mRNA_D-mesarthrocarpus_Contig9474.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9474.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9474.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9474.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9474contigD-mesarthrocarpus_Contig9474:1238..2581 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size750
Hectar predicted targeting categorymitochondrion
Exons2
Cds size414
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791101.2741468-UTR-D-mesarthrocarpus_Contig9474:1237..13261680791101.2741468-UTR-D-mesarthrocarpus_Contig9474:1237..1326Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9474 1238..1326 -
1680791101.3044734-UTR-D-mesarthrocarpus_Contig9474:1740..19031680791101.3044734-UTR-D-mesarthrocarpus_Contig9474:1740..1903Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9474 1741..1903 -
1680791101.315175-UTR-D-mesarthrocarpus_Contig9474:2497..25811680791101.315175-UTR-D-mesarthrocarpus_Contig9474:2497..2581Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9474 2498..2581 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791101.2880218-CDS-D-mesarthrocarpus_Contig9474:1326..17401680791101.2880218-CDS-D-mesarthrocarpus_Contig9474:1326..1740Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9474 1327..1740 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9474.1.1prot_D-mesarthrocarpus_Contig9474.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9474 1327..1740 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9474.1.1

>prot_D-mesarthrocarpus_Contig9474.1.1 ID=prot_D-mesarthrocarpus_Contig9474.1.1|Name=mRNA_D-mesarthrocarpus_Contig9474.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=138bp
MMRRNLNAVWSRRCHVALRSTLGCVKPSRDSDGGDKGWRRAGRMNGRAQL
EGHTEHCDWNEGDTPLAELSILQYSTDSSPPPPSGERANTSIECFEPILR
VNASKPNPNPNPSQLWCLNVNASKCLEEHHSETLGRP*
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mRNA from alignment at D-mesarthrocarpus_Contig9474:1238..2581-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9474.1.1 ID=mRNA_D-mesarthrocarpus_Contig9474.1.1|Name=mRNA_D-mesarthrocarpus_Contig9474.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1344bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9474:1238..2581- (Discosporangium mesarthrocarpum MT17_79)
TTACTCCATGGCTGTGGGTTCCCAAGGGGGGTGCTCCCGTTGGGAGGCTT
GTCTCACTTACTGCGCTGGAGGTTGGACAAATGGGTGAGTTTTGGGGTGC
AGAGAGAGCAGGGATGGGGAGGGGGGGGGGGCAAGAGCATGGGCTGCAAG
TGGGTGTTGTGAAGAGGTGGGCGTGTTATTTATTGGTCTGGATTCCCGTG
GGTGCAAGACTCAGAATTTGTGAGCTTCTGAAGTCAAACTTGTTAGACTG
CAACACTTGGGAAAGAATTTTGCGGGGGGGGGGGGGCTACTGCAAGGGGA
CATGACTTCCCCTTGTCTCTTTGGCTCTTGGAAAAGAGTCCGAGGTTCTG
GGTTATGCGGAGGTGGTTCTTTCAGAAAACAGCTCTCCTCTTTTGTTAGA
AAAAGGACAGAGGGCTGTTTTTGAAAGGGCTTCCCTGAAAAAAAAGAATC
TTCGCCGCAGTAGTTGCTCCTCGAGAAGAGGGGAGAAAGGAGGCGTTGCT
TTGCAGCAGCCAATCTTCGGCGGGGCCTCTCTCTCTCTCTCTCTCTCTCT
TCTGGATTATCTCTCTCTCTCTTCTGGATTATCTCTCTCTCTCTTCTGGA
TTATCTCTCTCTCTCTCTTCTGGATTATCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCACGGCACAAACAGACGAGGAGAGAAGTGGCTCCAC
GCTGGTGGGCCCATGCCTGACTGAACGCGAGCTGATTGGTGGAAAGAAAA
ATCTTCGGGCCAAGAATCTTCTTTTTTTTTTTTTACGCGTGCCTTCCGTG
ATGCACGGCATAGATGAATGGCCTTTCATCGCTAGGATGATATGATGCGA
AGAAATTTAAACGCGGTGTGGAGCAGGCGTTGCCACGTTGCTCTCCGTAG
CACTCTGGGCTGCGTGAAGCCGAGCAGGGATTCCGATGGGGGTGATAAGG
GCTGGAGAAGGGCGGGCAGGATGAATGGAAGAGCCCAACTTGAAGGGCAC
ACCGAGCACTGCGATTGGAACGAGGGCGATACACCTCTTGCAGAGCTCTC
TATTCTACAGTACAGTACAGACAGTAGCCCCCCCCCCCCCAGTGGGGAAC
GGGCAAATACTTCAATTGAATGCTTTGAGCCCATCCTTCGAGTAAATGCT
TCAAAACCTAACCCTAACCCTAACCCCTCACAACTTTGGTGCCTAAATGT
AAATGCTTCAAAATGTCTTGAAGAGCACCACTCTGAAACACTTGGAAGAC
CCTAGTAGAGCTTGCATTACCCCTCACAACTTTGGTGCCTCCCCCCCCCT
AACCCTAACCCACCTCCCTGTTCTATCGGGTGTCGATGTGTGCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9474:1238..2581-

>mRNA_D-mesarthrocarpus_Contig9474.1.1 ID=mRNA_D-mesarthrocarpus_Contig9474.1.1|Name=mRNA_D-mesarthrocarpus_Contig9474.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=414bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9474:1238..2581- (Discosporangium mesarthrocarpum MT17_79)
ATGATGCGAAGAAATTTAAACGCGGTGTGGAGCAGGCGTTGCCACGTTGC
TCTCCGTAGCACTCTGGGCTGCGTGAAGCCGAGCAGGGATTCCGATGGGG
GTGATAAGGGCTGGAGAAGGGCGGGCAGGATGAATGGAAGAGCCCAACTT
GAAGGGCACACCGAGCACTGCGATTGGAACGAGGGCGATACACCTCTTGC
AGAGCTCTCTATTCTACAGTACAGTACAGACAGTAGCCCCCCCCCCCCCA
GTGGGGAACGGGCAAATACTTCAATTGAATGCTTTGAGCCCATCCTTCGA
GTAAATGCTTCAAAACCTAACCCTAACCCTAACCCCTCACAACTTTGGTG
CCTAAATGTAAATGCTTCAAAATGTCTTGAAGAGCACCACTCTGAAACAC
TTGGAAGACCCTAG
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