mRNA_D-mesarthrocarpus_Contig945.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig945.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig945.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig945.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig945contigD-mesarthrocarpus_Contig945:2222..6920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1406
Hectar predicted targeting categoryother localisation
Exons9
Cds size1026
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig945.2.1prot_D-mesarthrocarpus_Contig945.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig945 3163..6920 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791098.871729-UTR-D-mesarthrocarpus_Contig945:2221..22951680791098.871729-UTR-D-mesarthrocarpus_Contig945:2221..2295Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig945 2222..2295 +
1680791098.8924437-UTR-D-mesarthrocarpus_Contig945:2636..28681680791098.8924437-UTR-D-mesarthrocarpus_Contig945:2636..2868Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig945 2637..2868 +
1680791098.906268-UTR-D-mesarthrocarpus_Contig945:3088..31621680791098.906268-UTR-D-mesarthrocarpus_Contig945:3088..3162Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig945 3089..3162 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791098.9208975-CDS-D-mesarthrocarpus_Contig945:3162..31951680791098.9208975-CDS-D-mesarthrocarpus_Contig945:3162..3195Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 3163..3195 +
1680791098.9401944-CDS-D-mesarthrocarpus_Contig945:3481..35431680791098.9401944-CDS-D-mesarthrocarpus_Contig945:3481..3543Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 3482..3543 +
1680791098.9606094-CDS-D-mesarthrocarpus_Contig945:4092..43841680791098.9606094-CDS-D-mesarthrocarpus_Contig945:4092..4384Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 4093..4384 +
1680791098.9783487-CDS-D-mesarthrocarpus_Contig945:4982..50561680791098.9783487-CDS-D-mesarthrocarpus_Contig945:4982..5056Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 4983..5056 +
1680791098.9954133-CDS-D-mesarthrocarpus_Contig945:5634..59851680791098.9954133-CDS-D-mesarthrocarpus_Contig945:5634..5985Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 5635..5985 +
1680791099.0050476-CDS-D-mesarthrocarpus_Contig945:6339..64651680791099.0050476-CDS-D-mesarthrocarpus_Contig945:6339..6465Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 6340..6465 +
1680791099.0185544-CDS-D-mesarthrocarpus_Contig945:6832..69201680791099.0185544-CDS-D-mesarthrocarpus_Contig945:6832..6920Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig945 6833..6920 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig945.2.1

>prot_D-mesarthrocarpus_Contig945.2.1 ID=prot_D-mesarthrocarpus_Contig945.2.1|Name=mRNA_D-mesarthrocarpus_Contig945.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=342bp
MDRGFDIIPGLVATLEGGNIDLTQGQQDTFCSNGDSPHKKQHSDGARGER
FPAGGKESAGQSTSRRGHSTSAAAAPIPGIVLSAILSFLPAPEAVSLILR
SRSKQRHVEVGRHCLQRMETVFQGVSQAKASQGTKDQLLAECVQPPLLHP
LHPRPPSTLNLGDMEQLDLIFKVSHAHVTGHYPTSHQTSDSKGPGSNKSC
SFKNSQGLMCPELKPVRGQEGSGRLETGGDRDGGRADKATKRLSEQCHGL
LSILAAVTHRFLLNAPGVNFSNVGILTDCLHPGQLNHVVDFGDSVASHGM
HEMDTFPLAVVSGVCVLDLRSPVYVCLPCTEANPIRFLLSDK
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mRNA from alignment at D-mesarthrocarpus_Contig945:2222..6920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig945.2.1 ID=mRNA_D-mesarthrocarpus_Contig945.2.1|Name=mRNA_D-mesarthrocarpus_Contig945.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4699bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig945:2222..6920+ (Discosporangium mesarthrocarpum MT17_79)
CTGAAGTGCTATCGTTGACCAGCAACAGAGTGCGAGGGGAATCGCTGCAG
CGTGAATCCTTTGCATGTACCAAGGTTAGCCCCGGAGCCAGCGTCCGTTC
TTACCAAGTCTTCCTGTTCCCTTTTCTCTTACAGGGAGATAACTGCCGGG
TCGATCTTGGGGAACACCGAAGACTGCCTCGAACGTTGTTGATTGAGATA
TACGCATATTGTCGAGGTCAATAGGATTCACGTAGGAAGTATTATAAATG
GATGATATTCCGTCGGCTTACGCGGAAAGTGCAATGATTTCTCTTATCGA
TTGTGAACTTTAGTACGTTGAGTGTGGGTACGCCACGCAAATCTGTATCC
TTAAGCCCAACCAAGAACACACGCGGATACCGAGCAGAAATCCCCCCCGC
GTCCCCCCTCTCCAGGTTCCCTGAATTTCTAGTTGTTGTTTATTGGTGGA
TCAGTAGCTTCTGGAGGTGGCACACCCAACCCTACAAGGTGGCACCACCC
CGAGTTCAACTTGGGCCCCGAGGCAAAGCCCGACATCTTCACCCATCCAA
TCGCGCAAGCACCCGAGGACCGAGGACCTGGATCTACGTGGCGTGCTTGC
AAGTTTAGAAGAGGGCTATATTGCAGGGCCATTGACAGCCCTTCAAGGTA
GGTATGACGTCGATCACTGCAGGAATAGCCGCTGCTCAGCAGTGCTATGA
AATGACCATAGTTCGAAGTGTATGGTTCTTGAGGTCGGGTAATTGAAGGC
ATGAAGCTGGCACAAAAGGACCTGGTCAAGTCCACTCTATCCCTGTCACT
GTGTTAAATAACTGCTGAAATCAGTTTCACCCGCCCCTCTAACCCCGCCC
ATTTCGGGCCATGCAAGGTAAACGTGGGGAGGGGTCTCTACCCTTCGTCA
AGAACCTCACGGTCAAACCCTCGCTGCATGCGGGAGGAAGGATGGACCGC
GGATTCGACATCATTCCTGGCCTGGTATGTCATCATTCACTTTGTTTTCC
ATACTCTAGTCTCGTTTAGTTGTATGTGAGGTGCAGTGACCCCCTGAACC
ACCTGCAGCAACCGTGGCTGTACAAGGTCATTAGAGTGTGCTATTCCAGG
ACCCAAACGCGGAGTTGTTCTAACTCTGGGTTTTTGCCTTGTGCGATTAT
GTAGGTAATGTGGTGTTTCTCTCTTCAAGGTTTGGCTTTTTTCTCGTGTG
ACTTTACCACAACAGTTTCTATCACAAAAGTATTTTTCGTCCTGTCCCTA
AACTTGTCAGGTAGCAACTTTGGAAGGCGGGAACATTGACTTGACCCAAG
GACAACAAGACACTTTTTGCAGGTGAAATGGGTCGCCAAATCTAGGCAAA
TCAGCACTCAATGTGGAGATTTGATGGTGTGGGCCAGGAGCCAGTGCTTG
TGGGCTATCCGCTTTCCCATGCTTTGCCTTGGTGTGAATGTGATATGGTT
CATGTTGATATTCGATATTCGTGGGTTTTCTCCTCTTCTAGAGTCCTGTT
CTGGTGACTTCCTGGTTGCTAGTAGGAGGTAGTTGTATGTTAGAGGTAGT
TGAATCTCCTCATGTCACTGCCACAGACAAAATCTAGGCAATACCGGCTT
CAGTTCCTCATCACTACCACACCACTATCCCCCAATTTCCCCACCCAAGG
TTCCCTCAACCTGTCATCCTATCCCTACCTCTCTTCATATGCATATTCCC
TCATATTCTCCGTCTGCAACAATGCCACCCCATACACCCATCGACTCCCT
TTGCCTTTCTCTCCTCCACTTGCTCATTACGCCGTCCATCTTTGTCCCTT
ATGTCACCCCTCCCCTCCCCTTCTGAATGAAACAATCTCCACGCACCGCA
TTGCTTGCCCCCCTGCTTCAGTAATGGCGACTCTCCACACAAGAAACAAC
ACTCCGATGGCGCCAGAGGTGAGCGCTTCCCAGCTGGTGGTAAAGAAAGC
GCTGGGCAGTCAACCTCTCGTAGAGGTCATTCAACATCAGCTGCAGCCGC
CCCTATCCCTGGTATCGTCCTTTCAGCCATCCTGAGTTTCCTGCCAGCTC
CAGAGGCAGTATCACTCATCCTACGCTCCAGGTCAAAGCAGCGACATGTG
GAGGTAGGGCGACACTGCCTCCAGCGGATGGAAACCGTCTTCCAGGGGGT
GTCCCAGGCCAAGGTGAAATTATGCACATCTGCCGCTAAGCATGGCACAC
GAGGGACAAGAAATACTGGCAGCGCAAACAAGGTCACCCTAGGGTTAGGG
TTAGAGCCGATCGCACTGGCCCTAACCCTAACCCTTTTGAAGTGCGGCAG
AGCTCTACAATAGGCTCTTTTTCAACCCTGACCATTTTCTTTTTTCTTTC
TTCATCCTTGGTGCACATACACTTCGATGAGTGAGGGGGTTCCAAGTGCA
GCAGAGCGTATTGGTTATGCTTGTTGGTTTGTGTCCCCTTGCATGCGCAC
ACATCGGCATAGAACCCATACAAGTGCAACATTGGCATAGGAGCCATACT
AGTGCAGTCCACCCCTGGCATAGCCCATTGTTGTTGTTGTCATCAAGAGG
ATGTACTGACAAGCTTGAGGACAAGAATAAGAAAGTTTCTTTGGCATGAT
ATCCCTCAATACATCTGGTTTTGTGGAGTTTTTTTGTTTGTTTTGTTTGA
TCTTTGCTTGTCTTGTGATCGATTGGTTGGTTGATTGATTGGTTAATTGA
TTGATTTGCCTCCACTTCTTTTTTGCCAATCATTTTTCCTTTTGTGCATG
CGGGAATAAAGGCAAGCCAAGGAACAAAGGATCAATTGCTGGCAGAATGT
GTTCAGCCTCCACTTCTGCACCCCCTGCACCCAAGGTACAGCATACCCTG
GTGCAAAAAGTCAGTGCTCTTTCATGTGTCCCTGCTGCTTATTTCTCTTA
CAACTCTGAGGTTCTCAAAACTGTATTCTTTAAAAAAGTCAGTAAATTCT
CCAGCGCGAATGTTTGTTCATTGATGTGGGGGGTAGATGGGTTAGGGTTA
GGGTTAGGGTTTCAGAAATGCAGGAAGTACCTCAGTCCATGCTGACTAAA
ATGGATGGTGCCGACCCCACCACCCATGACCCTTAACTAATCATGAACAC
CCATTCAGCTACCAAGATTCCGAGCTTAACAGCGGAGGTGACAGAGAGTT
TTTTTCTGACCTGATCGCCTCCTTGCCTAACCCCAACTCTAACCCTAGAG
CAGCACATCACGAGTTGTCCCAGACAAATGAATATTGGAACGTCCACAAG
AGTTAAATCAATTCACATTTTGGAAGTGCATTGATACCTCTACCTCTAGA
GACTCTTAACTCTTTCCTCTGCTTGTCAGAGAAAAGAGCACGACAAATGC
CCTTCCTCCCTACTCCTCCTTGGTATCCCCCTCGGGTACCCCTTGACCTC
ACTCCAAACAAAGGCCGCCAAGCACCCTGAACCTTGGCGATATGGAGCAA
CTTGACCTCATTTTCAAGGTGTCACACGCCCACGTGACTGGTCACTACCC
TACCAGCCACCAAACGTCCGACTCCAAGGGCCCTGGCAGCAACAAGAGTT
GTAGTTTCAAGAACTCTCAAGGTTTGATGTGTCCGGAATTGAAGCCAGTC
CGAGGTCAAGAAGGGAGCGGGAGGCTGGAGACAGGGGGAGACAGGGATGG
GGGAAGGGCTGACAAGGCAACCAAACGCCTCAGCGAACAATGCCATGGCC
TACTCAGTATTCTCGCTGCTGTGACGCACAGGTTTCTCCTCAACGCGCCA
GGTGTCAACTTCAGGTGGGGGACTGATCCAGACCTTGATGACAGTTAGTT
TCTTTGTTCTCAGGAGGGGAAAATGGGGGGCAGAGGGAGAGAGCTAAGGA
TTGGGGTTATTGTACAGGAAGCTAATACCCTTCATGCCTTTGGGGTGAGC
CCCTGCTCTGGGCTTGTTTTTCTTTACCTTCTACATTCTCCTCTTTGTGC
ACTAGTTTCTTGGTACCACACATTCCCCAGACAAGCCCCAATATTCCCCA
GCGCCCACACCATACAAAACCTCTCCCTGTTACAGACCCCCTTCCCCCCC
CTGGCTTCCAAATTGTCATCGTTCTTGCATGCGCCTCCCACCCCCTGATG
GCATCATGCACCATGCAGCAATGTTGGCATCCTGACAGATTGCCTGCACC
CTGGCCAGCTGAACCATGTGGTGGACTTTGGTGACTCTGTTGCCAGTCAC
GGCATGCATGAGATGGACACCTTTCCACTTGCTGTCGTGAGCGGGTGGGT
GGATGTGTGGGTGGGTGGGCAGGCAAGCAGGTACTGCAAGTAAAGTGCGA
AACCCAGATCTCCAACCACAGAGCCCTAGAGCTCCAGGGCAGGGCTCGTC
AAGGAGGGTGTGGCTTTTCTCTGTGATTGGTAGCAGCTGCTGCCCCCTGC
TCCCTCATCAGCAGGCACAGGGCACACCTCTGCCTCATGCCCTTCAAGGG
TGAACCACCCTCATTTTCCTGGTCCACCCTTGGTCCTGCTGTGCCTGTGC
AGGACCGAACTTGGGAGACATTCCCATGCCTTCAGTCGAAACACTAACTA
TTGTACAATCATCCCTCTCCGGTGCCCTTTGTCTGGCCTTTGGGATCTTC
CCTTCCGCCAGGGTGTGCGTGTTGGATTTGAGGAGCCCCGTGTATGTTTG
CCTACCTTGCACAGAGGCGAACCCCATCCGCTTTCTTCTTTCTGACAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig945:2222..6920+

>mRNA_D-mesarthrocarpus_Contig945.2.1 ID=mRNA_D-mesarthrocarpus_Contig945.2.1|Name=mRNA_D-mesarthrocarpus_Contig945.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1026bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig945:2222..6920+ (Discosporangium mesarthrocarpum MT17_79)
ATGGACCGCGGATTCGACATCATTCCTGGCCTGGTAGCAACTTTGGAAGG
CGGGAACATTGACTTGACCCAAGGACAACAAGACACTTTTTGCAGTAATG
GCGACTCTCCACACAAGAAACAACACTCCGATGGCGCCAGAGGTGAGCGC
TTCCCAGCTGGTGGTAAAGAAAGCGCTGGGCAGTCAACCTCTCGTAGAGG
TCATTCAACATCAGCTGCAGCCGCCCCTATCCCTGGTATCGTCCTTTCAG
CCATCCTGAGTTTCCTGCCAGCTCCAGAGGCAGTATCACTCATCCTACGC
TCCAGGTCAAAGCAGCGACATGTGGAGGTAGGGCGACACTGCCTCCAGCG
GATGGAAACCGTCTTCCAGGGGGTGTCCCAGGCCAAGGCAAGCCAAGGAA
CAAAGGATCAATTGCTGGCAGAATGTGTTCAGCCTCCACTTCTGCACCCC
CTGCACCCAAGGCCGCCAAGCACCCTGAACCTTGGCGATATGGAGCAACT
TGACCTCATTTTCAAGGTGTCACACGCCCACGTGACTGGTCACTACCCTA
CCAGCCACCAAACGTCCGACTCCAAGGGCCCTGGCAGCAACAAGAGTTGT
AGTTTCAAGAACTCTCAAGGTTTGATGTGTCCGGAATTGAAGCCAGTCCG
AGGTCAAGAAGGGAGCGGGAGGCTGGAGACAGGGGGAGACAGGGATGGGG
GAAGGGCTGACAAGGCAACCAAACGCCTCAGCGAACAATGCCATGGCCTA
CTCAGTATTCTCGCTGCTGTGACGCACAGGTTTCTCCTCAACGCGCCAGG
TGTCAACTTCAGCAATGTTGGCATCCTGACAGATTGCCTGCACCCTGGCC
AGCTGAACCATGTGGTGGACTTTGGTGACTCTGTTGCCAGTCACGGCATG
CATGAGATGGACACCTTTCCACTTGCTGTCGTGAGCGGGGTGTGCGTGTT
GGATTTGAGGAGCCCCGTGTATGTTTGCCTACCTTGCACAGAGGCGAACC
CCATCCGCTTTCTTCTTTCTGACAAG
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