mRNA_D-mesarthrocarpus_Contig945.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig945.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig945.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A6H5JNY5_9PHAE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY5_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.050e-27
Identity = 50/84 (59.52%), Postives = 67/84 (79.76%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            MKV +LFFASCRE+AGTKET +EL G++S+ ++LRE +V+  P +  VA  +TLA+NQEY+   ++A L +GDEVAFIPPISGG
Sbjct:    1 MKVKVLFFASCREMAGTKETSLELPGDSSSIAQLREHIVKKLPGLQPVAATVTLALNQEYLDPEQDAPLKEGDEVAFIPPISGG 84
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BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: D8LMR2_ECTSI (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR2_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 4.620e-26
Identity = 48/83 (57.83%), Postives = 65/83 (78.31%), Query Frame = 1 
Query:    4 KVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            +V +LFFASCRE+AGTKET +EL G++S+ ++LRE +V   P +  VA  +TLA+NQEY+   ++A L +GDEVAFIPPISGG
Sbjct:   24 QVKVLFFASCREMAGTKETSLELPGDSSSIAQLREHIVEKLPGLQPVAATVTLALNQEYLDPEQDATLKEGDEVAFIPPISGG 106
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BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A835YXW6_9STRA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.890e-25
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            MKV +LFFASCRELAGTKE  + L+G  ++T  LR+++V   P +  VA  ITLAVN EY   G+N  L DGDEVA IPPISGG
Sbjct:    1 MKVKVLFFASCRELAGTKEIAVTLEGAENSTEALRKKLVELLPALEPVAWGITLAVNHEYTDPGQNVQLKDGDEVALIPPISGG 84
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A7J7QQ03_9CHLO (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQ03_9CHLO)

HSP 1 Score: 76.3 bits (186), Expect = 1.880e-16
Identity = 39/84 (46.43%), Postives = 57/84 (67.86%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            MKVN+L+FA  RE+ G  + E+E++ + STT +L EQ++ ++P + +V      AVNQEYV   +   L DGDE+A IPP+SGG
Sbjct:    1 MKVNVLYFAISREVVGKSQEELEVE-DGSTTHKLLEQLLASYPGLQSVMKACVFAVNQEYVPPSQALTLKDGDEIAIIPPLSGG 83
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BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A6P4Z232_BRABE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z232_BRABE)

HSP 1 Score: 76.3 bits (186), Expect = 2.450e-16
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENA-NLNDGDEVAFIPPISGG 252
            ++VN+LFFA  REL G+KE  + + G+T T+++L   +V  +P +  ++ ++ LAVNQEYV  G +   L  GDEVA IPPISGG
Sbjct:   10 VQVNLLFFAKSRELVGSKEATLAVPGQT-TSAQLLAAIVSRYPSLAVISNNLVLAVNQEYVAPGNDLLTLQPGDEVAVIPPISGG 93
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BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A836UMA0_9BACT (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Candidatus Handelsmanbacteria bacterium TaxID=2099671 RepID=A0A836UMA0_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 1.460e-15
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            MK+  LFFA+CR++ G +E ++++ GE S   +L+  ++  +P + T+   +++AVN EYV    N  LN GDEVAFIPP+SGG
Sbjct:    1 MKIKALFFAACRDIIGNRELDLDV-GEGSQVEDLKNVLLVKYPELATINNVLSIAVNAEYVDG--NTILNPGDEVAFIPPVSGG 81
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BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A2E7JL17_9BACT (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E7JL17_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 2.070e-15
Identity = 37/84 (44.05%), Postives = 57/84 (67.86%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            MK+  LFFASCR++ G +E ++++  E +   ELR +++  +PR+  +   +++AVN EYV   +   LN GDEVAFIPP+SGG
Sbjct:    1 MKIKALFFASCRDIVGNREMDLDV-AEGARVQELRSELLGNYPRLAALDEVLSIAVNSEYVD--DTTILNPGDEVAFIPPVSGG 81
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A2V0PHR4_9CHLO (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHR4_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 4.390e-15
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            M+V +L+FA  RE+AG  E  ++L    +TTS L + +    P +  V T   +AVN EYV AGE A L +GDEVA IPP+SGG
Sbjct:    1 MRVRVLYFARSREVAGAPEEALDLPPG-ATTSSLLDDLRSRHPGLAGVLTSCVVAVNHEYVAAGEAAELREGDEVAIIPPLSGG 83
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A2P6TZ70_CHLSO (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TZ70_CHLSO)

HSP 1 Score: 72.4 bits (176), Expect = 6.230e-15
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            M V +LFFA  RELAGT E  + L+   STT+ L +Q+++ +P++  +      ++NQEY+  GE   L  GDEVA IPPISGG
Sbjct:    1 MDVRVLFFARSRELAGTSEASVTLEPG-STTTVLLQQLLQKYPQLQELQGSFVFSLNQEYLAPGEEQPLKGGDEVAVIPPISGG 83
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Match: A0A6B1HRC7_9BACT (Molybdopterin synthase sulfur carrier subunit n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6B1HRC7_9BACT)

HSP 1 Score: 71.2 bits (173), Expect = 1.690e-14
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 1 
Query:    1 MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVATDITLAVNQEYVGAGENANLNDGDEVAFIPPISGG 252
            MK+ +LFFASCR+  G +  E E+  E    ++L+ ++V A+P++  V   +++AVN EY  AG +  L  GDEVA IPP+SGG
Sbjct:    1 MKIKVLFFASCRDAVGLRSCEWEI-AEGYRVADLQRELVAAYPQLAAVQQVLSIAVNSEY--AGSHTALKAGDEVALIPPVSGG 81
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig945.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNY5_9PHAE1.050e-2759.52Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
D8LMR2_ECTSI4.620e-2657.83Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A835YXW6_9STRA2.890e-2559.52Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A7J7QQ03_9CHLO1.880e-1646.43Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A6P4Z232_BRABE2.450e-1647.06Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A836UMA0_9BACT1.460e-1544.05Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A2E7JL17_9BACT2.070e-1544.05Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A2V0PHR4_9CHLO4.390e-1547.62Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A2P6TZ70_CHLSO6.230e-1546.43Molybdopterin synthase sulfur carrier subunit n=1 ... [more]
A0A6B1HRC7_9BACT1.690e-1444.05Molybdopterin synthase sulfur carrier subunit n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig945contigD-mesarthrocarpus_Contig945:12253..12507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMR2
Preferred nameMOCS2
PFAMsThiS
Model size255
Max annot lvl2759|Eukaryota
KEGG rclassRC02507
KEGG koko:K03635,ko:K21232
KEGG ReactionR09395
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009719,GO:0009725,GO:0009733,GO:0009734,GO:0009755,GO:0009987,GO:0010033,GO:0018130,GO:0018315,GO:0019538,GO:0019637,GO:0019720,GO:0023052,GO:0032870,GO:0036211,GO:0042040,GO:0042221,GO:0043170,GO:0043412,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051716,GO:0065007,GO:0070887,GO:0071310,GO:0071365,GO:0071495,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue7.58e-27
EggNOG OGsKOG3474@1|root,KOG3474@2759|Eukaryota
EC2.8.1.12
DescriptionMo-molybdopterin cofactor metabolic process
Cds size255
COG categoryJ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791099.1383834-CDS-D-mesarthrocarpus_Contig945:12252..125071680791099.1383834-CDS-D-mesarthrocarpus_Contig945:12252..12507Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 12253..12507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig945.4.1prot_D-mesarthrocarpus_Contig945.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig945 12253..12507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig945.4.1

>prot_D-mesarthrocarpus_Contig945.4.1 ID=prot_D-mesarthrocarpus_Contig945.4.1|Name=mRNA_D-mesarthrocarpus_Contig945.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=85bp
MKVNILFFASCRELAGTKETEMELDGETSTTSELREQVVRAFPRMVTVAT
DITLAVNQEYVGAGENANLNDGDEVAFIPPISGG*
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mRNA from alignment at D-mesarthrocarpus_Contig945:12253..12507-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig945.4.1 ID=mRNA_D-mesarthrocarpus_Contig945.4.1|Name=mRNA_D-mesarthrocarpus_Contig945.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=255bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig945:12253..12507- (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGTAAACATCCTCTTCTTCGCCTCCTGCAGGGAGCTGGCTGGGAC
CAAGGAAACTGAGATGGAGTTGGATGGGGAGACGTCCACCACCTCAGAGC
TAAGGGAACAGGTCGTGAGGGCTTTCCCGAGGATGGTTACCGTGGCCACC
GACATTACCCTAGCAGTAAACCAGGAATACGTCGGTGCGGGAGAGAATGC
TAATCTCAACGATGGAGATGAAGTGGCGTTCATTCCCCCCATCAGCGGTG
GGTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig945:12253..12507-

>mRNA_D-mesarthrocarpus_Contig945.4.1 ID=mRNA_D-mesarthrocarpus_Contig945.4.1|Name=mRNA_D-mesarthrocarpus_Contig945.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=255bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig945:12253..12507- (Discosporangium mesarthrocarpum MT17_79)
ATGAAGGTAAACATCCTCTTCTTCGCCTCCTGCAGGGAGCTGGCTGGGAC
CAAGGAAACTGAGATGGAGTTGGATGGGGAGACGTCCACCACCTCAGAGC
TAAGGGAACAGGTCGTGAGGGCTTTCCCGAGGATGGTTACCGTGGCCACC
GACATTACCCTAGCAGTAAACCAGGAATACGTCGGTGCGGGAGAGAATGC
TAATCTCAACGATGGAGATGAAGTGGCGTTCATTCCCCCCATCAGCGGTG
GGTGA
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