mRNA_D-mesarthrocarpus_Contig9444.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9444.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig9444.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E1ZMB4_9GAMM (Probable membrane transporter protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E1ZMB4_9GAMM)

HSP 1 Score: 354 bits (908), Expect = 1.050e-120
Identity = 190/260 (73.08%), Postives = 218/260 (83.85%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYS 780
            M+FLLYILAGA VGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYA++TKAG A+SHHR G+VDW+IVGLLAAGSIPVS+LL+   ++ SFQE+ EFE+LLTFSLGIMLI+TA ILIFR+ +R  A+EE+P   M  IHR R T T+ MGLLLGACVTLSSVGAGAFGAAIL+T+Y+QTSA +IIGTDIAHAVPLT  AGLGYL++GYVD+MLL+SLL+GSLPA HLGS+ S              LLL LGI YS
Sbjct:    1 MDFLLYILAGAAVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYAAITKAGGAISHHRRGNVDWKIVGLLAAGSIPVSILLHTFFLDISFQESPEFESLLTFSLGIMLIVTATILIFRDKIRLSAVEEKPEFFMHTIHRSRSTVTFLMGLLLGACVTLSSVGAGAFGAAILMTIYSQTSAAKIIGTDIAHAVPLTFIAGLGYLSSGYVDLMLLVSLLIGSLPAIHLGSKASNQVPDKVLQQILVVLLLGLGIXYS 260          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E9F214_9CHLR (Probable membrane transporter protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9F214_9CHLR)

HSP 1 Score: 345 bits (884), Expect = 4.670e-117
Identity = 179/261 (68.58%), Postives = 216/261 (82.76%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSV 783
            MEFLL+ILAGA VGFAIGLTGVGGGSLMTPLLL FGYPAPVAIGTDLLYA++TK G A++HHR G+V+W IV +LAAGSIPVS+LL++L ++SSFQE+ EFE LLTFSLG+MLI+TA+ILIFR+ +R+ AIEE+P   M  IH+HR   TW MGLLLG CVTLSSVGAGAFGAAIL+T+Y Q S V++IGTDIAHAVPLT  AG+GYL  G+VD++LL+SLL+GSLPA ++GSR S            T +LL LG+YYS+
Sbjct:    1 MEFLLHILAGAAVGFAIGLTGVGGGSLMTPLLLAFGYPAPVAIGTDLLYAAITKFGGAITHHRQGNVNWNIVLILAAGSIPVSILLHVLFLDSSFQESPEFEGLLTFSLGVMLIVTAMILIFRDKMRKNAIEEKPEFFMHSIHKHRSAVTWIMGLLLGVCVTLSSVGAGAFGAAILMTIYTQISPVKVIGTDIAHAVPLTFIAGIGYLFGGFVDMVLLVSLLIGSLPAIYVGSRASSRVPDKVLQKILTIILLGLGVYYSL 261          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E9JD76_9GAMM (Probable membrane transporter protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JD76_9GAMM)

HSP 1 Score: 342 bits (876), Expect = 7.700e-116
Identity = 185/259 (71.43%), Postives = 216/259 (83.40%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYY 777
            MEF+L+ILAGA VGFAIGL+GVGGGSLMTPLLLLFGY APVAIGTDLLYA++TKAG A+SHHR G+VDW+IV LLA+GSIPVS+LL+  L+NS+FQE+ EFE LLT SLG+MLI TAIILIF++ +R  A+EE+P   MQ +HR+R   T  MGLLLG CVTLSSVGAGAFGAAILL +Y+QT+AVRIIGTDIAHAVPLT  AGLGYL AGYVD+MLL+SLL+GSLPA H+GSR+S            T +LLSLG YY
Sbjct:    1 MEFVLHILAGAVVGFAIGLSGVGGGSLMTPLLLLFGYSAPVAIGTDLLYAAITKAGGALSHHRRGNVDWKIVLLLASGSIPVSILLHGTLLNSAFQESPEFEELLTLSLGVMLITTAIILIFKDKMRSSAVEEKPEFFMQPVHRYRAAVTLVMGLLLGVCVTLSSVGAGAFGAAILLMIYSQTTAVRIIGTDIAHAVPLTFIAGLGYLLAGYVDLMLLVSLLLGSLPAIHVGSRISNQVPDRYLLTLLTAILLSLGFYY 259          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E1Z9Z0_9GAMM (Probable membrane transporter protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E1Z9Z0_9GAMM)

HSP 1 Score: 338 bits (867), Expect = 1.930e-114
Identity = 183/261 (70.11%), Postives = 212/261 (81.23%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSV 783
            MEFLL+I+AGA VGFAIGLTGVGGGSLMTPLLL+FGYPAPVAIGTDLLYAS+TKAG A +HHR G+VDW+IV  LA GSIPVS+LL++L++N  FQ++ +FE LLT SLG+MLI+TAIILI R+ +R  AIE +P  LM  IHRHR   TW MG LLG CVTLSSVGAGAFGAAILLT+Y+Q  A RIIGTDIAHAVPLT  AG+GYL AGYV++ LL SLL+GSLPA HLGSR+S            T +LLSLGIYYS+
Sbjct:    1 MEFLLHIIAGASVGFAIGLTGVGGGSLMTPLLLVFGYPAPVAIGTDLLYASITKAGGAFAHHRMGNVDWKIVFTLALGSIPVSILLHMLVLNXQFQDSAQFEELLTXSLGLMLIVTAIILIIRDKMRSNAIEGKPNFLMPVIHRHRSLVTWVMGGLLGVCVTLSSVGAGAFGAAILLTIYSQIPAARIIGTDIAHAVPLTFIAGIGYLLAGYVNLPLLGSLLIGSLPAIHLGSRLSSQVPERLLLQILTIILLSLGIYYSL 261          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E4JZV1_9GAMM (Probable membrane transporter protein n=4 Tax=root TaxID=1 RepID=A0A2E4JZV1_9GAMM)

HSP 1 Score: 328 bits (842), Expect = 1.140e-110
Identity = 172/261 (65.90%), Postives = 212/261 (81.23%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSV 783
            MEFLL+I+AGA VGFAIGLTGVGGGSLMTPLLL+FGYP PVAIGTDLLYA++TKAG A++HHR G+VDW+IV +L  GSIP+S+ L+  ++N  FQE+ +FE LLT SLGIMLI+T+IILI R  +R  AIE +P+  M  IHR+R +AT  MGL+LG CVT+SSVGAGAFGAAILLT+Y+Q +AVR+IGTD+AHAVPLT  AG+GYL AGYVD+MLL  L+VGSLPA H+G+R+S            T +LLSLG+YY+V
Sbjct:    1 MEFLLHIVAGASVGFAIGLTGVGGGSLMTPLLLVFGYPPPVAIGTDLLYAAITKAGGALAHHRQGNVDWKIVSILGLGSIPISIFLHTFVLNVEFQESAQFEELLTLSLGIMLIVTSIILILRNKMRINAIEGKPKLFMPAIHRYRTSATLLMGLILGFCVTVSSVGAGAFGAAILLTIYSQITAVRVIGTDLAHAVPLTFIAGVGYLFAGYVDLMLLFGLIVGSLPAIHIGTRLSSQVPDKVLVQVLTVILLSLGVYYTV 261          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E9ZFP1_9GAMM (Probable membrane transporter protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9ZFP1_9GAMM)

HSP 1 Score: 327 bits (837), Expect = 6.530e-110
Identity = 176/261 (67.43%), Postives = 209/261 (80.08%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSV 783
            MEF+L++LAGAGVGF IGLTGVGGGSLMTP+LLLF YPAPVAIGTDLLYA++TKA  AVSHHRA +VDW+IVGLLA GSIP+SLLL+I  +++ F+ + E E LLT+SLGIMLI+TAIILI R  LR+ AIE+RP  +M+ IH HR   TW MG++LG CVTLSSVGAGAFGAAILL +Y+QT AVRIIGTDIAHAVPLT  AG+GY  +GYVD+ LL SLL+GSLP  HLGS+++              LLL LG YYS+
Sbjct:    1 MEFILHVLAGAGVGFTIGLTGVGGGSLMTPILLLFQYPAPVAIGTDLLYAAITKASGAVSHHRATNVDWKIVGLLALGSIPISLLLHICFLDARFEGSNEGERLLTYSLGIMLIVTAIILILRNKLRKGAIEDRPALIMKAIHHHRGPMTWLMGVVLGFCVTLSSVGAGAFGAAILLVIYSQTPAVRIIGTDIAHAVPLTFVAGMGYFFSGYVDLALLASLLLGSLPTIHLGSKLAARVQDKTLQRLLILLLLGLGGYYSL 261          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2A5B4Y1_9GAMM (Probable membrane transporter protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A5B4Y1_9GAMM)

HSP 1 Score: 320 bits (819), Expect = 4.070e-107
Identity = 170/265 (64.15%), Postives = 212/265 (80.00%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSVLKPL 795
            ME LL+I AGA VGFAIGLTGVGGGSLMTP+LLLFGYPAPVAIGTDLLYA++TKA  A+SHHR G+V+W+IV LLA GSIP ++L+++LL+++ FQ+++ FENLLT SLG+MLI T+IILIF+  LR+ A+++RP  +M  +HR+R   TW MG+LLG CVTLSS+GAGAFGAAILL +Y++TSAVRIIG+DIAHAVPLT  AG GY  AG+VD+ LLLSLL+GSLPA   G+RVS              +LLS+G YYS+   L
Sbjct:    1 MELLLHISAGAVVGFAIGLTGVGGGSLMTPILLLFGYPAPVAIGTDLLYAAITKANGAISHHRRGNVNWKIVSLLALGSIPSAILVHLLLLDTGFQQSQLFENLLTRSLGVMLITTSIILIFKGKLRKNAVDDRPEFIMGVVHRNRGFITWLMGILLGVCVTLSSIGAGAFGAAILLVIYSKTSAVRIIGSDIAHAVPLTFIAGAGYFVAGFVDMSLLLSLLLGSLPAISFGTRVSSRVSERTLQKILIVILLSMGCYYSIFSVL 265          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A7C7TSI7_9GAMM (Probable membrane transporter protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7TSI7_9GAMM)

HSP 1 Score: 319 bits (818), Expect = 5.040e-107
Identity = 170/259 (65.64%), Postives = 204/259 (78.76%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYY 777
            MEFLL+ILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAP+AIGTDLLYA++TKAG A+SHHR G+VDW+IV  LA GSIP S+LL+   ++ +FQE+E FE LLT SLG+ML +TAI+LIFR  +R +AIEERP  +M+ +H+ R   TW MGLLLG CVTLSSVGAGAFGAA+L+ +Y+QT++VR+IGTDIAHAVPLTL AGLGYL  GYVD++LL           HLG++VS            T LLL LG+YY
Sbjct:    1 MEFLLHILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPIAIGTDLLYAAITKAGGAISHHRQGNVDWQIVVTLALGSIPASILLHYFFLDQNFQESELFEKLLTISLGVMLTVTAIVLIFRNKMRLKAIEERPELVMKLVHKRRGVITWVMGLLLGICVTLSSVGAGAFGAAVLMVIYSQTTSVRVIGTDIAHAVPLTLIAGLGYLLIGYVDLVLLGXXXXXXXXXXHLGTKVSSQVPDKSLQTILTILLLGLGMYY 259          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2A4X283_9GAMM (Probable membrane transporter protein n=1 Tax=SAR86 cluster bacterium TaxID=2030880 RepID=A0A2A4X283_9GAMM)

HSP 1 Score: 318 bits (814), Expect = 2.340e-106
Identity = 173/265 (65.28%), Postives = 208/265 (78.49%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSVLKPL 795
            ME +L+I AGA VGFAIG+TGVGGGSLMTPLLLLFGYPAPVAIGTDLLYA++TKAG A+SHHRA +VDW IV LLA GS+P ++L++  +  ++FQE+  F  LLTFSLG+MLI+TAIILI R  LR++A+E +P  LM  I R R   T+ MG++LG CVTLSSVGAGAF AAILLT+Y+QT  V+IIG+DIAHAVPLT  AGLGYL AGYVD+MLLLSLL+GSLPA  LGSR+S            T +LL LG+YY+V   L
Sbjct:    1 MELILHISAGALVGFAIGITGVGGGSLMTPLLLLFGYPAPVAIGTDLLYAAITKAGGALSHHRAANVDWSIVRLLALGSVPTAVLVHAAISQTTFQESPRFGELLTFSLGVMLIITAIILILRNKLREKAVENKPPFLMNFIQRRRSGLTFLMGIVLGVCVTLSSVGAGAFAAAILLTIYSQTRTVKIIGSDIAHAVPLTFIAGLGYLFAGYVDLMLLLSLLIGSLPAIALGSRLSNRVPEKTLQGLLTVILLGLGLYYTVFNKL 265          
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Match: A0A2E4LJN4_9GAMM (Probable membrane transporter protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4LJN4_9GAMM)

HSP 1 Score: 312 bits (799), Expect = 3.750e-104
Identity = 168/261 (64.37%), Postives = 206/261 (78.93%), Query Frame = 1
Query:    1 MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYASLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEEFENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTATWCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLTLFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSXXXXXXXXXXXXTFLLLSLGIYYSV 783
            M+F L+ILAGA VGFAIG+TGVGGGSLMTPLLL+FGYPAPVAIGTDLLYA++TKA  A +HHR G+VDW+IV LLA+GSIPVS+ L+I  ++  FQ + +FE L T SLG+ML++T+IILIF++ +R+++IEE P  LM  +HR R T TW MGLLLG CVTLSSVGAGAFGAAIL T+Y+Q S V IIGTDIAHAVPLT  AGLGYL +G+VD  LL+SLL+GSLPA H GS+VS              +L +LG+ YS+
Sbjct:    1 MDFFLHILAGASVGFAIGVTGVGGGSLMTPLLLVFGYPAPVAIGTDLLYAAITKANGAYAHHRRGNVDWKIVILLASGSIPVSICLHIFFLDIXFQNSPQFEELXTKSLGMMLVVTSIILIFKDYIRKKSIEEIPGFLMIPLHRQRSTITWVMGLLLGICVTLSSVGAGAFGAAILXTIYSQKSVVXIIGTDIAHAVPLTFIAGLGYLFSGFVDSXLLVSLLIGSLPAXHXGSKVSTKVPDKILQRVLAVILFTLGVIYSL 261          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9444.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E1ZMB4_9GAMM1.050e-12073.08Probable membrane transporter protein n=2 Tax=Gamm... [more]
A0A2E9F214_9CHLR4.670e-11768.58Probable membrane transporter protein n=1 Tax=Deha... [more]
A0A2E9JD76_9GAMM7.700e-11671.43Probable membrane transporter protein n=2 Tax=Gamm... [more]
A0A2E1Z9Z0_9GAMM1.930e-11470.11Probable membrane transporter protein n=1 Tax=Gamm... [more]
A0A2E4JZV1_9GAMM1.140e-11065.90Probable membrane transporter protein n=4 Tax=root... [more]
A0A2E9ZFP1_9GAMM6.530e-11067.43Probable membrane transporter protein n=2 Tax=Gamm... [more]
A0A2A5B4Y1_9GAMM4.070e-10764.15Probable membrane transporter protein n=1 Tax=SAR8... [more]
A0A7C7TSI7_9GAMM5.040e-10765.64Probable membrane transporter protein n=1 Tax=Gamm... [more]
A0A2A4X283_9GAMM2.340e-10665.28Probable membrane transporter protein n=1 Tax=SAR8... [more]
A0A2E4LJN4_9GAMM3.750e-10464.37Probable membrane transporter protein n=1 Tax=Gamm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9444contigD-mesarthrocarpus_Contig9444:3435..4235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121935.AQXX01000128_gene1911
PFAMsTauE
Model size801
Max annot lvl135619|Oceanospirillales
KEGG koko:K07090
Hectar predicted targeting categorysignal peptide
Exons1
Evalue3.07e-77
EggNOG OGsCOG0730@1|root,COG0730@2|Bacteria,1MWX2@1224|Proteobacteria,1S2BC@1236|Gammaproteobacteria,1XIRS@135619|Oceanospirillales
Descriptionmembrane transporter protein
Cds size801
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791098.5824335-CDS-D-mesarthrocarpus_Contig9444:3434..42351680791098.5824335-CDS-D-mesarthrocarpus_Contig9444:3434..4235Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9444 3435..4235 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9444.4.1prot_D-mesarthrocarpus_Contig9444.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9444 3435..4235 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9444.4.1

>prot_D-mesarthrocarpus_Contig9444.4.1 ID=prot_D-mesarthrocarpus_Contig9444.4.1|Name=mRNA_D-mesarthrocarpus_Contig9444.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=267bp
MEFLLYILAGAGVGFAIGLTGVGGGSLMTPLLLLFGYPAPVAIGTDLLYA
SLTKAGSAVSHHRAGSVDWRIVGLLAAGSIPVSLLLNILLVNSSFQETEE
FENLLTFSLGIMLILTAIILIFRENLRQRAIEERPRRLMQGIHRHRQTAT
WCMGLLLGACVTLSSVGAGAFGAAILLTLYAQTSAVRIIGTDIAHAVPLT
LFAGLGYLAAGYVDVMLLLSLLVGSLPATHLGSRVSNRVPDRILQRLLTF
LLLSLGIYYSVLKPLL*
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mRNA from alignment at D-mesarthrocarpus_Contig9444:3435..4235-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9444.4.1 ID=mRNA_D-mesarthrocarpus_Contig9444.4.1|Name=mRNA_D-mesarthrocarpus_Contig9444.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=801bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9444:3435..4235- (Discosporangium mesarthrocarpum MT17_79)
ATGGAATTTCTGCTCTACATTCTCGCCGGAGCCGGAGTCGGTTTTGCTAT TGGCCTGACTGGCGTCGGCGGAGGCTCGCTAATGACTCCCCTGCTGCTGC TGTTCGGCTATCCGGCCCCGGTAGCCATTGGTACCGACCTGCTCTACGCC TCACTTACCAAGGCTGGCAGCGCGGTGTCCCACCACCGGGCCGGTAGTGT GGACTGGCGTATTGTTGGGCTGCTTGCCGCCGGCAGTATTCCGGTGTCTC TGCTGCTCAATATCCTGCTGGTGAATTCCAGCTTTCAGGAAACCGAGGAA TTCGAAAACCTGCTCACCTTCAGCCTCGGTATTATGTTAATTCTCACCGC TATAATACTGATATTCAGGGAAAATCTACGCCAGCGGGCAATTGAGGAGC GGCCGCGCAGACTGATGCAGGGCATTCACCGCCATCGGCAGACTGCCACC TGGTGCATGGGGCTATTACTCGGGGCCTGCGTGACCCTGTCATCGGTGGG CGCGGGCGCGTTTGGCGCGGCGATTCTGTTGACCCTGTATGCCCAGACCA GCGCGGTGCGGATTATTGGCACGGATATCGCGCATGCAGTCCCGCTCACC CTGTTTGCCGGATTGGGCTACCTGGCGGCGGGTTATGTGGACGTAATGCT GCTGCTCAGCTTGCTGGTCGGGTCGCTGCCGGCAACCCATCTTGGATCCA GGGTCAGCAACCGGGTCCCGGATCGCATCCTGCAGCGCCTGCTGACGTTC CTGTTACTCAGCCTGGGAATCTACTACAGCGTTCTTAAACCACTGTTATA G
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9444:3435..4235-

>mRNA_D-mesarthrocarpus_Contig9444.4.1 ID=mRNA_D-mesarthrocarpus_Contig9444.4.1|Name=mRNA_D-mesarthrocarpus_Contig9444.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=801bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9444:3435..4235- (Discosporangium mesarthrocarpum MT17_79)
ATGGAATTTCTGCTCTACATTCTCGCCGGAGCCGGAGTCGGTTTTGCTAT
TGGCCTGACTGGCGTCGGCGGAGGCTCGCTAATGACTCCCCTGCTGCTGC
TGTTCGGCTATCCGGCCCCGGTAGCCATTGGTACCGACCTGCTCTACGCC
TCACTTACCAAGGCTGGCAGCGCGGTGTCCCACCACCGGGCCGGTAGTGT
GGACTGGCGTATTGTTGGGCTGCTTGCCGCCGGCAGTATTCCGGTGTCTC
TGCTGCTCAATATCCTGCTGGTGAATTCCAGCTTTCAGGAAACCGAGGAA
TTCGAAAACCTGCTCACCTTCAGCCTCGGTATTATGTTAATTCTCACCGC
TATAATACTGATATTCAGGGAAAATCTACGCCAGCGGGCAATTGAGGAGC
GGCCGCGCAGACTGATGCAGGGCATTCACCGCCATCGGCAGACTGCCACC
TGGTGCATGGGGCTATTACTCGGGGCCTGCGTGACCCTGTCATCGGTGGG
CGCGGGCGCGTTTGGCGCGGCGATTCTGTTGACCCTGTATGCCCAGACCA
GCGCGGTGCGGATTATTGGCACGGATATCGCGCATGCAGTCCCGCTCACC
CTGTTTGCCGGATTGGGCTACCTGGCGGCGGGTTATGTGGACGTAATGCT
GCTGCTCAGCTTGCTGGTCGGGTCGCTGCCGGCAACCCATCTTGGATCCA
GGGTCAGCAACCGGGTCCCGGATCGCATCCTGCAGCGCCTGCTGACGTTC
CTGTTACTCAGCCTGGGAATCTACTACAGCGTTCTTAAACCACTGTTATA
G
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