mRNA_D-mesarthrocarpus_Contig95.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: D7FW72_ECTSI (Arginine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW72_ECTSI) HSP 1 Score: 384 bits (987), Expect = 7.890e-119 Identity = 183/233 (78.54%), Postives = 206/233 (88.41%), Query Frame = 1
Query: 1 QDGPAPPKVKKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQA 699
++GPAPP+VKK V VDFSSPNIAKEMHVGHLRSTI+G+ +C+VLEFCGH V R NHVGDWGTQFGMLINY+KEAYPNFL++PPNITDLT FYKAAK RFDES+EFK+ SR TVVDLQSGDPAC+EVW LLCDISR+EFQKVYDRL V L E GESFYN+ IP+TI+ L A L + DDGA +V +EHFTYPLIVRKRDGG+GYDSTDMTAI+YRL+TLKCD II ITDAGQA
Sbjct: 432 KNGPAPPEVKKMRVVVDFSSPNIAKEMHVGHLRSTIIGEAICRVLEFCGHTVFRHNHVGDWGTQFGMLINYMKEAYPNFLTDPPNITDLTTFYKAAKLRFDESEEFKEASRNTVVDLQSGDPACKEVWTLLCDISRKEFQKVYDRLDVTLEEHGESFYNDMIPSTIDMLAEAGLVSRDDGADIVRLEHFTYPLIVRKRDGGFGYDSTDMTAIRYRLKTLKCDWIIGITDAGQA 664
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A7S4D6I8_HETAK (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6I8_HETAK) HSP 1 Score: 328 bits (840), Expect = 8.580e-105 Identity = 151/230 (65.65%), Postives = 187/230 (81.30%), Query Frame = 1
Query: 7 GPAPPKVKKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQ 696
GPAPP+ KK+ VAVDFSSPNIAK+MHVGHLRSTI+GDTVC+ LE+ GHEV R+NHVGDWGTQFGMLI Y+KE +P+FL++PPNI DLT FYK A+A+F+ + FK +S+ VV LQSGD +CR +W LLCDISR EF+KVYDRLGV L E GESFYN IPA +E+L++ L D GA ++ ++ + +PLIVRK DGGYGYDSTDMTA+KYR++ L CD + Y+TD GQ
Sbjct: 28 GPAPPRQKKRKVAVDFSSPNIAKDMHVGHLRSTIIGDTVCRTLEYVGHEVLRVNHVGDWGTQFGMLIQYIKEEFPDFLTDPPNIQDLTVFYKGARAKFEADEAFKKQSQLNVVALQSGDESCRRIWQLLCDISRAEFKKVYDRLGVQLEEVGESFYNPMIPACLEELDQLGLTQEDKGAKIIFLDGWKFPLIVRKSDGGYGYDSTDMTAVKYRIQELGCDWVCYVTDFGQ 257
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A7S2XZ92_9STRA (Arginine--tRNA ligase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ92_9STRA) HSP 1 Score: 331 bits (848), Expect = 1.240e-103 Identity = 156/227 (68.72%), Postives = 182/227 (80.18%), Query Frame = 1
Query: 46 VDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQARL*RHIVDA 726
VDFSSPNIAKEMHVGHLRSTI+GDT+C+ LEFCGHEV R NHVGDWGTQFGMLI YLKE YP+FL++PPNITDLT FYKAAK RFDES EFK ++ VV LQSGD CR++W LLC+ISR EF+KVY RL V L ECGESFYN IP IE+LE L D+GA V+ ++HF +PLIVRK DGGYGYDSTDM A++YRL+ L C ++Y+TDAGQA ++ DA
Sbjct: 1 VDFSSPNIAKEMHVGHLRSTIIGDTLCRTLEFCGHEVTRANHVGDWGTQFGMLIQYLKEEYPDFLTQPPNITDLTSFYKAAKMRFDESPEFKKIAQLNVVKLQSGDEQCRKIWHLLCEISRVEFEKVYSRLQVKLVECGESFYNPMIPGVIEELESKQLVKEDNGAKVIFLDHFKFPLIVRKSDGGYGYDSTDMAAVQYRLKQLGCSWVVYVTDAGQAEHFYNVFDA 227
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A835ZA36_9STRA (Arginine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA36_9STRA) HSP 1 Score: 343 bits (880), Expect = 2.170e-102 Identity = 166/243 (68.31%), Postives = 195/243 (80.25%), Query Frame = 1
Query: 1 QDGPAPPKV---KKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLAT--------MDDGATVVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQ 696
+DGPAPP + +K +AVDFSSPNIAKEMHVGHLRSTI+GDT+C++LEF GH V R+NHVGDWGTQFGMLIN++K AYP+FL+ PPN+TDLT FYK AK FDES+EFKD SR+TVV LQSGD C +VW LLC+ISR EFQKVYDRLGV L ECGESFYN+ IP T++ +E L ++ GATV M++ FTYPLIVRK DGGYGYDSTDMTA+ YRL TL CD +IY+TDAGQ
Sbjct: 417 RDGPAPPPLPANRKLKIAVDFSSPNIAKEMHVGHLRSTIIGDTICRILEFAGHAVLRVNHVGDWGTQFGMLINHMKTAYPDFLTHPPNLTDLTTFYKGAKQAFDESEEFKDVSRKTVVKLQSGDAECLQVWKLLCEISRGEFQKVYDRLGVRLEECGESFYNKMIPGTLDKMEAKGLLXXXXXXXXXVEGGATVCMLDGFTYPLIVRKSDGGYGYDSTDMTAVDYRLNTLGCDWVIYVTDAGQ 659
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A7S2SFN5_9STRA (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFN5_9STRA) HSP 1 Score: 328 bits (840), Expect = 4.290e-98 Identity = 156/235 (66.38%), Postives = 189/235 (80.43%), Query Frame = 1
Query: 1 QDGPAPPKVKKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERAD-LATMDDGATVVMME-HFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQA 699
+ GP PP KK+ V VDFSSPNIAKEMHVGHLRSTI+GDT+C++LE+ GHEVHR+NHVGDWGTQFGMLI Y+KEAYP+FL+ PPNI+DLT FYK AK RFDE +FK+++R TVVDLQ+GDP+CR VW LLCDISR+EF KVY RLGV + E GESFYN +IP I+ L+ D L + GA + +E ++YPL ++K DGG+GYDSTDM AI YRL LK D +IY+TDAGQA
Sbjct: 525 EKGPCPPAAKKRRVCVDFSSPNIAKEMHVGHLRSTIIGDTICRMLEYVGHEVHRINHVGDWGTQFGMLILYMKEAYPDFLNSPPNISDLTTFYKQAKKRFDEDQQFKEQARLTVVDLQAGDPSCRAVWQLLCDISRKEFDKVYARLGVQVKEFGESFYNSRIPGVIDVLQGVDGLVKQEGGAKCIFLEPRWSYPLFLQKSDGGFGYDSTDMAAIDYRLRELKGDWLIYVTDAGQA 759
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A7S3ZX63_9STRA (Arginine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX63_9STRA) HSP 1 Score: 325 bits (834), Expect = 7.340e-97 Identity = 157/238 (65.97%), Postives = 190/238 (79.83%), Query Frame = 1
Query: 1 QDGPAPPK-VK----KQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQA 699
Q G APP +K K+ V VDFSSPNIAKEMHVGHLRSTI+GDT+C+VLE+CGH+VHR+NHVGDWGTQFGMLI++++EAYP+F S PPNITDLT FYK AK RFD+ + FK +SR+TVV LQ+GDP CRE+W LLCDISR+EF +VY RLGV L E GES YN IP I LE+A L T DGAT V +E ++PLIV+K DGG+GYDSTD+ AI +RL+TL D ++Y+TD GQA
Sbjct: 389 QKGKAPPPPIKAFGGKRKVLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEYCGHDVHRINHVGDWGTQFGMLISHMEEAYPDFTSNPPNITDLTVFYKNAKKRFDDDEAFKKKSRETVVALQAGDPRCREIWALLCDISRKEFARVYKRLGVTLEEVGESHYNSMIPNAISLLEKAGLTTDSDGATTVFLEGHSFPLIVKKSDGGFGYDSTDIAAIHHRLKTLGVDWVVYVTDLGQA 626
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: W7TZ28_9STRA (Arginine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ28_9STRA) HSP 1 Score: 318 bits (815), Expect = 1.700e-94 Identity = 160/242 (66.12%), Postives = 188/242 (77.69%), Query Frame = 1
Query: 7 GPAPPKVKKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMM--EHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQARL*RHIVDA 726
GP +K V VDFSSPNIAKEMHVGHLRSTI+GD++C++LEF GH+V R+NHVGDWGTQFGMLI YLKE YPNF+ +PPNITDLT FYKAAKARFDES FK+R+R VV+LQ+GDP R +W LLCDISR EFQKVYDRL V L E GESFYN++IPA IE+L+ +L D GA ++ +H PL+VRK DGGYGYDSTD+ AI+YRL+ L D +IYITDAGQA I DA
Sbjct: 350 GPQAAMARKLRVLVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEFLGHDVARVNHVGDWGTQFGMLIKYLKEEYPNFMQDPPNITDLTGFYKAAKARFDESPAFKERARVGVVELQAGDPESRAIWKLLCDISRAEFQKVYDRLDVRLEEYGESFYNDRIPAVIEELKAENLLEEDGGAMIMWCGGKH-QIPLMVRKSDGGYGYDSTDLAAIRYRLKDLSRDWVIYITDAGQATHFHMIFDA 590
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A7S1GPQ4_CYCTE (Arginine--tRNA ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPQ4_CYCTE) HSP 1 Score: 307 bits (786), Expect = 1.190e-93 Identity = 146/232 (62.93%), Postives = 180/232 (77.59%), Query Frame = 1
Query: 10 PAPPKVKKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGAT--VVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQA 699
P P + T VDFSSPNIAKEMHVGHLRSTI+G++VC+VLEF GH VHR+NHVGDWGTQFGMLI YLKE +PNF ++ PNITDLT+FYK AK RFDES EFK ++ VV LQSGD C ++W +LCD+SR+EFQKVYDRL + + ECGESFYN +IPA I++ E+A L ++++G V + + F PL+++K DGGYGYDSTDM A+KYRL TLK II ITD Q+
Sbjct: 33 PKPTSITPSTCVVDFSSPNIAKEMHVGHLRSTIIGESVCRVLEFVGHNVHRVNHVGDWGTQFGMLIQYLKEEFPNFANDVPNITDLTQFYKNAKQRFDESPEFKKVAQLNVVKLQSGDEECLKIWNILCDVSRKEFQKVYDRLSITVEECGESFYNSRIPAVIQEFEKAGLISVEEGGAKCVFVGDPFKIPLMLQKSDGGYGYDSTDMAALKYRLHTLKAQRIIVITDFSQS 264
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: F0XWA2_AURAN (Arginine--tRNA ligase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWA2_AURAN) HSP 1 Score: 306 bits (784), Expect = 2.120e-92 Identity = 144/220 (65.45%), Postives = 173/220 (78.64%), Query Frame = 1
Query: 40 VAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMMEHFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQA 699
V VDFSSPNIAKEMHVGHLRSTI+GDT+C+VLEFCGH+V R+NHVGDWGTQFGMLI +++EAYP+FL PPNITDLT FYK AK RFDE ++FK+ SR+TVV LQ+GD CR +W +LCDISR+EF KVY RL V + E GES+YN IP I LE A L + GA V + ++PLI+RK DGGYGYDSTDM AI +RL TL + ++Y+TD GQA
Sbjct: 121 VLVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFCGHDVRRVNHVGDWGTQFGMLITHMEEAYPDFLQNPPNITDLTTFYKNAKKRFDEDEQFKEVSRKTVVALQAGDARCRAIWSVLCDISRKEFDKVYARLDVKVEEFGESYYNAMIPGAIGLLEDAGLVNAESGAACVFLPGHSFPLIIRKSDGGYGYDSTDMAAIHHRLRTLGVEWVVYVTDLGQA 340
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Match: A0A7R9YDX2_9STRA (Arginine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDX2_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.110e-90 Identity = 147/234 (62.82%), Postives = 175/234 (74.79%), Query Frame = 1
Query: 4 DGPAPPKVKKQTVAVDFSSPNIAKEMHVGHLRSTILGDTVCKVLEFCGHEVHRLNHVGDWGTQFGMLINYLKEAYPNFLSEPPNITDLTKFYKAAKARFDESDEFKDRSRQTVVDLQSGDPACREVWLLLCDISRREFQKVYDRLGVHLSECGESFYNEQIPATIEDLERADLATMDDGATVVMME-HFTYPLIVRKRDGGYGYDSTDMTAIKYRLETLKCDTIIYITDAGQAR 702
+GP PP+V+KQ + VDFSSPNIAKEMHVGHLRSTI+GDT+C++LEFCGHEV R NHVGDWGTQFGMLI ++ E YP+ + PPNITDLT Y+AAK +F E D+FK +R+ VV LQSGD C VW LL DISR EF KVY RL VHL E GESFYN IP +E+L+++ A +GA + + PLIV K DGGYGYDSTDM A+ YRL L CD IY+TDAGQA+
Sbjct: 169 EGPIPPRVEKQRILVDFSSPNIAKEMHVGHLRSTIIGDTICRLLEFCGHEVLRTNHVGDWGTQFGMLIKHIFEEYPDLETNPPNITDLTSLYQAAKKKFKEDDDFKTAAREHVVLLQSGDERCHRVWDLLRDISRMEFNKVYTRLDVHLEEYGESFYNPMIPGVVEELQKSGTAEDFEGAVCIFQRPKYEIPLIVVKSDGGYGYDSTDMAALSYRLRDLLCDRCIYVTDAGQAQ 402 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig95.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig95.6.1 >prot_D-mesarthrocarpus_Contig95.6.1 ID=prot_D-mesarthrocarpus_Contig95.6.1|Name=mRNA_D-mesarthrocarpus_Contig95.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=244bp MCFDAARACGWVSKDHRLEHIGFGVVLGEDGKKFKTRSGETVRLVDLLDEback to top mRNA from alignment at D-mesarthrocarpus_Contig95:48014..53060- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig95.6.1 ID=mRNA_D-mesarthrocarpus_Contig95.6.1|Name=mRNA_D-mesarthrocarpus_Contig95.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5047bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig95:48014..53060- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig95:48014..53060- >mRNA_D-mesarthrocarpus_Contig95.6.1 ID=mRNA_D-mesarthrocarpus_Contig95.6.1|Name=mRNA_D-mesarthrocarpus_Contig95.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=732bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig95:48014..53060- (Discosporangium mesarthrocarpum MT17_79)back to top |