mRNA_D-mesarthrocarpus_Contig946.12.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig946.12.1
Unique NamemRNA_D-mesarthrocarpus_Contig946.12.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A6H5K8I7_9PHAE (PFK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8I7_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 3.220e-38
Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPR  LHF PTEVR A+VTCGGLCPGLNSV+HHLV+T+L  YKA+KVFGIRGGF+GFYDE  P VEL++  VE LQH+PGSVLG
Sbjct:   65 AGPRPELHFNPTEVRGAIVTCGGLCPGLNSVVHHLVETMLVTYKADKVFGIRGGFAGFYDEATPAVELTSEGVEFLQHQPGSVLG 149
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: D7G165_ECTSI (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G165_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.240e-36
Identity = 64/85 (75.29%), Postives = 72/85 (84.71%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPRA+LHF PTEVRAAVVTCGGLCPGLNSVIHHLV TL  IY AEKVFGI GGF+GF+DE  PP E+S  DVE++QH  GS+LG
Sbjct:  248 AGPRASLHFKPTEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYDAEKVFGIVGGFAGFWDENHPPREMSVKDVELVQHEGGSILG 332
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A6H5KDC4_9PHAE (PFK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC4_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.360e-35
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPRA+LHF P EVRAAVVTCGGLCPGLNSVIHHLV TL  IY AEKVFGI GGF+GF+DE  PP E+S  DVE++QH  GS+LG
Sbjct:  285 AGPRASLHFKPEEVRAAVVTCGGLCPGLNSVIHHLVLTLFNIYGAEKVFGIVGGFAGFWDENHPPKEMSVKDVELIQHEGGSILG 369
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A835ZIU1_9STRA (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIU1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 8.770e-30
Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNA-DVEMLQHRPGSVLG 267
            +GPRA LHF PT V A +VTCG LCPGLNSVIHHLV TL   Y A K++GIRGG+ GF+D EKPP++L  + D+E LQ R GS+LG
Sbjct:  109 AGPRAKLHFDPTTVNACIVTCGLLCPGLNSVIHHLVDTLKNNYNAGKIYGIRGGWGGFWDPEKPPIQLCQSKDLEFLQSRAGSILG 194
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: H6WB78_VAULI (Pyrophosphate-dependant phosphofructokinase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB78_VAULI)

HSP 1 Score: 116 bits (290), Expect = 1.450e-28
Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPR  LHF P    AA+VTCGGLCPGLNSVIHHL +TL+R YKA++V GIRGGF+GF D+   P+EL+   V  LQH+ G++LG
Sbjct:  122 AGPRPVLHFEPKNTVAAIVTCGGLCPGLNSVIHHLTETLVRNYKAKRVIGIRGGFAGFVDKNLEPIELTLIKVNRLQHQGGTLLG 206
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A835ZA90_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA90_9STRA)

HSP 1 Score: 114 bits (285), Expect = 8.240e-28
Identity = 48/85 (56.47%), Postives = 68/85 (80.00%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPR  LHF P +  AA+VTCGGLCPGLNSVIHHL +TL++ Y A++V G+RGGF+GFY+ +  P++L+ + V+ LQH+ G++LG
Sbjct:  141 AGPRPLLHFDPQKTVAAIVTCGGLCPGLNSVIHHLTETLVKNYSAQRVIGVRGGFAGFYNRQLTPLDLTVSRVDRLQHQGGTLLG 225
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A7S2JWY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JWY3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.960e-27
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 1 
Query:    7 IASGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVL 264
            I +GPR  LHF P EVRAA+VTCGGLCPGLN+V+  L   L  +Y A KV GI GG+ GFYD E PP++L+   VE + H+ G+ L
Sbjct:  162 IRAGPREKLHFNPREVRAAIVTCGGLCPGLNNVVRSLTNALFHLYGARKVTGIAGGYKGFYDPEYPPIDLTPEVVEFIHHQGGTFL 247
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A835YV15_9STRA (Pyrophosphate-dependent phosphofructose kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV15_9STRA)

HSP 1 Score: 111 bits (277), Expect = 8.560e-27
Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSN--ADV---EMLQHRPGSVLG 267
            +GPRA LHF P +V AAVVTCG LCPGLNSVIHHL  TL  IY A+KV+G+RGG+ GF++   P +EL +   DV   E LQHR GS+LG
Sbjct:  109 AGPRAKLHFDPVKVNAAVVTCGTLCPGLNSVIHHLRDTLTTIYGAQKVYGVRGGWGGFHNPHTPVIELHDDALDVSGRESLQHRAGSILG 198
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A8J5XCF4_DIALT (Rhodanese domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCF4_DIALT)

HSP 1 Score: 111 bits (278), Expect = 8.910e-27
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPR   HF P +VRAA+VTCGGLCPGLN+VI  +V+ L+ +Y AEKV+G+RGG+ GF D   PPVEL+ A+V  LQH+ G+++G
Sbjct:  171 AGPRDVTHFNPCKVRAAIVTCGGLCPGLNNVIQGIVRALISLYGAEKVYGVRGGYQGFSDPNFPPVELTLANVVGLQHKGGTMIG 255
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BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Match: A0A836C7Q7_9STRA (Pyrophosphate-dependent phosphofructokinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 9.740e-26
Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 1 
Query:   13 SGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAEKVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG 267
            +GPR  LHF P E  AA+VTCGGLCPGLNSVIH++ +TLL+ Y A +V GI+GGF GFYD +  P+EL+   V  LQ++ G++LG
Sbjct:   79 AGPRPLLHFPPKETVAAIVTCGGLCPGLNSVIHYVTETLLQNYGARRVIGIKGGFGGFYDADLEPLELTMDAVNGLQNQGGTLLG 163
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig946.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8I7_9PHAE3.220e-3874.12PFK domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G165_ECTSI1.240e-3675.29Pyrophosphate-dependent phosphofructose kinase n=1... [more]
A0A6H5KDC4_9PHAE1.360e-3574.12PFK domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZIU1_9STRA8.770e-3063.95Pyrophosphate-dependent phosphofructose kinase n=1... [more]
H6WB78_VAULI1.450e-2861.18Pyrophosphate-dependant phosphofructokinase n=1 Ta... [more]
A0A835ZA90_9STRA8.240e-2856.47Pyrophosphate-dependent phosphofructokinase n=1 Ta... [more]
A0A7S2JWY3_9STRA4.960e-2755.81Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A835YV15_9STRA8.560e-2761.11Pyrophosphate-dependent phosphofructose kinase n=1... [more]
A0A8J5XCF4_DIALT8.910e-2757.65Rhodanese domain-containing protein n=1 Tax=Diacro... [more]
A0A836C7Q7_9STRA9.740e-2657.65Pyrophosphate-dependent phosphofructokinase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig946contigD-mesarthrocarpus_Contig946:24441..25588 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FRM0
Preferred namepfk
PFAMsPFK
Model size270
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00850,ko:K01412
KEGG ReactionR00756,R03236,R03237,R03238,R03239,R04779
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230
KEGG ModuleM00001,M00345
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392
Exons2
Evalue7.16e-39
EggNOG OGsCOG0205@1|root,KOG2440@2759|Eukaryota
Ec32 ortholog descriptionPhosphofructokinase
Ec32 orthologEc-12_002540.1
EC2.7.1.11,3.4.24.64
Description6-phosphofructokinase activity
Cds size270
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791100.025116-CDS-D-mesarthrocarpus_Contig946:24440..245931680791100.025116-CDS-D-mesarthrocarpus_Contig946:24440..24593Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig946 24441..24593 +
1680791100.038187-CDS-D-mesarthrocarpus_Contig946:25471..255881680791100.038187-CDS-D-mesarthrocarpus_Contig946:25471..25588Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig946 25472..25588 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig946.12.1prot_D-mesarthrocarpus_Contig946.12.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig946 24441..25588 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig946.12.1

>prot_D-mesarthrocarpus_Contig946.12.1 ID=prot_D-mesarthrocarpus_Contig946.12.1|Name=mRNA_D-mesarthrocarpus_Contig946.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=90bp
WAIASGPRATLHFCPTEVRAAVVTCGGLCPGLNSVIHHLVQTLLRIYKAE
KVFGIRGGFSGFYDEEKPPVELSNADVEMLQHRPGSVLG*
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mRNA from alignment at D-mesarthrocarpus_Contig946:24441..25588+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig946.12.1 ID=mRNA_D-mesarthrocarpus_Contig946.12.1|Name=mRNA_D-mesarthrocarpus_Contig946.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1148bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig946:24441..25588+ (Discosporangium mesarthrocarpum MT17_79)
TGGGCTATCGCGTCAGGGCCCCGGGCCACCCTTCACTTCTGCCCCACGGA
GGTTCGGGCTGCCGTGGTGACCTGTGGCGGCCTGTGCCCAGGCTTGAACA
GCGTCATCCATCACCTAGTGCAGACTCTGCTGCGTATCTACAAGGCTGAA
AAGGTTTGTTTTGGTACTGGAGACCCCCGTGTGGCGGGGGCTCTGTCCCC
TCTTCTCTTCGATTGTTGCCTAGGTTTGTCTCTCTGTTCATCTCTCTCTC
TCTCTGTACATATGTGTGTGTAGTACATATGTGAGACATCAGAAACGCCT
TCGGGTGGGTCGTAAGCCGTGGCGTGTGCTGAGTGACTTCCTGTACGGTA
CTGTCCGCTGGAAAGCTCGGGGCAGGTTCTCTTGGGGAACAACGGGTGGG
GTTAGGGCTCTCTCTTGTTTGAACCCTGCGTGGCACAGGGTTAGGGTTTT
GCTTTCATGTATGATGTTCGCCGCTGCTTACCCTATCAGAACTGCCCCAG
GGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTCAGGG
TCAGGGTTAGGGTCAGGGTTAGGGTTAGAGTTGGGGCTAGGGTTATAGGG
TCAGGGTTCAGAGTGCTGGGGAAAACGGGGGGGGGGGTCTCCGAATCATC
TTGGTGGTGGGAAAGAGAGTTGCGGCCATGGGCTTGCCTAACCCCCATGA
TTGTTGATGTTGATTGCTGTGGCATGGGGGATTGGGGAGGGTGGGTGGGG
GGGTGCATGGCGCAATGACATGCCGTGGTGTGCTGTGTTGTGCCGTGCCT
TGGATTTTCTTTGCTGCCCGACACCCCCGAGCACTCCACCTCACCATTCA
GATGTATGCCTTGGCTGTGCTTTGGTAGCAACAACCAGGAGGTACATAAA
TAGAGGTAAGGCGTTATGACGCTGCAGACACTGACCAGCTACCTTTCCCC
CCCTCTTCTTCACCTCCCCTGGAAAAAAATGTTCGCCTTGGTGGGCGTGT
ATTGTGTCGCTCGTACACCCACGCGCTTCAGGTTTTTGGCATCCGGGGGG
GTTTTTCCGGCTTCTATGATGAGGAGAAGCCGCCGGTTGAGCTCAGTAAC
GCCGATGTGGAGATGCTGCAGCACCGACCAGGGTCTGTGCTGGGGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig946:24441..25588+

>mRNA_D-mesarthrocarpus_Contig946.12.1 ID=mRNA_D-mesarthrocarpus_Contig946.12.1|Name=mRNA_D-mesarthrocarpus_Contig946.12.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=270bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig946:24441..25588+ (Discosporangium mesarthrocarpum MT17_79)
TGGGCTATCGCGTCAGGGCCCCGGGCCACCCTTCACTTCTGCCCCACGGA
GGTTCGGGCTGCCGTGGTGACCTGTGGCGGCCTGTGCCCAGGCTTGAACA
GCGTCATCCATCACCTAGTGCAGACTCTGCTGCGTATCTACAAGGCTGAA
AAGGTTTTTGGCATCCGGGGGGGTTTTTCCGGCTTCTATGATGAGGAGAA
GCCGCCGGTTGAGCTCAGTAACGCCGATGTGGAGATGCTGCAGCACCGAC
CAGGGTCTGTGCTGGGGTGA
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