAAGTGTCTGACGTGTGCTCACCTTG TCACATGAACAAATACCAAGGAATCTGTAATTCTTGAGCACAGTACTTGG GAGCCATGTAGAAGAAGGGTTAGGGTTAGGGTGACACCCGGAGTGCCTCT TAGAAGTACGTGGGTCACATTAAACAAGAAAAATTAGGGGACATTTTGTA GAGTAATTTTCTGCGCTCTAAAGTCTGAGTTTTGATGGATTCGTTCACTT TTTCTTTAGACATCGCAAGTTTTGAAAATTTTAGTTTTTTTCTCTTTAAT ATTTGGTCAGACATGGATCAGGTGGGCAATGCTCACATGCTGAATGCTAA GAGAGGAAATGTTTTCTAAGTGGAAATTGGTCCAGTCAGAGGATGTTTTT ATTACTAACTAGTTACCACCCATGGCGTCATAACTGTGTAATTTGTCACC AAATTGCTGATTGTTGGACCATGCTCAGCACACAATATGCCTTGTTTGAA TAACATTGAATGAACTCGATGTGTGGCAGGAGATTTGACAAAATTCAACC TTCCTTTTACAATTCATCCAATTCCATCAATGTTTCAGTTGGTGGTAGGT AACATAACTACTGTACAGCTCTTCTAAGACATTTGATGATTTTTGTTATT ATGGTACAGCACAAAAGGGTTAGGGTTAGTAGTCCCTAACCCTAACCCTA GCCTGACCTTTTTTTATCTTCCAGTACTTCACACTGTAGTGCCAACGTCA ACCCCAACCTACTGTGGATGATTTGTGTGATAGATATGATGGATATGATG GATGTGAACACGATAAATCCATTCTTTTGTACTCGAACTGTGCATTTCCA GATGTTGCTAAAGGGTTGGGACTCTACAACCTTTAGTACTTTGTGGAGGG TATGTCCTCGAATGGTGTGCTTAGGGTTAGGGTTAGGGTTAGTTGTTTAT CCATGGTGTTCAATAGTCCTCTCCATTTGTATACCTTTCATTCCCTTGCA ATTTTCACCAGTGTATTACCTTGTCCCACTCGAACCAAAGAGAGTTTTCT TACCTGGTGCATTGCATTTCCTGTGGTGTATTGATAATAGATCTTTTACC CTGTTTTCTTGTGCCCTGTGGTGTATTGGTGTGCAGATGTCCCTGCAGAC ACCACTCCCCTTTGACCCCAAACCTAGCCGCCCCGGGTCATGGCACAATG CAAGGGCAAGATCAAGGACAAGGGGGGTGACAAGGGGGGTGATGAGTGTC ACACGTTCTGCCAGTGCCTCCAAGGTGCTGCCACACCCCCAGTCTTTCAC GTCTCCTGGGTCTGCATGCTCAGCATGGAGGGTGGGGGGGGGGGAGGAGC ACAGACTGTTCTACTCTGTCTGCCAGGCTTCCTTTTACATCATGTGCTTC AGGGGTGAGGAACTGGCGAAGTTAGGGGCAATCAAGGAACAGGTGAACAA GTGGCAAACTGTGTTCAACTTACATTTTTGTCAAGTCTATTGCACAGCTT TTGCATGTGCTTTTTGTGAGTTGGTGCCAGAGTTTGACTGTACTCTTGAG TTGATTGCTTCAAGTACTTGATACATGGAACTACATTTTAGCATTTTACC ACAGTAGTGAGTGGGGTGATCATTAGGGTTAGGGTTAGTACTACCGCACA TGGGCGATCCCGTGCATAAAGAGTAGTTTGAAGGTTTAGGGTTAATACTC CAATAGAGTAGAAAGTTCAAGATGCCAGTTACAAGACAAAAGATGCAGGT TCGCTTGGCAGGCATCATGGACTAGTAGGTGTTTTGCAACCAGGGAAAAG AAAAGGGGTAGAGTGTCTTCCAATGTGTTGCAGATGCAGCATTGGTGATA TTTTATGTTTCTATTCCGTGTACTGTGCCCAAGGCATTATCTTATTCCAT GTTTGCCCACATTATCAACTGAAGCACAGGTGTAAGGTAGTGGTCTCTCC AAATCCACCTGTAACCTTTTTCACCCATTGTGGTCTATGCCAGGCAGCAG CGTGGGGACGGGTGCTGAGTTCTCCGTTGAACCCATTAAGGTACTGCCTC GATACTGTCAGGAAAGAGTTTGCACGCCTCTGCTGTCACTACTTCAGTGA AAACCTTCAACCCAGCCTTCTAGACCACCTGTGGGAGGTTACTGAGGAGG GTCGCCATGGCAAGGTAGGTTCAGTGTCCTGTGGTAGGTGTCACATTGGT ATTAGTGAAGATGGGTTGTGATAGGCAACACTGAAGAAAGATCAAGAAGG CATGGGGGGTGGGAAGGAGGGGCTTATATATTTGTTAGCTGATCAGCGGA CATGTATTTGGGGAGGCGGTTGATGAGTAAAGACCACTTGACTCAAAAAT CTTATTTTGGAAAGTGAAAGCATCGACTCCTGTTGGTGCCCTGATTATGG TAAATTTAGGGATAGGAAAAGGGTTAAGGTTATTAGGGTTATTAGTGTAA GGGTTATTCACAAGCAAGGACATCATGACCCAAGCAAGTATCCCCTTCTT GTCCTTGGTTGCTCTTGGCTTAGAGTTGTTATTTTCATCTCCTCTCTAAG TGTATCATTTATTGTCATACTGCTGCAGTGCATTTTTCCTTTCCTCATCC CCTAACGCTAACCCCCCCAAACGATTTCGTCATGTTGCAGGGGGCTCAAA TTTTGGTTGGCTCGAGTCTTGCACCATCCGCATTACTGGGGTCAATAACC CCCCTCAAGCCTCCCACAAAAGCTGGAGGCCTTGGCTGTGGGTCAAACCC CTTGGATTCATTCTTCCCATTTGACCCATACCTGCTGAGGCGCTCACATG TCTACATTGGCAGCACATACAACATGTGGAAGGTGAAACCATGAATCACC TCCTGTTGCATCAAATGGCAAGAGTGTCAATGCCAATACTCCACCATGTA TTATCTTGTCCAATTGCAATTGCTTCAAATTTTGTCAACCATATTTCTCT GGAGGGCCTCAAAGTCTTTGGAGGCTGACATTGCACATAGGGAGAGCTCT AGATAGTTTTTGGCAACACTGCAAGATGCTTTTTTTTTACTTGAAAGTAG AGAATCTGATAGTTTTTGTCGGTACTACATGAAGTACATGAGAGGATTGG GCTCCAACTTGCTGAAAACATAAGGTCTTACGTAGGATCTTTTCAACCTA AGCTCAAGAAACTTGAATTCTCACCAGGCATTGGCCCAAGAGCTAATGTA ATATCCCCAATGTGCCCTATAATCCAAATCTCCTTACTCTGTTGGAGCTG ACGCCCTCAACTATATAATGGATCCATCTGGTTCTAATTTGACAACTAAC TGATGGTGTATTCGATGTATTCCCCGTGACAGGCACACAAGGACAATATT CCCCCTGCAGAGGAGATGAGAAGGTCTCCGAGCAAGAGGCGATCGAGACC CTTGGGGTTAGGGTTAGGGTTAGAATCTAATTCTTCATCAGGTTCCGACA CTGATGACTCGTCCTCTAGCTCCAGTGACCTGGAAGGTGCACAGAGTGGG GAGGAGCAACATGGTCTGAGTCAAATGGATGATCAGTCCTTCAGCATGCG CCAGACGGCAGCAGGGCTGCTGTCACGAGCAAGGCTTGGCCACAGGTTTG GGAGTATAGGGGATGGTGACTCAGAAGAACTGGCGGTTTCACAAAAGATG GCCAGCAGCTACATTTCAGAGATGTCTGTGACCCCAAACAGCTCTGTGGG AGAAGTGGGCAGCATGGGAGGGTGCATAATGGCTACATCCCACACAGATG ATGTGCGATGGGGTGGGGCATTTGATGAGGCCTGCTTTCATGAGGATGTG CCACTCTCTTCGAGTCAGTCCTGATGTTTCATGTGTCACTTTTGCTTGTG AGTGCTTGTAGAGGATTCTACAGTAGCACCAACCCCAAGTACTTAAAAAG TACAGTAGTTCTGGGTGATTAGGGTGCGAATCTATTCTTGCCATCCTGTT CAGCTGTATAAAGTCCTTAAATGAGGGGCTTGCTCAAGAGGATATGAGCG ACTGGGAGGTGGTGGACGCTTGTGCAGCAATCATCCCCCTCCAGCCCTGC CTGTCCTGCATTGTAGTTACCCCAGAGCACATTGAAGTGCTGTTGGACGG AGTGGACATGACCCACAGTTGTCTTCTTGTTTTGCCCACAGAACTCTTGT TTAGAAGTTGATAGTTACCCTGTCAGTGATACATGTGATAAATTGGTGCT TCCCTCTTATCGTTTTCACTCTCAGCTTCCTTGTTTTTTGTCGTTCGTGT GTGCTTTTGTGTGTGTTTTTTTGTGGCCGTGAACTCCATTGGTTTCTTCA GGGAAATCACCCCCATACTGAAGGTAGCAAAATTCCTCTTCTTTTGCTTG GCAACTTGAATCAACAAGGTTTAATTCATAAGTGAGAGCTGAGCAAAGAG AGTAGAGGTAAAAATGTACCGGTGTATCAGTGTGATAGATATCAATAGTA TTGATATTCCTGACAATATCAGCATTATACCAAGGGCGAAAACTAAATAT ATATACAGTGTGTCCTCC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig950:3779..14496+

>mRNA_D-mesarthrocarpus_Contig950.3.2 ID=mRNA_D-mesarthrocarpus_Contig950.3.2|Name=mRNA_D-mesarthrocarpus_Contig950.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2511bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig950:3779..14496+ (Discosporangium mesarthrocarpum MT17_79)
ATGCCAGCCTCCGTTCAGACAGCGGCGTCACTGGAGGCCGATCTTGACAT
CCGCCCTGTGGTGAAGTTCCTCCAAAATGCCCTCAACATGAAATTGAAGG
GAGACGCTCTCCACTATCAGCACCTTGTGGATCAACTGCTGTCGCGAGAC
GATCCCGAGACGCTTTGGCGCCTCTACGTGGGACTCTCTCTTTGTGTCAC
TACCATATCTCAGAGTCCGGAGGAGTTCGACAAACTGATCGATGCAGTCT
TCCGCTTTAACTGGACGGGGTCACAGCAAATCATTGAGGCATTTTCCGGT
CTGTTGATCAGCCTCATCTCTGCCAATGGGACGTACATCGTTCCCGCTAT
GCATCAACTCATGCGGAACCTGGTTGGCACAGTCAGGGATCTTGACGAGA
ATGGCAAGGTGTCCAGAGAAGGCAAGCTACGACAAGAGCACATCCATCGG
GTCCTGGAAGCCAGTCTTTCTCTTGTCCCCAGTGGCTGCTCCAAGCTCTT
CAGCATCATTAGTGCTAGGTACCCTTTCCGCAGGGTGTCTGCAGAGCTCT
TGGCCAACTATGCACACCAGGCTCTAAGAATAATAAAGTATGCACCCCTC
CTGGAGGAAAAAGTGGTGAGACTCATCATAGAAAGAAGTCTGGAGATAGA
TGTTGAGATCAAGATCATGGACTCAGGGGATGCTGTGGTTGATGAAGATG
AGGGTGCTCTGTTTGCCATTGATGACCTCACTCATGGAAAGCCAAAGATG
AACTCCATGAACGAGCAGGTGGATGAAATGGCGGAGAGGCTGGATGGCGT
GATGGTTGTTCTGTTCGGGTACCTTGACCACCGTCTTGCGGGAGAGGCTC
AGGCGTGGTTTAGCCGGGCAGGCTACCAGCCCAATGACATGCCAGCTGGT
TCGGAGAATGCTGAGGAAGGGAAAAGGGAGGGGGAGGGGGCAGGGGGAGT
CGAGGGGCACCAAGGGGTCAGGCAGAGGGTTGAAACTGTCGGAAAAGTGG
GCAGCAGTTCCCTGCTGGTAGTGTTTGGGGATGTGGTGCTGCCCACACAC
AGGAGTAAATTTGTCCAGTTTGTTGTCTTCTTTATCTGTGCTCGTGCCAG
CTGGATGTCTTCTGCTCTCTGTTCAAAGTTGTTGGACACCCTGCATGAGC
CCTCTACTCCCAAGCTCATACAGCAGAGCTCTGTAGCATACCTGGCTAGC
TACCTGGCACGAGCTTCTTTTGTCAAGGGGGAAGCTCTGTCCAGGCCTCT
GAGTGGCTTGTTAGAATGGGCCCAGGCCTACCTTGAGGAGCATGAGGGTG
CTGATGTTGCTGGGGTGGGTAATATCGGTCTTGAGGGGACACCTGGTCGA
GGAGAGGCTCAGACACCACTCCCCTTTGACCCCAAACCTAGCCGCCCCGG
GTCATGGCACAATGCAAGGGCAAGATCAAGGACAAGGGGGGTGACAAGGG
GGGTGATGAGTGTCACACGTTCTGCCAGTGCCTCCAAGGTGCTGCCACAC
CCCCAGTCTTTCACGTCTCCTGGGTCTGCATGCTCAGCATGGAGGGTGGG
GGGGGGGGAGGAGCACAGACTGTTCTACTCTGTCTGCCAGGCTTCCTTTT
ACATCATGTGCTTCAGGGGTGAGGAACTGGCGAAGTTAGGGGCAATCAAG
GAACAGGCAGCAGCGTGGGGACGGGTGCTGAGTTCTCCGTTGAACCCATT
AAGGTACTGCCTCGATACTGTCAGGAAAGAGTTTGCACGCCTCTGCTGTC
ACTACTTCAGTGAAAACCTTCAACCCAGCCTTCTAGACCACCTGTGGGAG
GTTACTGAGGAGGGTCGCCATGGCAAGGGGGCTCAAATTTTGGTTGGCTC
GAGTCTTGCACCATCCGCATTACTGGGGTCAATAACCCCCCTCAAGCCTC
CCACAAAAGCTGGAGGCCTTGGCTGTGGGTCAAACCCCTTGGATTCATTC
TTCCCATTTGACCCATACCTGCTGAGGCGCTCACATGTCTACATTGGCAG
CACATACAACATGTGGAAGGCACACAAGGACAATATTCCCCCTGCAGAGG
AGATGAGAAGGTCTCCGAGCAAGAGGCGATCGAGACCCTTGGGGTTAGGG
TTAGGGTTAGAATCTAATTCTTCATCAGGTTCCGACACTGATGACTCGTC
CTCTAGCTCCAGTGACCTGGAAGGTGCACAGAGTGGGGAGGAGCAACATG
GTCTGAGTCAAATGGATGATCAGTCCTTCAGCATGCGCCAGACGGCAGCA
GGGCTGCTGTCACGAGCAAGGCTTGGCCACAGGTTTGGGAGTATAGGGGA
TGGTGACTCAGAAGAACTGGCGGTTTCACAAAAGATGGCCAGCAGCTACA
TTTCAGAGATGTCTGTGACCCCAAACAGCTCTGTGGGAGAAGTGGGCAGC
ATGGGAGGGTGCATAATGGCTACATCCCACACAGATGATGTGCGATGGGG
TGGGGCATTTGATGAGGCCTGCTTTCATGAGGATGTGCCACTCTCTTCGA
GTCAGTCCTGA
back to top