mRNA_D-mesarthrocarpus_Contig943.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig943.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig943.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: A0A2E3UKY1_9RHOB (2OG-Fe(II) oxygenase n=2 Tax=Actibacterium TaxID=1433986 RepID=A0A2E3UKY1_9RHOB)

HSP 1 Score: 94.4 bits (233), Expect = 3.320e-21
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            Q+CPGK++     T V P  G +T  IG + M   + +LLSTLH VRMP P EY+G  Y IA FCQG+TDT I+GP+K Y PIT+ ++I
Sbjct:  231 QLCPGKEADELAWTDVPPLPGIVTCNIGDMLMRWSDDKLLSTLHRVRMPKPGEYMGPRYSIAFFCQGNTDTVIEGPQKRYAPITAKDYI 319          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: UPI001C67BB30 (isopenicillin N synthase family oxygenase n=1 Tax=Neiella holothuriorum TaxID=2870530 RepID=UPI001C67BB30)

HSP 1 Score: 90.9 bits (224), Expect = 6.710e-20
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVCPGK++SS + TPV+P+ G +T  IG + M   + +L STLH VRMP PKEY G  Y IA FCQ + D  IQGP   Y  I++ +++
Sbjct:  230 QVCPGKEASSQQWTPVEPQTGLVTCNIGDMLMRWSDDQLKSTLHRVRMPTPKEYQGARYSIAFFCQANKDVMIQGPLGKYPAISADDYL 318          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: A0A2G1QIT1_9HYPH (2OG-Fe(II) oxygenase n=3 Tax=Phyllobacteriaceae TaxID=69277 RepID=A0A2G1QIT1_9HYPH)

HSP 1 Score: 88.2 bits (217), Expect = 6.970e-19
Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVCPGKD  +   T V+P  G IT  IG + M   + +L STLH VRMP   EYLG  Y +  FCQ + D  IQGP+KTY PIT+ +++
Sbjct:  235 QVCPGKDHDTHAWTDVEPAEGVITCNIGDMLMRWSDDQLQSTLHRVRMPRADEYLGPRYSLPFFCQANKDAVIQGPKKTYPPITAHDYL 323          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: UPI001C68A7DE (isopenicillin N synthase family oxygenase n=1 Tax=Actinomadura sp. PM05-2 TaxID=2864039 RepID=UPI001C68A7DE)

HSP 1 Score: 76.3 bits (186), Expect = 1.740e-14
Identity = 37/89 (41.57%), Postives = 52/89 (58.43%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVCPG++ ++ E TP++P    +T  IG + M   + RL S  H VR P P E  G  Y +A F Q + D  I+ P  TY PIT+G++I
Sbjct:  226 QVCPGREMTAQEWTPIEPSEDAVTCNIGDMLMRWSDDRLPSNFHRVRSPGPDEDQGPRYSVAFFAQANKDVLIESPAGTYPPITAGDYI 314          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: UPI0002E62F62 (isopenicillin N synthase family oxygenase n=1 Tax=Nocardia vinacea TaxID=96468 RepID=UPI0002E62F62)

HSP 1 Score: 73.9 bits (180), Expect = 1.250e-13
Identity = 37/89 (41.57%), Postives = 48/89 (53.93%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVCPGK+    + T + P    IT  IG +     +  L S  H VR P   EY G+ Y IA F Q D D  IQGP +TY P+T+ +F+
Sbjct:  230 QVCPGKEMHEQQWTSITPSSALITCNIGDMLTRWSDDELPSNFHRVRSPGTGEYQGDRYSIAYFAQADRDAVIQGPRRTYPPVTAADFL 318          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: UPI001AE78A9B (isopenicillin N synthase family oxygenase n=1 Tax=Nocardia goodfellowii TaxID=882446 RepID=UPI001AE78A9B)

HSP 1 Score: 73.6 bits (179), Expect = 1.720e-13
Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVCPG++    E T + P    IT  IG +     +  L S  H VR P   EY GE Y IA F Q D D  IQGP +TY P+T+ +F+
Sbjct:  229 QVCPGREMRDQEWTSITPSSSLITCNIGDMLTRWSDDLLPSNFHRVRSPGAGEYQGERYSIAYFAQADRDAVIQGPGRTYPPVTAADFL 317          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: A0A2N7TV79_9GAMM (2OG-Fe(II) oxygenase n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7TV79_9GAMM)

HSP 1 Score: 69.3 bits (168), Expect = 6.300e-12
Identity = 39/93 (41.94%), Postives = 52/93 (55.91%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TP----VQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVCPG + +  +  P    V P    IT  IG + M   +  L STLH VRMP P+E     Y +A FCQ + D  IQGP +TY PIT+ +++
Sbjct:  231 QVCPGHEVAGSDEGPAWSSVVPRDDIITCNIGDMLMRWSDDALKSTLHRVRMPTPEEADKPRYSMAFFCQANKDVTIQGPLRTYPPITAHDYL 323          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: UPI00105B997C (isopenicillin N synthase family oxygenase n=1 Tax=Paraglaciecola marina TaxID=2500157 RepID=UPI00105B997C)

HSP 1 Score: 62.0 bits (149), Expect = 2.660e-9
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGD-ITAKIGIIPMCRGNGRLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            QVC GKD+S  +       + D IT  IG + M   + +L STLH VRMP   E     + +A FCQ + +  IQGP+KTY PI++ +++
Sbjct:  236 QVCAGKDASIHQSWCEVEALDDVITCNIGDMLMRWSDDQLKSTLHRVRMPHKGEKKNPRHSMAFFCQANKNVTIQGPKKTYPPISAEDYL 325          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: A0A1Y2F102_9BASI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2F102_9BASI)

HSP 1 Score: 55.8 bits (133), Expect = 4.290e-7
Identity = 35/96 (36.46%), Postives = 48/96 (50.00%), Query Frame = 1
Query:    1 QVCPGKDSSSG-----E*TPVQPEVGDITAKIGIIPMCRGNGRLLSTLH*VRMPCPK--EYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            +VCPG+  S+      + TP++   G I   IG   M   + +L ST H V  P  K  +Y+G+ Y I  F Q      +QGP K+Y PIT   FI
Sbjct:  215 EVCPGRSISTDFGYGDKWTPIKITEGAIVCNIGDQLMRWSDDKLKSTFHRVTAPSLKRGDYMGDRYSIGFFNQARKSANMQGPLKSYPPITGAEFI 310          
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Match: A0A0G4FPI0_VITBC (Fe2OG dioxygenase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FPI0_VITBC)

HSP 1 Score: 54.7 bits (130), Expect = 1.090e-6
Identity = 37/103 (35.92%), Postives = 50/103 (48.54%), Query Frame = 1
Query:    1 QVCPGKDSSSGE*TPVQPEVGDITAK-IGIIPM----CRGNG---------RLLSTLH*VRMPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI 267
            +VCPG    S      Q + G    + IG+ PM    C   G         +L ST H VR+P   E  G  Y +  F Q + D+ IQGP +TY PI++G+FI
Sbjct:  241 RVCPGMSVLSQSNQQQQQQGGTKELQWIGVEPMRDAICVNIGDSLKGWSDDQLQSTFHRVRLPREGECTGPRYSMVYFAQANKDSIIQGPNRTYPPISAGDFI 343          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig943.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2E3UKY1_9RHOB3.320e-2151.692OG-Fe(II) oxygenase n=2 Tax=Actibacterium TaxID=1... [more]
UPI001C67BB306.710e-2049.44isopenicillin N synthase family oxygenase n=1 Tax=... [more]
A0A2G1QIT1_9HYPH6.970e-1949.442OG-Fe(II) oxygenase n=3 Tax=Phyllobacteriaceae Ta... [more]
UPI001C68A7DE1.740e-1441.57isopenicillin N synthase family oxygenase n=1 Tax=... [more]
UPI0002E62F621.250e-1341.57isopenicillin N synthase family oxygenase n=1 Tax=... [more]
UPI001AE78A9B1.720e-1342.70isopenicillin N synthase family oxygenase n=1 Tax=... [more]
A0A2N7TV79_9GAMM6.300e-1241.942OG-Fe(II) oxygenase n=1 Tax=Halomonas endophytica... [more]
UPI00105B997C2.660e-940.00isopenicillin N synthase family oxygenase n=1 Tax=... [more]
A0A1Y2F102_9BASI4.290e-736.46Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A0G4FPI0_VITBC1.090e-635.92Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig943contigD-mesarthrocarpus_Contig943:8395..8661 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1469613.JT55_01560
PFAMs2OG-FeII_Oxy,DIOX_N
Model size267
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue8.82e-11
EggNOG OGsCOG3491@1|root,COG3491@2|Bacteria,1MUNT@1224|Proteobacteria,2TU3Y@28211|Alphaproteobacteria
DescriptionBelongs to the iron ascorbate-dependent oxidoreductase family
Cds size126
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791097.3844051-CDS-D-mesarthrocarpus_Contig943:8394..85201680791097.3844051-CDS-D-mesarthrocarpus_Contig943:8394..8520Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig943 8395..8520 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791097.3955467-UTR-D-mesarthrocarpus_Contig943:8520..86611680791097.3955467-UTR-D-mesarthrocarpus_Contig943:8520..8661Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig943 8521..8661 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig943.7.1prot_D-mesarthrocarpus_Contig943.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig943 8395..8520 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig943.7.1

>prot_D-mesarthrocarpus_Contig943.7.1 ID=prot_D-mesarthrocarpus_Contig943.7.1|Name=mRNA_D-mesarthrocarpus_Contig943.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=42bp
MPCPKEYLGEHYFIAVFCQGDTDTAIQGPEKTYKPITSGNFI
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mRNA from alignment at D-mesarthrocarpus_Contig943:8395..8661-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig943.7.1 ID=mRNA_D-mesarthrocarpus_Contig943.7.1|Name=mRNA_D-mesarthrocarpus_Contig943.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=267bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig943:8395..8661- (Discosporangium mesarthrocarpum MT17_79)
CAGGTATGCCCAGGGAAGGATTCATCTTCGGGTGAGTGAACCCCTGTGCA ACCAGAGGTGGGCGACATCACAGCAAAAATTGGGATCATTCCTATGTGCC GGGGCAATGGCCGCCTGCTGTCCACGCTTCACTGAGTACGAATGCCCTGC CCGAAGGAGTACCTTGGGGAGCACTACTTCATAGCCGTCTTCTGCCAGGG TGACACTGACACAGCTATTCAGGGGCCTGAGAAGACCTACAAGCCCATCA CCAGCGGCAATTTCATC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig943:8395..8661-

>mRNA_D-mesarthrocarpus_Contig943.7.1 ID=mRNA_D-mesarthrocarpus_Contig943.7.1|Name=mRNA_D-mesarthrocarpus_Contig943.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=126bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig943:8395..8661- (Discosporangium mesarthrocarpum MT17_79)
ATGCCCTGCCCGAAGGAGTACCTTGGGGAGCACTACTTCATAGCCGTCTT
CTGCCAGGGTGACACTGACACAGCTATTCAGGGGCCTGAGAAGACCTACA
AGCCCATCACCAGCGGCAATTTCATC
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