mRNA_D-mesarthrocarpus_Contig9456.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9456.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9456.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.680e-65
Identity = 109/136 (80.15%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQSIS+LAYL+E RGI GPHIV+VPKSTVGNW+REFKRWCP+IKTV+LLGNKAERK +CE  ++   FDA VASYE+VLKE  TLKKIKW+YLLIDEAHRIKNENSSLSK VR L+T+FRLLITGTPLQ
Sbjct:  244 EMGLGKTLQSISVLAYLKEDRGINGPHIVIVPKSTVGNWMREFKRWCPSIKTVKLLGNKAERKTVCENVLDTGNFDACVASYESVLKESSTLKKIKWRYLLIDEAHRIKNENSSLSKTVRLLSTQFRLLITGTPLQ 379
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A835ZE29_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE29_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.450e-59
Identity = 104/148 (70.27%), Postives = 118/148 (79.73%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIK------------NENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQSISLLAYLRE RGI GPH+V+VPKSTVGNW+REF+RWCP I  V+LLG+K ERKA+CE  I P KFD VV SYE VLKE+ TL KIKWKYL+IDEAHRIK            NE SSLS+ VR ++T+FRLLITGTPLQ
Sbjct:  131 EMGLGKTLQSISLLAYLREGRGIHGPHVVIVPKSTVGNWIREFERWCPKINVVKLLGSKDERKAVCETRIAPGKFDVVVTSYECVLKEKATLTKIKWKYLMIDEAHRIKASAPRHTRAAAINEKSSLSRQVRLMSTRFRLLITGTPLQ 278
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: D8LDI0_ECTSI (Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDI0_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 3.440e-57
Identity = 98/125 (78.40%), Postives = 110/125 (88.00%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTK 375
            +MGLGKTLQSIS+LAYL+E RGI GPHIV+VPKSTVGNW+REFKRWCP+IKTV+LLGNKAERKA+CE  ++   FDA VASYE+VLKE  TLKKIKW+YLLIDEAHRIKNENSSLSK V   T K
Sbjct:  320 EMGLGKTLQSISVLAYLKEDRGINGPHIVIVPKSTVGNWMREFKRWCPSIKTVKLLGNKAERKAVCENVLDTGNFDACVASYESVLKESSTLKKIKWRYLLIDEAHRIKNENSSLSKTVSLETDK 444
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A7S2LL85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LL85_9STRA)

HSP 1 Score: 200 bits (509), Expect = 3.720e-57
Identity = 98/142 (69.01%), Postives = 117/142 (82.39%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQ------KFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQ+ISLLAYLRE+RGI+GPHIVVVPKS VGNW++EFK+WCP IKT+++LG KAERK +    + P       KFD  V SYE +L+E+G+L KI WKYL+IDEAHRIKNENSSLSK VR L T+FR+LITGTPLQ
Sbjct:  204 EMGLGKTLQTISLLAYLRESRGIRGPHIVVVPKSVVGNWIKEFKKWCPQIKTLKMLGTKAERKHVTSVELPPDPKTGKHKFDVFVTSYEGILREKGSLCKINWKYLIIDEAHRIKNENSSLSKAVRLLDTQFRILITGTPLQ 345
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A2P4YDL3_9STRA (Chromatin-remodeling complex ATPase chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YDL3_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.240e-56
Identity = 93/136 (68.38%), Postives = 113/136 (83.09%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQSISLLAYLREARGI+GPHI++VPKSTVGNW+RE KRWCP+IK  + +G+K ER A+  E +  Q FDA+V SYE  + E+  L+KIKW+YLLIDEAHR+KNENS LS+VVR+   + RLLITGTPLQ
Sbjct:  223 EMGLGKTLQSISLLAYLREARGIEGPHIIIVPKSTVGNWMRELKRWCPSIKAFKFMGSKEER-AVQRETVVKQDFDALVLSYEVAIIEKSILQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQ 357
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A2P4XE99_9STRA (SWI/SNF related (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XE99_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.670e-56
Identity = 93/136 (68.38%), Postives = 113/136 (83.09%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQSISLLAYLREARGI+GPHI++VPKSTVGNW+RE KRWCP+IK  + +G+K ER A+  E +  Q FDA+V SYE  + E+  L+KIKW+YLLIDEAHR+KNENS LS+VVR+   + RLLITGTPLQ
Sbjct:  183 EMGLGKTLQSISLLAYLREARGIEGPHIIIVPKSTVGNWMRELKRWCPSIKAFKFMGSKEER-AVQRETVVKQDFDALVLSYEVAIIEKSILQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQ 317
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A7S1UCP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCP6_9STRA)

HSP 1 Score: 192 bits (487), Expect = 6.220e-56
Identity = 90/136 (66.18%), Postives = 112/136 (82.35%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQ+ISL+AYLREAR + GPHIV+VPK+  GNW+REF +WCPA+KT++LLG K ERK I  E + P  FD +V SYE +L+E+ +L K+ W+YL+IDEAHRIKNENSSLS+VVR + T  RLLITGTPLQ
Sbjct:   23 EMGLGKTLQTISLVAYLREARNVTGPHIVIVPKTVTGNWMREFAKWCPAVKTLKLLGGKHERKRILREEMLPGNFDVLVTSYECILREKASLIKVPWRYLIIDEAHRIKNENSSLSRVVRTMETNNRLLITGTPLQ 158
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A6U5FX50_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5FX50_9STRA)

HSP 1 Score: 196 bits (497), Expect = 7.440e-56
Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICE-----EHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQ+ISLLA+LRE RG+KGPH+V+VPKS VGNW+ E K+WCP I+ ++LLGNK ERK +C+     E     +FD +V SYE +L+E+GTL KI W YL+IDEAHRIKNENSSLSKVVR + TKFR+LITGTPLQ
Sbjct:  223 EMGLGKTLQTISLLAWLREGRGVKGPHLVIVPKSVVGNWMNELKKWCPVIRGLKLLGNKEERKRVCKLILPNESTGKFRFDVLVTSYEGILREKGTLTKISWNYLIIDEAHRIKNENSSLSKVVRLMHTKFRILITGTPLQ 363
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A7S1XXA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXA1_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.450e-55
Identity = 90/136 (66.18%), Postives = 112/136 (82.35%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQ+ISL+AYLREAR + GPHIV+VPK+  GNW+REF +WCPA+KT++LLG K ERK I  E + P  FD +V SYE +L+E+ +L K+ W+YL+IDEAHRIKNENSSLS+VVR + T  RLLITGTPLQ
Sbjct:   23 EMGLGKTLQTISLVAYLREARNVTGPHIVIVPKTVTGNWMREFAKWCPAVKTLKLLGGKHERKRILREEMLPGNFDVLVTSYECILREKASLIKVPWRYLIIDEAHRIKNENSSLSRVVRTMETNNRLLITGTPLQ 158
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BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Match: A0A7S1BEM4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BEM4_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.090e-55
Identity = 94/141 (66.67%), Postives = 115/141 (81.56%), Query Frame = 1 
Query:    1 QMGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIKTVRLLGNKAERKAICE-----EHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLLIDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ 408
            +MGLGKTLQ+ISLLA+LRE RG+KGPH+V+VPKS VGNW+ E K+WCP I+ ++LLGNK ERK +C+     E     +FD +V SYE +L+E+GTL KI W YL+IDEAHRIKNENSSLSKVVR + TKFR+LITGTPLQ
Sbjct:  223 EMGLGKTLQTISLLAWLREGRGVKGPHLVIVPKSVVGNWMNELKKWCPVIRGLKLLGNKEERKRVCKLILPNESTGKFRFDVLVTSYEGILREKGTLTKISWNYLIIDEAHRIKNENSSLSKVVRLMHTKFRILITGTPLQ 363
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9456.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHP7_9PHAE1.680e-6580.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZE29_9STRA2.450e-5970.27P-loop containing nucleoside triphosphate hydrolas... [more]
D8LDI0_ECTSI3.440e-5778.40Ci-SWI/SNF n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S2LL85_9STRA3.720e-5769.01Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A2P4YDL3_9STRA1.240e-5668.38Chromatin-remodeling complex ATPase chain n=1 Tax=... [more]
A0A2P4XE99_9STRA2.670e-5668.38SWI/SNF related (Fragment) n=1 Tax=Phytophthora pa... [more]
A0A7S1UCP6_9STRA6.220e-5666.18Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A6U5FX50_9STRA7.440e-5666.67Hypothetical protein n=3 Tax=Corethron hystrix Tax... [more]
A0A7S1XXA1_9STRA1.450e-5566.18Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1BEM4_9STRA2.090e-5566.67Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9456contigD-mesarthrocarpus_Contig9456:2034..3964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LDI0
Preferred nameSMARCA5
PFAMsDBINO,HAND,Helicase_C,SLIDE,SNF2_N
Model size408
Max annot lvl2759|Eukaryota
KEGG koko:K11654,ko:K11727
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000166,GO:0000182,GO:0000183,GO:0000228,GO:0000733,GO:0000785,GO:0000790,GO:0000793,GO:0000819,GO:0000981,GO:0001067,GO:0001178,GO:0001410,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005677,GO:0005694,GO:0005700,GO:0005730,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006363,GO:0006366,GO:0006369,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007062,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007338,GO:0007399,GO:0007417,GO:0007420,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008623,GO:0009058,GO:0009059,GO:0009373,GO:0009553,GO:0009561,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0014070,GO:0015616,GO:0016043,GO:0016070,GO:0016458,GO:0016462,GO:0016584,GO:0016587,GO:0016589,GO:0016590,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017053,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019236,GO:0019237,GO:0019438,GO:0019953,GO:0019954,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030182,GO:0030435,GO:0030436,GO:0030447,GO:0030518,GO:0030522,GO:0030554,GO:0030575,GO:0030874,GO:0031010,GO:0031055,GO:0031213,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032870,GO:0032991,GO:0033043,GO:0033044,GO:0033993,GO:0034080,GO:0034097,GO:0034401,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035039,GO:0035041,GO:0035063,GO:0035075,GO:0035076,GO:0035092,GO:0035639,GO:0035690,GO:0036094,GO:0036310,GO:0036314,GO:0036315,GO:0036436,GO:0036437,GO:0040007,GO:0040026,GO:0040028,GO:0040029,GO:0040034,GO:0042127,GO:0042221,GO:0042493,GO:0042623,GO:0042752,GO:0042766,GO:0043044,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043401,GO:0043486,GO:0043565,GO:0043933,GO:0043934,GO:0043936,GO:0043954,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0045996,GO:0046019,GO:0046020,GO:0046483,GO:0046688,GO:0048229,GO:0048232,GO:0048468,GO:0048506,GO:0048509,GO:0048510,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060194,GO:0060195,GO:0060255,GO:0060260,GO:0060303,GO:0060322,GO:0061062,GO:0061063,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0070615,GO:0070827,GO:0070828,GO:0070829,GO:0070868,GO:0070870,GO:0070887,GO:0070925,GO:0071103,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071345,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071444,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090537,GO:0090568,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0097549,GO:0097617,GO:0097659,GO:0098813,GO:0140097,GO:0140110,GO:1900034,GO:1900036,GO:1900049,GO:1900050,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904949,GO:1905268,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000142,GO:2000177,GO:2001141,GO:2001251
Exons3
Evalue7.42e-58
EggNOG OGsCOG0553@1|root,KOG0385@2759|Eukaryota
Descriptionhelicase activity
Cds size405
COG categoryKL
BRITEko00000,ko01000,ko03021,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791099.5002882-UTR-D-mesarthrocarpus_Contig9456:2033..20361680791099.5002882-UTR-D-mesarthrocarpus_Contig9456:2033..2036Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9456 2034..2036 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791099.515719-CDS-D-mesarthrocarpus_Contig9456:2036..21381680791099.515719-CDS-D-mesarthrocarpus_Contig9456:2036..2138Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9456 2037..2138 +
1680791099.5317953-CDS-D-mesarthrocarpus_Contig9456:2923..31051680791099.5317953-CDS-D-mesarthrocarpus_Contig9456:2923..3105Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9456 2924..3105 +
1680791099.5471776-CDS-D-mesarthrocarpus_Contig9456:3843..39641680791099.5471776-CDS-D-mesarthrocarpus_Contig9456:3843..3964Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9456 3844..3964 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9456.2.1prot_D-mesarthrocarpus_Contig9456.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9456 2037..3964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9456.2.1

>prot_D-mesarthrocarpus_Contig9456.2.1 ID=prot_D-mesarthrocarpus_Contig9456.2.1|Name=mRNA_D-mesarthrocarpus_Contig9456.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=135bp
MGLGKTLQSISLLAYLREARGIKGPHIVVVPKSTVGNWLREFKRWCPAIK
TVRLLGNKAERKAICEEHIEPQKFDAVVASYEAVLKEQGTLKKIKWKYLL
IDEAHRIKNENSSLSKVVRQLTTKFRLLITGTPLQ
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mRNA from alignment at D-mesarthrocarpus_Contig9456:2034..3964+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9456.2.1 ID=mRNA_D-mesarthrocarpus_Contig9456.2.1|Name=mRNA_D-mesarthrocarpus_Contig9456.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1931bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9456:2034..3964+ (Discosporangium mesarthrocarpum MT17_79)
CAGATGGGTCTGGGGAAGACCCTACAGAGCATCTCACTCCTGGCGTACCT
CAGGGAGGCTAGGGGGATCAAGGGGCCTCACATCGTTGTCGTCCCCAAGT
CGACGGTGAGCCAATGGGGTCGGGTCTTGCGGGTTGGGAGATTGGGATTG
GGGTTGGGGTTGGGGTTGGGGCCAGAGTCAGGGAAAAGCGATTCGGGGAA
GGGCTACTGATGTGTGCAGTCTGCCACCGTATCCTGTGAGAAAGAGGAGG
ATTGTTTTTTTTTCCCTTTTTTGTTGGTCGTTGTGGGTGTCAGTCTACCA
CTGTTTGAGGAGAGCGAGGGTTGGGATGGGGTTAGCGTTAGGGTTTAGGC
TGTTGAGGTAGAAATCCGTGATGCCACGGGATTCCAGTCCATTCTGATGG
AGAAGGATGTGTGGTAAAATAAAAAAGAGAGGCAAGATGAAAAATGGAAA
ACAAGAAGACTTGAAGTGTTTCAAGATCATTAAGTTACTACAGTTATTTG
GTCCACTCAAAGTCCCTGATGGATCTAGGCCCTCTGACCTGTGACCTTGC
ACTGATCAAGATGGAGGACAGAGTACGGAACAGATCAACAAAGTGCTGGG
TTGAAAAAAAGAAAAAAGAAAAAAAAATCTGTGAAAAAGAAAAAGATGAA
AAAAGGGGGGAGGGGGGAAGAAAAAAGTCCGGTAGGAGAGGAAAAATCTC
CTCCCTCAGTACACGCGGAGGCAAAGGAACTTGAAAAACCCTAACATGAA
GGGGAAAAAGATCGAAAAAGAGTAGTTGTTTCAGGGAAAAATCGATCACA
ACAAAAAATCGAAAAAAGTACATTTTTGTTGGGGGGGGGGATATTGACAT
CTAAAAGACCCTAGACAAAACAACAAAAACAAAACAACAGGTGGGCAATT
GGTTGCGGGAGTTCAAGAGGTGGTGTCCTGCGATCAAGACCGTCCGACTC
CTGGGGAACAAGGCAGAGCGCAAGGCCATCTGTGAGGAGCATATCGAGCC
CCAGAAGTTTGACGCCGTGGTGGCCTCGTACGAGGCTGTGCTTAAGGAGC
AAGGCACCCTCAAGAAGATCAAGTGAGGGAGGGGAGGGGGGAGGAATTGG
GCAGTGGGGCAGTAGGCAGCTTGCAGAGGGGAGAGTGGGGCATTGGGGCA
GGAACGTGTTGGCTAGTTCTGTGCATGTAGGTCAACTATGTACGTACATC
ACCTGTAGGCAAGCAGGCGTTTTTTTGGCTCACTCTGTTGTGTGGCGTGC
TTGTGCCATGGTGTACAGGGGAAAGAGTTGCATTTTTTTGCGGGGTTAGC
CTTTGGGATTGTGCTTTGACCGTCGGTCAAGCGGATAACCTTGGGAGGTT
TAGGGTTAGGGTTGGGGTTGAGGTTGGGGTTGAGGTTGAAGTTCATGTTG
GGGTGGGGTGGGGTTAGGCTGGCCTGGCCTGAAAGGAGGAGTTGCCTCCC
TTATTTAATGACCCCCTTCCCCAGTGGAGAGGTAGGCGGGCCTGACCAGG
TAGACTGGAGATTTAATGGAAAATACTTGGAAGCAGTGGCCTCACAAGAC
AGCACTAGCTCTTGGACCCCCTTCTCTCCCCCCTCTCCCTCTTTTCTTTT
TTTTTCTACGAAACTGTCCCTAACCCTGACCCTAGCCTTAACCCTACCCC
TAGCCCTAACCCTACCCTTAGTCCTGACCCTACCCCCCCGGGTGAAATTA
GCTCTTCGATTGATGAGACCCACCTTCTTTGTAAATGGACTATAACCCCA
CAACCCTATACCCTAACCCTATAACTCCACCCCTGTCACCCCAACCCTAC
CCCCCTGTAGGTGGAAGTACCTCCTAATCGACGAGGCACACCGCATCAAG
AACGAGAACTCGTCGCTCTCCAAAGTGGTGCGGCAGCTCACCACCAAGTT
CCGCCTCCTCATCACAGGAACTCCTCTGCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9456:2034..3964+

>mRNA_D-mesarthrocarpus_Contig9456.2.1 ID=mRNA_D-mesarthrocarpus_Contig9456.2.1|Name=mRNA_D-mesarthrocarpus_Contig9456.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=405bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9456:2034..3964+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGTCTGGGGAAGACCCTACAGAGCATCTCACTCCTGGCGTACCTCAG
GGAGGCTAGGGGGATCAAGGGGCCTCACATCGTTGTCGTCCCCAAGTCGA
CGGTGGGCAATTGGTTGCGGGAGTTCAAGAGGTGGTGTCCTGCGATCAAG
ACCGTCCGACTCCTGGGGAACAAGGCAGAGCGCAAGGCCATCTGTGAGGA
GCATATCGAGCCCCAGAAGTTTGACGCCGTGGTGGCCTCGTACGAGGCTG
TGCTTAAGGAGCAAGGCACCCTCAAGAAGATCAAGTGGAAGTACCTCCTA
ATCGACGAGGCACACCGCATCAAGAACGAGAACTCGTCGCTCTCCAAAGT
GGTGCGGCAGCTCACCACCAAGTTCCGCCTCCTCATCACAGGAACTCCTC
TGCAG
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