mRNA_D-mesarthrocarpus_Contig946.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig946.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig946.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig946.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig946contigD-mesarthrocarpus_Contig946:6922..8219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size566
Hectar predicted targeting categoryother localisation
Exons3
Cds size564
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791099.786393-CDS-D-mesarthrocarpus_Contig946:6923..71361680791099.786393-CDS-D-mesarthrocarpus_Contig946:6923..7136Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig946 6924..7136 -
1680791099.801975-CDS-D-mesarthrocarpus_Contig946:7767..79831680791099.801975-CDS-D-mesarthrocarpus_Contig946:7767..7983Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig946 7768..7983 -
1680791099.8149648-CDS-D-mesarthrocarpus_Contig946:8084..82191680791099.8149648-CDS-D-mesarthrocarpus_Contig946:8084..8219Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig946 8085..8219 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig946.5.1prot_D-mesarthrocarpus_Contig946.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig946 6924..8219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig946.5.1

>prot_D-mesarthrocarpus_Contig946.5.1 ID=prot_D-mesarthrocarpus_Contig946.5.1|Name=mRNA_D-mesarthrocarpus_Contig946.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=188bp
GLNGTDVGAEAFVVARQSIKGTSVNGDQASTLAPQQGFPPAGSDQNLAAS
SVPDAFGDCSSNISLTSTKKETKKLCQQEATELRRRGEELDRRINTAKRN
LEVARKRHAFMIEEAQESRIYHAKLSGEMGRVSRVKESLPPGQQSVLAEL
CRLLSAVDAAERAETAALDRNKTLEAGLRAELEDFDRE
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mRNA from alignment at D-mesarthrocarpus_Contig946:6922..8219-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig946.5.1 ID=mRNA_D-mesarthrocarpus_Contig946.5.1|Name=mRNA_D-mesarthrocarpus_Contig946.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1298bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig946:6922..8219- (Discosporangium mesarthrocarpum MT17_79)
GGTCTGAATGGAACTGATGTTGGTGCTGAAGCCTTCGTGGTTGCGAGGCA
GTCGATAAAGGGTACATCTGTAAACGGCGATCAGGCCTCCACCCTTGCGC
CACAACAAGGGTTTCCACCGGCAGGATCAGATCAGGCGAGAAACCCTCGC
CTTGGTGCCCTCTTTCGTTGCGAACTTCTTGACCCTCGTCATTTGTTGTC
TTACACCCGGGCCCTGATTGCTCACTCCTGTGGCAGAACCTTGCGGCTTC
CTCGGTCCCTGATGCTTTCGGGGACTGTTCCAGCAATATATCTCTAACGT
CCACCAAGAAAGAGACGAAGAAGTTGTGTCAGCAGGAGGCGACAGAGTTA
CGGAGGCGAGGTGAAGAGCTCGATCGAAGGATCAATACCGCCAAGCGCAA
CCTGGAGGTAGCACGGAAGCGGCACGCGTTCATGATCGAGGAGGCGCAGG
AGGTAGGCGATCTCAGAAGGTCATCCTTGGTGGCCGGGGCGGTGATCAGC
GCCATGCACGTCCTCGAGACGCAGGTTGAGATGCACCCCCAATGTATGTA
TTATTTATCCTTGGATACTTCTATACGCGGCTGGGAAAACTGGTCGGATT
CACCCGTCGTGCTAGCCAACCTCAGTGTACAGGACACCCCTCTCCCCATT
ATTGGAAGTGAGCAAGCCCGCCTTGGTTTGTGATGAGACCGGTGCATCCA
ACTTCCTCAGCCTTCCTGACCCATCACAGGCAGGAGAGAAATTGCCTCTA
TGCTGAATAGAAGTATCCCATAGCTCGGCAGGCAGAACGATCTAAAAGTG
TCTTACCTGCCACGGAGCTCCGACGTGAACTAGCTATTGTTTGATTGGTT
CTCCGCTGTGGTATTGGAGACAGGGTTTCGGGCGATGCCAAAGTACTGTA
GGAGGCATTGCCCTGTCTTTGCCTTGCAATCCAATGCAATGCCTCAGGGG
ACAGTCCTAGTGGCCTGCTGAATCGCTTTGAAACACACCAAGGTGCCCCG
TTTGCTCCAGCTGTTGAACCCTCTCCCGCTAACCGCCCCCCTCCACCCCG
CACCCCATCCTCCCCTCCCCTGACCCCTGCCAGTCAAGAATCTACCACGC
CAAGCTCTCGGGGGAGATGGGGCGTGTGTCTCGGGTCAAGGAGAGCCTCC
CCCCAGGCCAACAGTCCGTCCTCGCCGAGCTTTGCCGACTGTTGTCGGCC
GTAGACGCGGCAGAGAGGGCTGAAACCGCTGCCCTTGACCGCAACAAGAC
CTTGGAGGCCGGACTCCGAGCAGAACTTGAAGATTTCGACAGGGAAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig946:6922..8219-

>mRNA_D-mesarthrocarpus_Contig946.5.1 ID=mRNA_D-mesarthrocarpus_Contig946.5.1|Name=mRNA_D-mesarthrocarpus_Contig946.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=564bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig946:6922..8219- (Discosporangium mesarthrocarpum MT17_79)
GGTCTGAATGGAACTGATGTTGGTGCTGAAGCCTTCGTGGTTGCGAGGCA
GTCGATAAAGGGTACATCTGTAAACGGCGATCAGGCCTCCACCCTTGCGC
CACAACAAGGGTTTCCACCGGCAGGATCAGATCAGAACCTTGCGGCTTCC
TCGGTCCCTGATGCTTTCGGGGACTGTTCCAGCAATATATCTCTAACGTC
CACCAAGAAAGAGACGAAGAAGTTGTGTCAGCAGGAGGCGACAGAGTTAC
GGAGGCGAGGTGAAGAGCTCGATCGAAGGATCAATACCGCCAAGCGCAAC
CTGGAGGTAGCACGGAAGCGGCACGCGTTCATGATCGAGGAGGCGCAGGA
GTCAAGAATCTACCACGCCAAGCTCTCGGGGGAGATGGGGCGTGTGTCTC
GGGTCAAGGAGAGCCTCCCCCCAGGCCAACAGTCCGTCCTCGCCGAGCTT
TGCCGACTGTTGTCGGCCGTAGACGCGGCAGAGAGGGCTGAAACCGCTGC
CCTTGACCGCAACAAGACCTTGGAGGCCGGACTCCGAGCAGAACTTGAAG
ATTTCGACAGGGAA
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