mRNA_D-mesarthrocarpus_Contig9499.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9499.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9499.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A835YQB5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB5_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.430e-70
Identity = 112/130 (86.15%), Postives = 118/130 (90.77%), Query Frame = 1
Query:   61 RMASLTSRQSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            R  +L +  +LPWVEKYRP+SLDELVAHEDIV IL  LIESNKLPHLLFYGPPGTGKTSTILACARKLYG TF +MTLELNASDDRGIDVVR QIKEFAG KRLFS+GVKLVILDEADAMTSDAQFALRR
Sbjct:   19 RALALAASSTLPWVEKYRPSSLDELVAHEDIVSILTTLIESNKLPHLLFYGPPGTGKTSTILACARKLYGPTFSSMTLELNASDDRGIDVVRDQIKEFAGTKRLFSSGVKLVILDEADAMTSDAQFALRR 148          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: D8LMR9_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR9_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.220e-69
Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 1
Query:   76 TSRQSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            T+RQ+LPWVEKYRP+SL+ELVAHEDIVGIL KLI SNKLPHLLFYGPPGTGKTSTILACA+KLYG  F+ M LELNASDDRGIDVVRGQIKEFAG KRLFS+GVKLVILDEADAMT+DAQFALRR
Sbjct:   58 TARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRR 182          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A7S3UU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU54_HETAK)

HSP 1 Score: 209 bits (533), Expect = 1.130e-64
Identity = 99/118 (83.90%), Postives = 112/118 (94.92%), Query Frame = 1
Query:   97 WVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            WVEKYRP +LD+LVAHEDIVG+LNKLI+SN+LPHLLFYGPPGTGKTSTILACAR+LYG +F +M LELNASDDRGIDVVR Q+KEFAG +RLFS+GVKLV+LDEADAMT+DAQFALRR
Sbjct:   22 WVEKYRPATLDDLVAHEDIVGVLNKLIDSNRLPHLLFYGPPGTGKTSTILACARRLYGKSFASMVLELNASDDRGIDVVRNQVKEFAGTRRLFSSGVKLVVLDEADAMTADAQFALRR 139          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A7S2XZS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZS5_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.190e-61
Identity = 97/121 (80.17%), Postives = 110/121 (90.91%), Query Frame = 1
Query:   88 SLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            SLPWVEKYRP +LD+LV+ E I+ ILNKLI+SN+LPHLLFYGPPGTGKTSTILACAR++YG  F +MTLE+NASDDRGIDVVR QIK FA  +RLFS+G+KLVILDEADAMTSDAQFALRR
Sbjct:   13 SLPWVEKYRPETLDDLVSQEAIISILNKLIDSNRLPHLLFYGPPGTGKTSTILACARRIYGKNFSSMTLEMNASDDRGIDVVREQIKNFASTRRLFSSGMKLVILDEADAMTSDAQFALRR 133          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: W7TD12_9STRA (Replication factor c subunit 5 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD12_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.380e-61
Identity = 96/122 (78.69%), Postives = 110/122 (90.16%), Query Frame = 1
Query:   88 SLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTT-FQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            S+PWVEKYRPTSL +LVAHE+I+ IL +LIE N+LPHLLFYGPPGTGKTSTILACA+++YG + + AMTLELNASD+RGIDVVR QIKEFA  KRLFS GVKLVILDEAD +T+DAQFALRR
Sbjct:   38 SMPWVEKYRPTSLQDLVAHEEIISILTRLIEKNQLPHLLFYGPPGTGKTSTILACAKQMYGASKYGAMTLELNASDERGIDVVRQQIKEFAATKRLFSNGVKLVILDEADHLTNDAQFALRR 159          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A6A5AN42_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AN42_9STRA)

HSP 1 Score: 194 bits (493), Expect = 4.480e-61
Identity = 91/122 (74.59%), Postives = 108/122 (88.52%), Query Frame = 1
Query:   85 QSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            ++ PWVEKYRP+SLD+L+AH DI+  LN+LI++ KLPHLLFYGPPGTGKTS ILA AR+LYG  + +M LELNASDDRGI VVR QIKEFAG K+LFS+G+KL+ILDEADAMT+DAQFALRR
Sbjct:   21 ENWPWVEKYRPSSLDDLIAHADIISTLNRLIDAQKLPHLLFYGPPGTGKTSMILAAARRLYGNNYASMVLELNASDDRGISVVRDQIKEFAGTKKLFSSGIKLIILDEADAMTNDAQFALRR 142          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A3R7EJH0_9STRA (AAA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EJH0_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.620e-60
Identity = 91/122 (74.59%), Postives = 108/122 (88.52%), Query Frame = 1
Query:   85 QSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            ++ PWVEKYRP+SLD+L+AH DI+  LN+LI++ KLPHLLFYGPPGTGKTS ILA AR+LYG  + +M LELNASDDRGI VVR QIKEFAG K+LFS+G+KL+ILDEADAMT+DAQFALRR
Sbjct:   21 ENWPWVEKYRPSSLDDLIAHADIISTLNRLIDAQKLPHLLFYGPPGTGKTSMILAAARRLYGNNYASMVLELNASDDRGISVVRDQIKEFAGTKKLFSSGIKLIILDEADAMTNDAQFALRR 142          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A7S0P9I7_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0P9I7_CAFRO)

HSP 1 Score: 192 bits (489), Expect = 8.710e-60
Identity = 94/125 (75.20%), Postives = 111/125 (88.80%), Query Frame = 1
Query:   79 SRQSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTT-FQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            S  +LPWVEKYRP ++D+L+AH+DI+G +N+LI++ KLPHLLFYGPPGTGKTSTILACA++LYG   +++MTL LNASDDRGI VVR QIK FAG K+LFS GVKLVILDEADAMTSDAQFALRR
Sbjct:   18 SPDTLPWVEKYRPATMDDLIAHKDILGTINRLIDNGKLPHLLFYGPPGTGKTSTILACAKRLYGEKGWKSMTLVLNASDDRGIGVVRDQIKGFAGTKKLFSTGVKLVILDEADAMTSDAQFALRR 142          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A067CLZ0_SAPPC (AAA domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CLZ0_SAPPC)

HSP 1 Score: 196 bits (497), Expect = 2.690e-59
Identity = 93/124 (75.00%), Postives = 110/124 (88.71%), Query Frame = 1
Query:   79 SRQSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            S +S PWVEKYRP+SL++L+AH DIV  LN+LI+S K+PHLLFYGPPGTGKTS +LA AR+LYG  +Q+M LELNASDDRGI+VVR QIKEFAG K+LFS G+KL+ILDEADAMT+DAQFALRR
Sbjct:   18 STESWPWVEKYRPSSLNDLIAHADIVATLNRLIDSQKMPHLLFYGPPGTGKTSMMLAAARRLYGNNYQSMVLELNASDDRGINVVRDQIKEFAGTKKLFSDGIKLIILDEADAMTNDAQFALRR 141          
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Match: A0A485KIW1_9STRA (Aste57867_7874 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIW1_9STRA)

HSP 1 Score: 195 bits (496), Expect = 4.130e-59
Identity = 93/124 (75.00%), Postives = 109/124 (87.90%), Query Frame = 1
Query:   79 SRQSLPWVEKYRPTSLDELVAHEDIVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLELNASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR 450
            S  + PWVEKYRP+SLD+L+AH DIV  LN+LI++ KLPHLLFYGPPGTGKTS ILA AR+LYG  + +M LELNASDDRGI+VVR QIKEFAG K+LFS+G+KL+ILDEADAMT+DAQFALRR
Sbjct:   19 STDNWPWVEKYRPSSLDDLIAHTDIVSTLNRLIDAQKLPHLLFYGPPGTGKTSMILAAARRLYGNNYASMVLELNASDDRGINVVRDQIKEFAGTKKLFSSGIKLIILDEADAMTNDAQFALRR 142          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9499.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQB5_9STRA4.430e-7086.15P-loop containing nucleoside triphosphate hydrolas... [more]
D8LMR9_ECTSI1.220e-6988.00AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3UU54_HETAK1.130e-6483.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZS5_9STRA1.190e-6180.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TD12_9STRA3.380e-6178.69Replication factor c subunit 5 (Fragment) n=1 Tax=... [more]
A0A6A5AN42_9STRA4.480e-6174.59AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A3R7EJH0_9STRA1.620e-6074.59AAA domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A7S0P9I7_CAFRO8.710e-6075.20Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A067CLZ0_SAPPC2.690e-5975.00AAA domain-containing protein n=4 Tax=Saprolegniac... [more]
A0A485KIW1_9STRA4.130e-5975.00Aste57867_7874 protein n=1 Tax=Aphanomyces stellat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9499contigD-mesarthrocarpus_Contig9499:13..2757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LMR9
Preferred nameRFC5
PFAMsAAA,Rep_fac_C
Model size450
Max annot lvl2759|Eukaryota
KEGG koko:K10756
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005663,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0022402,GO:0022616,GO:0030554,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031348,GO:0031389,GO:0031390,GO:0031391,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034641,GO:0034644,GO:0034645,GO:0035639,GO:0036094,GO:0042623,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061860,GO:0065007,GO:0065009,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0090329,GO:0090618,GO:0097159,GO:0097367,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1902296,GO:1902319,GO:1902494,GO:1902969,GO:1902983,GO:1903047,GO:1903460,GO:1904949,GO:2000112,GO:2000278,GO:2000573
Exons3
Evalue2.01e-70
EggNOG OGsCOG0470@1|root,KOG0990@2759|Eukaryota
DescriptionDNA replication
Cds size450
COG categoryL
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791103.6389623-CDS-D-mesarthrocarpus_Contig9499:12..1651680791103.6389623-CDS-D-mesarthrocarpus_Contig9499:12..165Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9499 13..165 -
1680791103.6536841-CDS-D-mesarthrocarpus_Contig9499:1133..12671680791103.6536841-CDS-D-mesarthrocarpus_Contig9499:1133..1267Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9499 1134..1267 -
1680791103.664073-CDS-D-mesarthrocarpus_Contig9499:2594..27571680791103.664073-CDS-D-mesarthrocarpus_Contig9499:2594..2757Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9499 2595..2757 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9499.1.1prot_D-mesarthrocarpus_Contig9499.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9499 13..2757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9499.1.1

>prot_D-mesarthrocarpus_Contig9499.1.1 ID=prot_D-mesarthrocarpus_Contig9499.1.1|Name=mRNA_D-mesarthrocarpus_Contig9499.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=150bp
SKGKGKGKAKKVGGEDTDLERMASLTSRQSLPWVEKYRPTSLDELVAHED
IVGILNKLIESNKLPHLLFYGPPGTGKTSTILACARKLYGTTFQAMTLEL
NASDDRGIDVVRGQIKEFAGPKRLFSAGVKLVILDEADAMTSDAQFALRR
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9499:13..2757-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9499.1.1 ID=mRNA_D-mesarthrocarpus_Contig9499.1.1|Name=mRNA_D-mesarthrocarpus_Contig9499.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2745bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9499:13..2757- (Discosporangium mesarthrocarpum MT17_79)
TCAAAGGGGAAGGGCAAGGGCAAGGCGAAGAAGGTCGGCGGTGAAGACAC AGATCTCGAGCGAATGGCCAGCCTGACCTCCCGGCAGTCTCTTCCCTGGG TCGAAAAGTACCGCCCAACATCTCTTGACGAGCTTGTGGCTCACGAAGAT ATCGTCGGCATTTGTGAGTGACCCCTGCGTGCAATTTTTTTTTCCGTGTG AGTTGTTTCATCAGGGACTTTCGTTGTTTTACTGAAGCATGGCCTGTTTT TGGCGTGGCTTGCTTGTTGAACGCAGATGACTTGATATGAGTGGGGCCTT CACGGATCCCTTTAGAACCTGGTCCATCCCCATCCCCTGCCCACACCCTT CACAACCGTGCTTGTTAGATCCCCTCACGACTCACAACACGTGCAGTTGC ATCTGGTGTGTGTATGTGTGTGTGTGTTTGTGTGTACTATTTTTGTTCAC CCACTGCACGCACAAGGTGTCAGGTTAGGGTTACGGTTAGGGTTACGGTT ACGGTCAGGGTTGTGTACTGGGCGATTGCTCCCCCCTCCAATGGAAACCC AGCATCAAGACAGATGTCGATCCGCTAAGTGGGAACCCTTTGGCTGTGTG ATTGCGCTATGCCCTGCAGTAGGAGCACAGTAAATGCCTGGCACCTTGAA TGTTACTGTCCCAGGTGAAGGCAAACATCGGTCTTGTCACCCACCAGGGC TGGCTCTTCCCAGTAGAGCAAAACGAAACTGATCGTAAGCATTAAAAATG TCACCGATTCCAGATGGGAAGAAGAAGAGAAAGGGAACAGAGTTACAGAG CTCTAGGGTTATGGGTTGTGGACCGCAGATTATACTCGAAAGCCAAGCCC CAACCCATCTTCGGATACATGCACCTATCTGCATCACCTGACTACAGTAA CTGAACTGTTTCCTTTCATCCTTTTGGCCTGGTCTGAACCAACTGCAACT GAGCACCTCCCATATCTCTAGCAGAACCCCGCTGCTCTCTCGCTGCCAAT CAAGAAGAGCCAATGATAGTATACAAAGTATGGCAAAGTATGCTGTACTC TGTGACGTACTGCTGCATACTGTACTACACTATACTTCATGCTATGCCTC ACTATACTTCATGCTGTACTACACTACACTTCATGCTATACCTCAATATA CTTCATGCTATACCTCACTATACTTCATGCTATGCCTCACTATACTTCAT ACTGTAATACAATATACTTAATGCTACACTTCGCTATACTTCATACTGTA CTGCACTATGCTTCATACCATACTGCAACATGCTCCATACTATACTCCGT ACTGTGCTCCATACTGTACTGCACTGTATTTCATTTTATACCTCAATATA CTTCATGCTGTGCTACACTGTATTTCATACTATACCTCAATATACTTCAA CGCACTGATGTTTCGCACACTTTATCTGCTGATGGCGGGAAACGCCTGGT GCCATTCCTCACTGGTTCGTTTCAACGACAACGGTGTTAGTGAACAAGCT TATTGAGAGCAACAAGCTGCCCCACCTCCTGTTCTATGGCCCCCCTGGGA CGGGGAAGACATCCACCATACTGGCCTGTGCGAGAAAGCTGTACGGGACG ACGTTTCAGGCCATGACACTTGAGGTGGCTGTTGTTTTTTGTATGTGTTT TGTGTTCTGTGAATTGTGTGTTTCAACATAACATAGCCTTTTTGTGGGTG AACATGGGGTGTCTTCAGTAAACACAGCCTTCTTGTGTGGTCACACACGG CGTGTATGTGCCACACAGTGCATGCGTGCATTGTGGTGTACTTGCATGTT CTATTACGATGCTCGTTCACCTCCCCTGGCAAATGTTCTGGAGCACATCA AAGTCTGTGGGAAATTCAGGTTTTGGGTGGTGTTGATAGGGGCTGGCAGA GAAAGCAAGAGTTTGTTGTGAACCGTCTTGTAGACTCATTCTCATGTGCT TTCTTGTGCATACCTACTGATTTCAAGCCAGTTGCACACACACATATGTG TAGACATGTGTACCTCTATTCCCTTGTGGGTATCTTTATCATCAGAGCGT TTGCGGCCAAAGTTTATCTGCGCAGTATTCTCTTGAGTGCTATGCTCCGA AGTCTACTGAGAGCTCTGCCTGCACACTGCAGTCTACAGTAGGCATGTTT ATATGTGTGTGTTGTGTTTGTCTCTTCTGGTGTAGGAGAGTCTTTCTCCA CAGTTGCTTTGTTTTGTTTATATGAGTTTTTCTCTTCCTTGGTTTTTACT CACCCTGTGACCAAGGGTTTGAGACAGTCAAGCTAGTTTGTGATGATAAC AATACTAATACTAAGTTGCTTGCTATGGCGAGGAAATGGCTGCGATTGCT TCCCCCCCGACCCCCACCCCTCCACCACCCCTGCCCTCCCCTGCTCTAAT GACCATGTACCAAGCCACACACACACCACACCACCTAGCCGTTTTTTTTC TTTTCACCTGACCCATACCCTAACCCCGACACCGACCCCAACCCCAACCC GAACCCCATGATAACCCTGTGTGACCCCAAACCCCAACTCCCCCCCCTCA ACCCTGCCCTTGAATGCCGTCATTGCTGCCTGCCATCCTCAGCTCAATGC GTCAGATGATCGAGGCATCGATGTGGTGAGGGGGCAGATCAAGGAGTTCG CGGGCCCAAAGCGGCTCTTCAGCGCTGGGGTGAAGCTGGTCATTCTCGAT GAGGCTGATGCCATGACCAGTGACGCTCAGTTCGCCCTGCGACGA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9499:13..2757-

>mRNA_D-mesarthrocarpus_Contig9499.1.1 ID=mRNA_D-mesarthrocarpus_Contig9499.1.1|Name=mRNA_D-mesarthrocarpus_Contig9499.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=450bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9499:13..2757- (Discosporangium mesarthrocarpum MT17_79)
TCAAAGGGGAAGGGCAAGGGCAAGGCGAAGAAGGTCGGCGGTGAAGACAC
AGATCTCGAGCGAATGGCCAGCCTGACCTCCCGGCAGTCTCTTCCCTGGG
TCGAAAAGTACCGCCCAACATCTCTTGACGAGCTTGTGGCTCACGAAGAT
ATCGTCGGCATTTTGAACAAGCTTATTGAGAGCAACAAGCTGCCCCACCT
CCTGTTCTATGGCCCCCCTGGGACGGGGAAGACATCCACCATACTGGCCT
GTGCGAGAAAGCTGTACGGGACGACGTTTCAGGCCATGACACTTGAGCTC
AATGCGTCAGATGATCGAGGCATCGATGTGGTGAGGGGGCAGATCAAGGA
GTTCGCGGGCCCAAAGCGGCTCTTCAGCGCTGGGGTGAAGCTGGTCATTC
TCGATGAGGCTGATGCCATGACCAGTGACGCTCAGTTCGCCCTGCGACGA
back to top