mRNA_D-mesarthrocarpus_Contig9464.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9464.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9464.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: D8LJP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP7_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 7.000e-110
Identity = 204/321 (63.55%), Postives = 241/321 (75.08%), Query Frame = 1
Query:   13 KRARGVAQGPSRMYDDRKARKQADRMEDDGMEQGSGFNIWYGPRKKK-RGMNPASSRCNPSTDAGVTRGSEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPV--GAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSLLDNPRLLGTSDGGGGSRSLGLVDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLHVRWASEDPNPRAVDKALTRHAQSLLASQVATGSIPEDLVGWPLGGADRALLKKCRLDPSNPSPV 966
            KR R   +GPSR YD+R+ARKQA+R EDDG+E+G   NIWYGPRKKK RG + A+SRC+P  DAG TRGSEAGA EFC+FFARG+CA+G+ CHKLH +P+  DDA +DN HDCFGR+R    EDDDRDG GCFLKENRTLWVGG PV   A A E +++NF  WG ++SVR+V++K+CAFVQY+ RASAEFAKEAM NQSLL   +L      G   R              XXXXXXXXXXXXXXXXXXXX AVLHVRWA+EDPNPRAV +A   HAQ+LLA+QVA G++P D+ G  L GADRALL+K  +DP NPS V
Sbjct:    3 KRGRDERRGPSRQYDNRQARKQAERFEDDGLEEGG--NIWYGPRKKKWRGKDKAASRCDPDVDAGATRGSEAGALEFCVFFARGACARGYSCHKLHLVPTPEDDAREDNMHDCFGRERSGV-EDDDRDGAGCFLKENRTLWVGGVPVFDEASARERVRRNFGPWGRISSVRLVKSKSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRRE------KSTGPSRXXXXXXXXXXXXXXXXXXXXGAVLHVRWAAEDPNPRAVIQARAGHAQTLLAAQVAAGALPSDVAGR-LPGADRALLRKAGMDPRNPSQV 313          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A6H5J7E9_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7E9_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.060e-53
Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 1
Query:  133 YGPRKKKRGMNPASSRCNPSTDAGVTRGSEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPV--GAGAAEAIQQNFEVWGHVASVRVVENK 531
            YGPRK+ RG + A SRC+P  DAG TRGSEAGA EFC+FFARG+CA+G+ CHKLHF+P+  DDA +DN HDCFGR+R    ED+DRDG GCFLKENRTLWVGG PV   A A E ++QNF   G ++SVR+V++K
Sbjct:   20 YGPRKRWRGKDKAPSRCDPDVDAGATRGSEAGALEFCVFFARGACARGYSCHKLHFVPTPEDDAREDNMHDCFGRERSGV-EDEDRDGAGCFLKENRTLWVGGVPVFDEASARERVRQNFGPLGRISSVRLVKSK 153          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A067C3P4_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C3P4_SAPPC)

HSP 1 Score: 144 bits (363), Expect = 4.790e-36
Identity = 86/197 (43.65%), Postives = 114/197 (57.87%), Query Frame = 1
Query:   61 RKARKQADRM--EDDGMEQGSGFNIWYGPRKKK-----RGMNPASSRCNPSTDAGVTRGSEAGARE--FCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPVGAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSLLDNPRL 624
            R ARKQ D M  ++  ME G+ +NIWY     +     +G +PA  RC   TD G T+  + G     FC+ FARG CA+G  C+  H LP+ AD+      HDCFGR+R A+D DD   G G F++ +RTL+VGG    +   + + Q FE WG V +V +V     AFV+Y  R SAEFAKEAM NQ+L D+  L
Sbjct:  142 RPARKQIDAMPTKNTRMEGGNEYNIWYDKYVGENWDHTKGQDPAEHRCCLETDGGYTKADKIGKSNKFFCLHFARGGCARGTECNYFHRLPTMADELRLGMLHDCFGRERHATDRDD-MAGAGNFMRNSRTLYVGGLKPKSMVTDIVMQAFEEWGEVENVNIVHRLTTAFVRYRHRTSAEFAKEAMSNQALEDSEIL 337          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A397TFX7_9GLOM (Uncharacterized protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TFX7_9GLOM)

HSP 1 Score: 142 bits (358), Expect = 5.800e-36
Identity = 96/290 (33.10%), Postives = 141/290 (48.62%), Query Frame = 1
Query:  106 EQGSGFNIWY-----GPRKKKRGMNPASSRCNPSTDAGVTRGSEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPVGAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSLLDNPRLLGTSDGGGGSRSLGLVDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLHVRWASEDPNPRAVDKALTRHAQSLLASQVATGSIPEDLVGWPLGGADRALLKKCRLDPSNPS 960
            +QG+ +NIWY     G R  K     A +RCN   DAG T+G +     FC++FARG C  G+ C+  H +P+E+D    D   D FGR +   +  +D  G+G F +ENRTL+VG   +       ++++FE WG +  ++++++K  AFV Y+   SAEFAKEAM NQSL +N                                                  VL+VRWA++DPNPRA  KA  +     LA+Q    S+P +   + L   D  + K+ R+D +N S
Sbjct:   24 QQGTFYNIWYNKWSGGERSSKFTREKAKTRCNVKIDAGETKGDKISNTFFCLYFARGCCPYGYECNYWHRIPTESDPI--DTTIDAFGRDKF-DEYREDMGGIGSFNRENRTLYVGHVTICPDMEGIVRKHFEEWGEIEKIKILKDKGVAFVTYNSSLSAEFAKEAMSNQSLDNNE-------------------------------------------------VLNVRWATDDPNPRA--KAEFKRKAEALAAQAIIKSLPAE---FTLSNNDY-ISKRPRIDDNNQS 255          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A662Y0Z0_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0Z0_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.450e-34
Identity = 89/198 (44.95%), Postives = 116/198 (58.59%), Query Frame = 1
Query:   61 RKARKQADRMEDDG--MEQGSGFNIWYGPRK-----KKRGMNPASSRCNPSTDAGVTRG---SEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPVGAGAA------EAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSL 606
            R ARKQ D M +    +E    +NIWY           RG  PA++RC+   DAG T+    S+A  R FC+ FARG CA+G  C+  H LPS AD+A     HDCFGR+R A+D DD   GVG F + +RTL++GG    +GA       +A+ + F  WG V ++ V+  KA  FV+Y  R SAEFAKEAMGNQ+L
Sbjct:  137 RPARKQLDEMPNANSRLEGAYEYNIWYDKYVGDHWGDSRGKEPAATRCDLQLDAGKTKADVVSKAN-RYFCLHFARGMCARGAECNYYHRLPSVADEARIGMMHDCFGRERHATDRDD-MSGVGNFTRNSRTLYIGGLKSTSGAEAVKAQQDALWKQFGEWGEVENINVIHRKAICFVRYRHRTSAEFAKEAMGNQTL 332          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A1V9YUU5_9STRA (Pre-mRNA-splicing factor cwc2 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUU5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.140e-34
Identity = 86/197 (43.65%), Postives = 112/197 (56.85%), Query Frame = 1
Query:   61 RKARKQADRM--EDDGMEQGSGFNIWYGPR-----KKKRGMNPASSRCNPSTDAGVTRGSEAGARE--FCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPVGAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSLLDNPRL 624
            R ARKQ D M  ++  ME G+ +NIWY           +G +PA  RC   TD G T+  + G     FCI FARG CA+G  C+  H LP+ AD+      HDCFGR+R A+D DD   G G F++ +RTL+VGG    +   + I Q FE WG V +V +V     AF++Y  R SAEFAKEAM  Q+L D+  L
Sbjct:  133 RPARKQIDAMPSKNSRMEGGNEYNIWYDKYVGENWDNTKGQDPAEHRCCIETDGGFTKADKIGKSNKFFCIHFARGGCARGTECNYFHRLPTMADELRLGMLHDCFGRERHATDRDD-MSGTGNFMRNSRTLYVGGLKPKSMVTDIIMQAFEEWGEVENVNIVHRLTTAFIRYRHRTSAEFAKEAMQCQALEDSEIL 328          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A485L7I9_9STRA (Aste57867_17364 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7I9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.810e-34
Identity = 85/194 (43.81%), Postives = 109/194 (56.19%), Query Frame = 1
Query:   52 YDDRKARKQADRMEDDG--MEQGSGFNIWYGPR-----KKKRGMNPASSRCNPSTDAGVTRGSEAGARE--FCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPVGAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSL 606
            Y  R ARKQ D M +    ME  + +NIWY           +  +PA  RC   TDAG T+  + G     FC+ FARG CA+G  C+  H LP+ AD+      HDCFGR+R A+D DD   G G F++ +RTL+VGG    +   + I   F  WG V +V +V   + AFV+Y  R SAEFAKEAMGNQSL
Sbjct:  143 YLTRPARKQIDAMPNRNTRMEGANEYNIWYDKYIGDHWDHTKDQDPAEHRCCLETDAGHTKADKIGKSNKFFCLHFARGGCARGAECNYFHRLPTMADELRLGMLHDCFGRERHATDRDD-MSGTGNFMRNSRTLYVGGLKAKSMQEDIIMAAFAEWGEVENVNIVHRLSVAFVRYRHRTSAEFAKEAMGNQSL 335          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A5D6XM22_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM22_9STRA)

HSP 1 Score: 139 bits (350), Expect = 8.300e-34
Identity = 87/196 (44.39%), Postives = 118/196 (60.20%), Query Frame = 1
Query:   61 RKARKQADRM--EDDGMEQGSGFNIWYGPR-----KKKRGMNPASSRCNPSTDAGVTRG---SEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPVGAGAAEAIQ----QNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSL 606
            R ARKQ + M  ++  +E    +NIWY          +RG  PA++RC  +TDAG T+    S+A  R FC+ FARG CA+G  C+  H +P+ AD+A     HDCFGR+R A+D DD   GVG F + +RTL+VGG   G    + ++    ++FE WG V SV V+   +  FV+Y  R SAEFAKEAMGNQ+L
Sbjct:  182 RPARKQLEHMPSKNTHLEGAHEYNIWYDKYIGDHWSNERGKEPAATRCVLATDAGRTKADVVSKAN-RYFCVHFARGMCARGAECNYYHRVPTMADEARIGMMHDCFGRERHATDRDD-MSGVGNFTRNSRTLYVGGLKSGVERPKQLEATVAKHFEEWGEVESVNVIHRLSICFVRYRHRTSAEFAKEAMGNQAL 375          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A2D4BDZ3_PYTIN (Pre-mRNA-splicing factor cwc2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDZ3_PYTIN)

HSP 1 Score: 138 bits (348), Expect = 1.040e-33
Identity = 91/203 (44.83%), Postives = 117/203 (57.64%), Query Frame = 1
Query:   61 RKARKQADRMEDDG--MEQGSGFNIWYGPR-----KKKRGMNPASSRCNPSTDAGVTRG---SEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPV----GAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSLLDNPRLL 627
            R ARKQ D+M  +   +E    +NIWY          +RG   A++RC+   DAG T+    S+A  R FC+ FARG CA+G  C   H LP+ AD+A     HDCFGR+R A+D DD   GVG F + +RTL+VGG       G     A+ ++FE WG V SV V+   +  FV+Y  R SAEFAKEAM NQSL DN  +L
Sbjct:  152 RPARKQVDQMPTNNTRLEGAYEYNIWYDKYVGDHWSNERGREAATTRCDLELDAGKTKADVVSKAN-RYFCVHFARGMCARGAECSYYHRLPTMADEARIGMMHDCFGRERHATDRDD-MXGVGSFTRNSRTLFVGGLKDLQERGKQVEAAVWKHFEEWGEVESVNVIHRLSICFVRYRHRVSAEFAKEAMANQSL-DNDEVL 351          
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Match: A0A8K1FLE7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLE7_PYTOL)

HSP 1 Score: 136 bits (343), Expect = 3.410e-33
Identity = 88/209 (42.11%), Postives = 125/209 (59.81%), Query Frame = 1
Query:   43 SRMYDDRKARKQADRM--EDDGMEQGSGFNIWYGPR-----KKKRGMNPASSRCNPSTDAGVTRG---SEAGAREFCIFFARGSCAKGFRCHKLHFLPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAP-VGAGAAEA---IQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQSLLDNPRLL 627
            ++ Y  R ARKQ D+M  ++  +E    +NIWY          +RG  PA++RC+   DAG T+    S+A  R FC+ FARG CA+G  C+  H LP+ AD+      HDCFGR+R A+D DD  +GVG F + +RTL+VGG   V  G+ +    + ++F  WG V ++ V+   +  FV++  R SAEFAKEAMGNQ+L DN  +L
Sbjct:  129 NKKYMQRPARKQVDQMPTQNTRLEGAYEYNIWYDKYIGDHWSNERGREPATTRCDLELDAGKTKADMVSKAN-RYFCVHFARGMCARGPECNYYHRLPTMADETRIGMMHDCFGRERHATDRDD-MNGVGNFTRNSRTLYVGGLKNVSEGSKQVEKTLWKHFGEWGEVENINVIHRLSICFVRFRHRVSAEFAKEAMGNQAL-DNEEVL 334          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9464.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJP7_ECTSI7.000e-11063.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7E9_9PHAE1.060e-5364.44C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A067C3P4_SAPPC4.790e-3643.65Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A397TFX7_9GLOM5.800e-3633.10Uncharacterized protein n=1 Tax=Glomus cerebriform... [more]
A0A662Y0Z0_9STRA1.450e-3444.95Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A1V9YUU5_9STRA5.140e-3443.65Pre-mRNA-splicing factor cwc2 (Fragment) n=1 Tax=T... [more]
A0A485L7I9_9STRA5.810e-3443.81Aste57867_17364 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XM22_9STRA8.300e-3444.39Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4BDZ3_PYTIN1.040e-3344.83Pre-mRNA-splicing factor cwc2, putative n=1 Tax=Py... [more]
A0A8K1FLE7_PYTOL3.410e-3342.11Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9464contigD-mesarthrocarpus_Contig9464:1516..4738 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LJP7
Preferred nameCWC2
PFAMsRRM_1,Torus,WW
Model size966
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000974,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016071,GO:0017069,GO:0017070,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034622,GO:0034641,GO:0036002,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0045787,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051726,GO:0060255,GO:0065003,GO:0065007,GO:0071006,GO:0071007,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990904
Exons5
Evalue1.15e-110
EggNOG OGsKOG0118@1|root,KOG0118@2759|Eukaryota
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-17_002850.1
DescriptionRNA binding
Cds size966
COG categoryH
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791100.1607072-CDS-D-mesarthrocarpus_Contig9464:1515..15901680791100.1607072-CDS-D-mesarthrocarpus_Contig9464:1515..1590Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9464 1516..1590 +
1680791100.1786-CDS-D-mesarthrocarpus_Contig9464:1729..17851680791100.1786-CDS-D-mesarthrocarpus_Contig9464:1729..1785Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9464 1730..1785 +
1680791100.1904554-CDS-D-mesarthrocarpus_Contig9464:2002..21451680791100.1904554-CDS-D-mesarthrocarpus_Contig9464:2002..2145Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9464 2003..2145 +
1680791100.207934-CDS-D-mesarthrocarpus_Contig9464:3271..35281680791100.207934-CDS-D-mesarthrocarpus_Contig9464:3271..3528Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9464 3272..3528 +
1680791100.2204628-CDS-D-mesarthrocarpus_Contig9464:4303..47381680791100.2204628-CDS-D-mesarthrocarpus_Contig9464:4303..4738Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9464 4304..4738 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9464.2.1prot_D-mesarthrocarpus_Contig9464.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9464 1516..4738 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9464.2.1

>prot_D-mesarthrocarpus_Contig9464.2.1 ID=prot_D-mesarthrocarpus_Contig9464.2.1|Name=mRNA_D-mesarthrocarpus_Contig9464.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=322bp
MINRKRARGVAQGPSRMYDDRKARKQADRMEDDGMEQGSGFNIWYGPRKK
KRGMNPASSRCNPSTDAGVTRGSEAGAREFCIFFARGSCAKGFRCHKLHF
LPSEADDAAQDNAHDCFGRQRVASDEDDDRDGVGCFLKENRTLWVGGAPV
GAGAAEAIQQNFEVWGHVASVRVVENKACAFVQYSLRASAEFAKEAMGNQ
SLLDNPRLLGTSDGGGGSRSLGLVDGSSGGRRGGTGGGAWARKTGGGRGG
GGGGAVLHVRWASEDPNPRAVDKALTRHAQSLLASQVATGSIPEDLVGWP
LGGADRALLKKCRLDPSNPSPV
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mRNA from alignment at D-mesarthrocarpus_Contig9464:1516..4738+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9464.2.1 ID=mRNA_D-mesarthrocarpus_Contig9464.2.1|Name=mRNA_D-mesarthrocarpus_Contig9464.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3223bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9464:1516..4738+ (Discosporangium mesarthrocarpum MT17_79)
ATGATAAACAGGAAGAGAGCGAGGGGTGTTGCACAAGGCCCTTCCCGTAT GTATGATGATAGGAAAGCAAGAAAGGTAAGATTGGCTGTGCACAGAGGAG CCTCCTCTCACTTGGGATCCATTTTCTGTTGCTTCTGTGGCAAGCAGAGT TTAACAAGATACCCCTTGCATATCTCTTCGTGCTCTTTTTCTCTGCCCGC TGGATACCCTACAGCAAGCTGATAGAATGGAGGACGACGGGATGGAACAA GGGAGCGGTTTCAACATTTGGTAGGCCCTGGCTGGCTTAGTTAAGCTGAA ACTATTTTTGGTCCCCTGTGGTCCTTTCGTGATTCCAGCAAGGTCGTATC TCATATCGCTCCTCAGTGGCGTAGGATGCGCATCCAAACGGGGATGTGCG GATCCATTTATCATGCAGAATCAGAGGGTTCCATCACCTGGGTATACCTG CAGGTAAAATTTCATGCGGATTCCTCTCTCGTCTTAGGTATGGACCCCGG AAAAAGAAGAGGGGGATGAACCCTGCCTCTTCACGATGCAATCCGAGCAC GGACGCTGGCGTGACTCGTGGGAGCGAAGCAGGGGCAAGAGAGTTCTGCA TTTTTTTTGCCAGGGGCTCATGTGCCAAGGGTAAGAGGCCCCTCGGCTAC CGTTCTGGTAGGTGGGAAAGGATTAATTGGAGGATGCGATTTGATTGAAC TGCACCCGTTGAAGCGCAGGCGTGACAACTGTATGGTACAGTGTTTTCTT AAGCTAACGAATAGTACGTAGTAGATTAGTGCCTGGCCTCCTTTTGATGC TTGGGAGTTGGAATAGCTGCAATCCCCGTTCATTCTGGCTTGTGTGAACT ATGTTGTATTGAGCAGACCTCAGACCCCCCTGGCACTATTCACGGCGATC CTTTAGCAGCACCCGGACGCATAGGGTACTGTGCTCACAATACGTGGTAC CTGTCGTCCTTCGAACTGCAGTACGTCAGCAATTTCTTCCATTGTTACAC AGAGCATTCCGTCGAAGTGGCACAGAGAAGAGGCCGCCCCATATGCACCC CCGACCGAACCAGGCTCTCAGCAGCTTCAGAGAGCGCGAACAGTCAAGCT CTCGTGCCCAGTGGTCTTGACGGTTGTCCTGACGCCCTATTTGATATGAT ACGTGTGCATGTATGTGCTTGCCCCCAGTGGTGTCTACCACACTCGCATC ATTCAAAGATGGCAGGACTCCATGCGCAGTGATATTTAGGGCGATTTTTC GAATTTGTTTTTTTTCGATAGGGCTCTGCCCCATCATCCGCCATCCGCCA CGGCTTGCCGATTGGTCGCATCTTTGTGATATGCCCACATTGTGATTGCC CACATTGCACACACCTTAGACCCCATGCGCAAACAGAACTTATCTGGTGG CGCCCGTGCCTATTTTTTTTTACCACTCCTACGGTACAAATATACTTAGT GCCCATACTGTATAGCAGCCCATACATTCATCACCCACCCTGATCATGTT TTTGACGACTGGTTCCCGGTGCTAAACCCTAATACCTAAACTGACTCTAA AAACCCTACGCCAACCCTCTAAACCTGGACCCGCTGCCCCCTCCGCCTCC CGCCTTCCACTACGGTTTGCAACCCTTCTGACGGTAGGTAACACCACAAC CCATCCCATCACAGCACGCACCGCATCATGCCTCTCCTTCCTTTGCATGC CTGCGCCTTCGGTGTGGAACATGGGAAACAAACTGGTGGGGAATGGGGGG GGTCAGGCTTCAGGTGTCACAAGCTGCACTTCCTCCCCTCAGAGGCGGAT GATGCGGCACAGGACAATGCTCATGACTGTTTCGGTCGCCAGCGTGTAGC CAGCGACGAGGATGATGACCGGGATGGGGTGGGCTGCTTCCTGAAGGAGA ACCGGACCCTGTGGGTGGGGGGGGCGCCAGTGGGGGCGGGGGCAGCGGAG GCAATCCAGCAGAACTTCGAGGTGTGGGGGCATGTCGCCTCGGTTAGGGT GGTCGAAAACAAGGTGTGTAGGGAGGGGGCTAGGGTTGGGGTTTGGGGTT GGCATGCTGTACATGATGGTCCTGTTTAATTTGGTCCAGGTTGTACATGG AGCGTGTCTGTCAGAAACACCTCTCAGGTACTGCGAGAACTTGTGCCCTG ACCGTGGAGGGTTCCATTCCTTGTCAAGTGTGAAGCGATTTGGAGGCATC ATTTGAAGTACTGCAAGGTGCTTGGTGTGTGATGGGGGCATGTATCAACA TCAGTGCTGCTATGCGGTGAAAATGTAATGCCTCAAAACGGCACGGACTA CGTGCATTGTAACATAACTCTTCGAAGTTCACCAGAGTGCATGCTGCAGG TAAGTAAGTACCAATCAGGAGCACTTCATGAGGTTGACCCTAACCCTAAC CCTCAGTTTAGCTGCTTCGTGTGGGGCATAACACCCGTCGTGCCTACAAC GGCAGAAGCAGGGAAAGCCCCAGGCCGGTAGGGGTGTGCTTGATTGCACC ATTTCACCCCAGACAATGCGTAGACAGCCCTGCTCCCCAGGTCACTCCTT CGACGTGGATTGAGTGCTTTAGGCTGGGACCAAAAAAATTTCATAGCAAA GGAGGGGTGGCGCGTAGAAGCTGGGTTTCCGGCAGTAACAGCTACATCCG ACTTTGTGGTGCGTACCCTGCCTTACCTTTGCCCTTTAATGCCCTGTCTT ACCTTTGCCTTTTACCTCTGGTGTCCTGGGCAAAAAAACGGCGGCGGCCC AAATGACGACATCAAAACTGGGAAAATAATACAAAAAGGCCTGTGCCTTT GTGCAGTACTCCTTGAGGGCAAGTGCAGAGTTTGCCAAGGAGGCCATGGG GAACCAGTCCCTCCTCGACAACCCCAGACTACTCGGCACCAGCGATGGTG GTGGTGGCAGCAGGTCCCTGGGCCTGGTGGATGGGTCAAGTGGGGGACGG AGGGGGGGAACTGGGGGAGGGGCCTGGGCAAGGAAAACAGGAGGGGGCAG GGGGGGGGGAGGCGGGGGGGCAGTGCTCCACGTGAGATGGGCCAGCGAGG ACCCCAACCCAAGGGCGGTGGACAAGGCGCTGACCAGGCACGCCCAGTCA CTCCTGGCCTCCCAGGTGGCCACGGGGAGCATTCCAGAAGATCTGGTTGG GTGGCCCCTGGGCGGGGCCGATAGGGCTCTCCTGAAGAAGTGTCGGCTGG ACCCCTCCAACCCGTCACCGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9464:1516..4738+

>mRNA_D-mesarthrocarpus_Contig9464.2.1 ID=mRNA_D-mesarthrocarpus_Contig9464.2.1|Name=mRNA_D-mesarthrocarpus_Contig9464.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=966bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9464:1516..4738+ (Discosporangium mesarthrocarpum MT17_79)
ATGATAAACAGGAAGAGAGCGAGGGGTGTTGCACAAGGCCCTTCCCGTAT
GTATGATGATAGGAAAGCAAGAAAGCAAGCTGATAGAATGGAGGACGACG
GGATGGAACAAGGGAGCGGTTTCAACATTTGGTATGGACCCCGGAAAAAG
AAGAGGGGGATGAACCCTGCCTCTTCACGATGCAATCCGAGCACGGACGC
TGGCGTGACTCGTGGGAGCGAAGCAGGGGCAAGAGAGTTCTGCATTTTTT
TTGCCAGGGGCTCATGTGCCAAGGGCTTCAGGTGTCACAAGCTGCACTTC
CTCCCCTCAGAGGCGGATGATGCGGCACAGGACAATGCTCATGACTGTTT
CGGTCGCCAGCGTGTAGCCAGCGACGAGGATGATGACCGGGATGGGGTGG
GCTGCTTCCTGAAGGAGAACCGGACCCTGTGGGTGGGGGGGGCGCCAGTG
GGGGCGGGGGCAGCGGAGGCAATCCAGCAGAACTTCGAGGTGTGGGGGCA
TGTCGCCTCGGTTAGGGTGGTCGAAAACAAGGCCTGTGCCTTTGTGCAGT
ACTCCTTGAGGGCAAGTGCAGAGTTTGCCAAGGAGGCCATGGGGAACCAG
TCCCTCCTCGACAACCCCAGACTACTCGGCACCAGCGATGGTGGTGGTGG
CAGCAGGTCCCTGGGCCTGGTGGATGGGTCAAGTGGGGGACGGAGGGGGG
GAACTGGGGGAGGGGCCTGGGCAAGGAAAACAGGAGGGGGCAGGGGGGGG
GGAGGCGGGGGGGCAGTGCTCCACGTGAGATGGGCCAGCGAGGACCCCAA
CCCAAGGGCGGTGGACAAGGCGCTGACCAGGCACGCCCAGTCACTCCTGG
CCTCCCAGGTGGCCACGGGGAGCATTCCAGAAGATCTGGTTGGGTGGCCC
CTGGGCGGGGCCGATAGGGCTCTCCTGAAGAAGTGTCGGCTGGACCCCTC
CAACCCGTCACCGGTG
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