mRNA_D-mesarthrocarpus_Contig943.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig943.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig943.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: D7FVW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVW4_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.330e-74
Identity = 122/174 (70.11%), Postives = 144/174 (82.76%), Query Frame = 1
Query:    1 SLRMGKSE----GVDTEGNGPFTRKSLLEGAGKAAGVVGVGGFLRRGFVVGTPYSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            S+RM  S     G D +  GPFTRKSLLEG  KAAGV+G G F+++GFV G PY G+PDL+GKTAVITGGNTGLGKETA+RLAQLGADVTIACRNP+KA AA++DIK +AP AKV + PLDLASLDSV SFA+ Y+   ++LDILVNNAGVMA+PERQ+TK+G E+QFG NHLG
Sbjct:   52 SIRMASSSPADGGGDEQSTGPFTRKSLLEGVTKAAGVLGAGTFVQKGFVAGVPYHGSPDLSGKTAVITGGNTGLGKETAVRLAQLGADVTIACRNPDKAFAALDDIKAQAPGAKVGAMPLDLASLDSVGSFAKRYASSSDRLDILVNNAGVMAIPERQATKDGFEMQFGTNHLG 225          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: A0A7S1KIM2_9ALVE (Hypothetical protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KIM2_9ALVE)

HSP 1 Score: 144 bits (362), Expect = 4.560e-38
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 1
Query:    4 LRMGKSEGVDTEGNGPFTRKSLLEGAGKAAGVVGVGGFLRRGFVVGTPYSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            LRM  S+  D        R+SL++G   AA  VG+G    +  + G  YS   DL+G+  VITGGNTGLGK  A+RLA LGA VTIACR+P KA AAV+DI+  +  + V + PLDL    S++S AR  S ++ K+D+L+NNAGVMA+P R++T +G E Q GINHLG
Sbjct:   55 LRM-SSQRADAVAEANTDRRSLVKGI--AAAGVGLGLVGGKRVIDGPVYSNVVDLSGENIVITGGNTGLGKAAAVRLAALGAAVTIACRSPSKAEAAVKDIQQASGSSAVDAVPLDLTDSSSIASCARELSGRLGKIDVLMNNAGVMAIPNRETTADGYEKQMGINHLG 220          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: A0A7S0HY86_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HY86_9CRYP)

HSP 1 Score: 139 bits (351), Expect = 4.810e-37
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 1
Query:   43 NGPFTRKSLLEGAGKAAGVVGVGGFLRRGFVVGTPYSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            N  F R++  +  G  A +V     L +  + G  Y+GTPDLTG+ A++TG NTGLGKET +RLA+LGA+V +ACR+ E+   A ++I+      K+S+  LDLASL SV  FA     K EK+D+LVNNAGVMA+P R+ T +G E Q GINH G
Sbjct:   59 NAQFDRRTFGKLVGGGAALV-----LGKKVLDGGEYTGTPDLTGQVAIVTGANTGLGKETCVRLAKLGAEVVLACRSKERGEKAEQEIRALTGSNKLSTLELDLASLKSVERFAAEVQSKREKIDLLVNNAGVMAIPTREETTDGLERQIGINHFG 209          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: A0A7S2UUD6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.610e-37
Identity = 74/124 (59.68%), Postives = 88/124 (70.97%), Query Frame = 1
Query:  139 GTPYSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            G  Y   PDL+ K  VITGGNTGLGKETAIRLA LGA+V I CR P+   AA+EDIK  +   KVS+  LDLAS+    SFA+     + K+DILVNNAGVMA+PER++T EG E Q G+NHLG
Sbjct:   87 GPEYRKKPDLSDKNVVITGGNTGLGKETAIRLAGLGANVVITCRRPDTIEAAIEDIKKASKSNKVSAMTLDLASMXXXXSFAKEVKSALPKIDILVNNAGVMAIPERKTTAEGFEYQLGVNHLG 210          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: L1JAU5_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JAU5_GUITC)

HSP 1 Score: 137 bits (344), Expect = 7.250e-36
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 1
Query:   52 FTRKSLLEGAGKAAGVVGVGGFLRRGFVVGTPYSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            F R++  + AG AA +V     L +  + G  Y+GTPDLTG+ AV+TG NTGLGKET IRLA+LGA+V +A R+ E+   A ++I+      K+S+  LDLASL S+  FA     + +K+D+LVNNAGVMA+P R+ TK+G E Q GINH G
Sbjct:   10 FDRRTFGKVAGGAAALV-----LGKKVLDGGDYTGTPDLTGQVAVVTGANTGLGKETCIRLAKLGAEVVLASRSKERGEKAEKEIRALTGSDKLSTMELDLASLKSIELFASELRSRHDKIDLLVNNAGVMAIPTREETKDGLERQIGINHFG 157          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: UPI001990D8FC (SDR family oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI001990D8FC)

HSP 1 Score: 127 bits (319), Expect = 1.360e-32
Identity = 68/121 (56.20%), Postives = 89/121 (73.55%), Query Frame = 1
Query:  148 YSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            +   PD TG+TA++TG N+G+G ETA  LA+ GA+V IACRNP+K +AA+  I+  AP AKVS A LDLA LDSV+SFA  ++ + ++LD+L+ NAGVM VP    TK+G ELQ G NHLG
Sbjct:    6 FDDIPDQTGRTAIVTGANSGIGFETARMLARKGAEVIIACRNPDKGTAALARIREDAPGAKVSLAALDLADLDSVTSFAEDFAAQHDRLDLLIANAGVM-VPPSSRTKQGFELQIGTNHLG 125          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: UPI000AAFA08E (oxidoreductase n=1 Tax=Nonomuraea candida TaxID=359159 RepID=UPI000AAFA08E)

HSP 1 Score: 125 bits (313), Expect = 6.670e-32
Identity = 73/123 (59.35%), Postives = 88/123 (71.54%), Query Frame = 1
Query:  142 TPYSGTPDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            TP S  PDLTG+TAV+TG NTG+G+ TA+ LA+ GA V +A RNP K +AAVED+    P A+V    LDLA L SV  FA G    VEK+D+LVNNAGV  VP++Q TK+G ELQFG NHLG
Sbjct:    4 TPAS-MPDLTGRTAVVTGANTGIGRPTALELARHGAHVIVAARNPGKGAAAVEDVLRAVPGARVEYGRLDLADLASVREFAAG----VEKVDLLVNNAGVAMVPKQQ-TKDGFELQFGTNHLG 120          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: UPI001E2CF7B0 (oxidoreductase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2CF7B0)

HSP 1 Score: 125 bits (314), Expect = 8.100e-32
Identity = 65/117 (55.56%), Postives = 88/117 (75.21%), Query Frame = 1
Query:  160 PDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            PD TG+TA++TG N+GLG +TA RLA+ GA V +ACRNP+KA+ A+++++  AP+A V++ PLDLASLDSVS  A       ++LD+L+NNAGVMA+P R  T +G E QF  NHLG
Sbjct:   10 PDQTGRTALVTGANSGLGLQTATRLARAGATVIMACRNPDKAATALDEVRRAAPDATVTTLPLDLASLDSVSEAAERVRADHDRLDLLINNAGVMAIP-RGVTVDGFETQFATNHLG 125          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: A0A7S3GEV2_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GEV2_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 8.980e-32
Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 1
Query:  163 DLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            DLTGK  VITG NTG+GKETA  +A+ GA++ I CR+ E+A+ A++DI  + P AK+S+ PLDL  L S+ SFA  +  K +++DIL+NNAGVMA P + +TK+G ++QFG NHLG
Sbjct:   28 DLTGKIVVITGANTGIGKETARVMAKHGAEIVIGCRSEERAAGAIKDIMDENPSAKISNIPLDLGDLKSIKSFADQFLSKYDRIDILINNAGVMACP-KATTKDGFDMQFGTNHLG 142          
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Match: A0A345STF3_9ACTN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Streptacidiphilus bronchialis TaxID=2126346 RepID=A0A345STF3_9ACTN)

HSP 1 Score: 125 bits (313), Expect = 1.160e-31
Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = 1
Query:  160 PDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIKVKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPERQSTKEGNELQFGINHLG 510
            PD  G+ AV+TG N+G+G ETA RLAQ GA+V +A R+P K + AVE I    P A+VS+A LDL+ L SV+SFAR    +   LD+LVNNAG+MAVP R++T +G ELQFG NHLG
Sbjct:    8 PDQHGRLAVVTGANSGIGFETARRLAQAGAEVVLAVRDPAKGAEAVERIHAAHPAARVSAAQLDLSDLASVASFARTQLDRDRPLDLLVNNAGIMAVPSRRTTADGFELQFGTNHLG 124          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig943.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW4_ECTSI1.330e-7470.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1KIM2_9ALVE4.560e-3849.70Hypothetical protein n=2 Tax=Vitrella brassicaform... [more]
A0A7S0HY86_9CRYP4.810e-3748.72Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S2UUD6_9STRA8.610e-3759.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L1JAU5_GUITC7.250e-3649.67Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
UPI001990D8FC1.360e-3256.20SDR family oxidoreductase n=1 Tax=Deltaproteobacte... [more]
UPI000AAFA08E6.670e-3259.35oxidoreductase n=1 Tax=Nonomuraea candida TaxID=35... [more]
UPI001E2CF7B08.100e-3255.56oxidoreductase n=1 Tax=Rhabdothermincola sp. EGI L... [more]
A0A7S3GEV2_9EUKA8.980e-3254.31Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A345STF3_9ACTN1.160e-3157.26SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig943contigD-mesarthrocarpus_Contig943:173..1757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVW4
PFAMsadh_short
Model size528
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.1e-74
EggNOG OGsCOG1028@1|root,KOG1208@2759|Eukaryota
Descriptionoxidation-reduction process
Cds size519
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791097.153602-CDS-D-mesarthrocarpus_Contig943:172..3701680791097.153602-CDS-D-mesarthrocarpus_Contig943:172..370Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig943 173..370 -
1680791097.1740198-CDS-D-mesarthrocarpus_Contig943:977..11301680791097.1740198-CDS-D-mesarthrocarpus_Contig943:977..1130Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig943 978..1130 -
1680791097.1860592-CDS-D-mesarthrocarpus_Contig943:1580..17481680791097.1860592-CDS-D-mesarthrocarpus_Contig943:1580..1748Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig943 1581..1748 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791097.199074-UTR-D-mesarthrocarpus_Contig943:1748..17571680791097.199074-UTR-D-mesarthrocarpus_Contig943:1748..1757Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig943 1749..1757 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig943.1.1prot_D-mesarthrocarpus_Contig943.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig943 173..1748 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig943.1.1

>prot_D-mesarthrocarpus_Contig943.1.1 ID=prot_D-mesarthrocarpus_Contig943.1.1|Name=mRNA_D-mesarthrocarpus_Contig943.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=173bp
MGKSEGVDTEGNGPFTRKSLLEGAGKAAGVVGVGGFLRRGFVVGTPYSGT
PDLTGKTAVITGGNTGLGKETAIRLAQLGADVTIACRNPEKASAAVEDIK
VKAPEAKVSSAPLDLASLDSVSSFARGYSQKVEKLDILVNNAGVMAVPER
QSTKEGNELQFGINHLGWWTSR*
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mRNA from alignment at D-mesarthrocarpus_Contig943:173..1757-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig943.1.1 ID=mRNA_D-mesarthrocarpus_Contig943.1.1|Name=mRNA_D-mesarthrocarpus_Contig943.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1585bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig943:173..1757- (Discosporangium mesarthrocarpum MT17_79)
TCCCTGCGGATGGGAAAGAGCGAGGGTGTTGACACAGAAGGCAACGGACC TTTCACGCGTAAATCTCTCCTGGAGGGTGCAGGAAAGGCAGCGGGTGTCG TAGGTGTGGGAGGGTTCTTGAGGAGAGGCTTCGTTGTGGGAACTCCGTAC TCGGGCACGCCGGACCTAACGGGGAAGGTACGCGGTACGTAGTTCTTGTA CATAAGAAAACGAGACACCGACACGCACGATCGCAGCCACGTGCAGAAGT TCACGGATGATGTCGAGACTACAAGCGTGATGTTTCAGTTGCAATAGATG TTACCCTGCAAGATTTGTATGTGGATTTGGTCCTTTGGAACGTGCAATGG GACTTGACAAAACTGATACTTCCGAAGTGCACGCAACAATGTCGCCTACC GCATGACAGGTGAGTTCGCTTTTCGGTTAGCAACCAGTGGGCGAAGTGCA CACATCAAAAAGGTGATTAGTGTTGGTGCATGAGACTTATTCGATGCATC GCACAATCCCTCGTAGAAGTGGCGTACGACTGTTTTGGTGTGTCGCACAA TCTGCGTGGAGCAAGCCCTAGGTTTTCAGGTGAATCTAGCAGTGACCCCT TACATTTTCTGCCTCTCACATGCCCAGACGGCAGTCATCACAGGGGGAAA TACAGGTCTGGGGAAGGAGACGGCTATACGATTGGCACAGCTCGGAGCAG ATGTAACCATAGCCTGTCGCAACCCCGAGAAGGCCTCCGCAGCAGTCGAA GATATCAAGGTTAAGGCGCCTGAAGCCAAGGTGCACGGAGGGATTGGGTA CCTTGGCTAGCTTCTCAGTATCTGCTCGTTCTCTCTCTTGGGCAGCAAAA AATCCAGGAGTGGGTCATTAAGCTTCGAAGTAAAACAGACGTTTTGCATG GCTTGCTAATACCGATGATGCTGACAAGATCGGTCTGCTCTAGAAGGGCA TGCCTAAGTTTCACGTGTAACAATTGAAAAGTCTCTGTTAACTAGTGCAC CAATGCAACCTAATATTGACAGTCATCTGTGCTCTCACTTTGTTGCAATT TTGATGCCTTGCCAGCACTGATTAGAAGGTTAAAGCCTTCAGGGGCGTTG ACATGCACAATGAATGAAGTATCTGAATCTGGTTACCAAGGACGAGGTCA AAGTAAAACTTGCCAAGAGGGACAAGGAATGGGATAATGTAGAAGCAAGT GGAAAGGAAGGGTGGGCTGTGCAGTTTCCCCTGAAGCAGTGTTGAAATCC TAGCGTTTTGGTCATCTGATTATGGAACACCTGGTGCAGATGTCGGTGGG CAGGGGCGGATGAGTCCCTGTGCAAGAACCTAACTGGCTAGACTTGTTCC CATGATGTGTTTCGATGGTCCCCTTGCCCACCCTTAGGTGTCGAGTGCAC CTCTTGACCTGGCATCGCTTGACAGTGTCTCCTCCTTTGCGAGGGGGTAT TCCCAGAAAGTGGAGAAGCTGGACATACTAGTCAACAATGCGGGGGTCAT GGCGGTGCCTGAGAGGCAGTCCACGAAAGAGGGAAATGAGCTTCAGTTTG GCATTAACCACCTAGGTTGGTGGACGAGCAGATAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig943:173..1757-

>mRNA_D-mesarthrocarpus_Contig943.1.1 ID=mRNA_D-mesarthrocarpus_Contig943.1.1|Name=mRNA_D-mesarthrocarpus_Contig943.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=519bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig943:173..1757- (Discosporangium mesarthrocarpum MT17_79)
ATGGGAAAGAGCGAGGGTGTTGACACAGAAGGCAACGGACCTTTCACGCG
TAAATCTCTCCTGGAGGGTGCAGGAAAGGCAGCGGGTGTCGTAGGTGTGG
GAGGGTTCTTGAGGAGAGGCTTCGTTGTGGGAACTCCGTACTCGGGCACG
CCGGACCTAACGGGGAAGACGGCAGTCATCACAGGGGGAAATACAGGTCT
GGGGAAGGAGACGGCTATACGATTGGCACAGCTCGGAGCAGATGTAACCA
TAGCCTGTCGCAACCCCGAGAAGGCCTCCGCAGCAGTCGAAGATATCAAG
GTTAAGGCGCCTGAAGCCAAGGTGTCGAGTGCACCTCTTGACCTGGCATC
GCTTGACAGTGTCTCCTCCTTTGCGAGGGGGTATTCCCAGAAAGTGGAGA
AGCTGGACATACTAGTCAACAATGCGGGGGTCATGGCGGTGCCTGAGAGG
CAGTCCACGAAAGAGGGAAATGAGCTTCAGTTTGGCATTAACCACCTAGG
TTGGTGGACGAGCAGATAG
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