mRNA_D-mesarthrocarpus_Contig9422.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9422.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9422.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: D8LDW9_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDW9_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 2.110e-26
Identity = 45/56 (80.36%), Postives = 54/56 (96.43%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL 168
            +QFF+T+ PTPWLDGKHT+LGRISSGMKV RRMGMVAV+++DKPLQDM+I+RAKPL
Sbjct:  105 SQFFVTLGPTPWLDGKHTILGRISSGMKVVRRMGMVAVNSEDKPLQDMRIVRAKPL 160
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: A0A835Z3Y0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Y0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.270e-24
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL 168
            +QFFIT+APTPWLDGKHT+LGRIS GM V +RMGMVAVD QD+PLQ++KILRA PL
Sbjct:  106 SQFFITLAPTPWLDGKHTILGRISEGMAVVQRMGMVAVDGQDRPLQELKILRATPL 161
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: B6K4N9_SCHJY (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K4N9_SCHJY)

HSP 1 Score: 89.4 bits (220), Expect = 2.670e-21
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL 168
            +QFFIT+APTPWLDGKH + GR+  GM+VCRRMG+V  D  DKPL+D++ILRA  L
Sbjct:  100 SQFFITLAPTPWLDGKHAIFGRVQKGMQVCRRMGLVQTDKNDKPLEDIRILRAAAL 155
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 n=102 Tax=Eurotiales TaxID=5042 RepID=PPIL1_EMENI)

HSP 1 Score: 87.4 bits (215), Expect = 1.810e-20
Identity = 35/54 (64.81%), Postives = 48/54 (88.89%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAK 162
            +QFFIT+APTPWLDGKHT+ GR+ SGM++ +RMG+V  +N+D+PL ++KILRAK
Sbjct:  101 SQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNNEDRPLDEVKILRAK 154
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: A0A1Y1Z548_9FUNG (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z548_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 2.210e-20
Identity = 36/52 (69.23%), Postives = 46/52 (88.46%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILR 156
            +QFFIT+APTPWLDGKHT+ GR+S GMKV +RMG+VA D+ D+P +D+KILR
Sbjct:  101 SQFFITLAPTPWLDGKHTIFGRVSEGMKVVKRMGLVATDSSDRPKEDVKILR 152
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: A0A0G4J0B9_PLABS (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J0B9_PLABS)

HSP 1 Score: 86.7 bits (213), Expect = 4.280e-20
Identity = 37/56 (66.07%), Postives = 48/56 (85.71%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL 168
            +QFFIT+APTPWLDGKHT+ GR+SSGMKV RRM +V VD  D+P++D++I RA+ L
Sbjct:  107 SQFFITLAPTPWLDGKHTIFGRVSSGMKVVRRMSLVQVDGNDRPVEDIRIHRARCL 162
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: A0A4P9YKB2_ROZAC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YKB2_ROZAC)

HSP 1 Score: 85.9 bits (211), Expect = 6.580e-20
Identity = 36/56 (64.29%), Postives = 48/56 (85.71%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL 168
            +QFFIT+APTPWLDGKHT+ GR+ SGMKV +R+G+V  D+ D+PL+D+ IL+A PL
Sbjct:  101 SQFFITLAPTPWLDGKHTIFGRVYSGMKVIQRLGLVPTDSNDRPLEDVFILKAYPL 156
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: H6BMK6_EXODN (Peptidyl-prolyl cis-trans isomerase n=7 Tax=Herpotrichiellaceae TaxID=43219 RepID=H6BMK6_EXODN)

HSP 1 Score: 85.9 bits (211), Expect = 7.250e-20
Identity = 34/54 (62.96%), Postives = 49/54 (90.74%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAK 162
            +QFFIT+APTPWLDGKHT+ GR+ SGMKV +RMG+V  +++D+PL+++KI+RA+
Sbjct:  101 SQFFITLAPTPWLDGKHTIFGRVKSGMKVVQRMGLVKTNSEDRPLEEVKIIRAR 154
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: A0A0D1VM93_9EURO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Exophiala sideris TaxID=1016849 RepID=A0A0D1VM93_9EURO)

HSP 1 Score: 85.1 bits (209), Expect = 1.450e-19
Identity = 34/54 (62.96%), Postives = 48/54 (88.89%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAK 162
            +QFFIT+APTPWLDGKHT+ GR+ SGMKV +RMG V  +++D+PL+++KI+RA+
Sbjct:  101 SQFFITLAPTPWLDGKHTIFGRVKSGMKVVQRMGFVKTNSEDRPLEEVKIIRAR 154
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BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Match: UPI0020078D0B (cyclophilin type peptidyl-prolyl cis-trans isomerase n=1 Tax=Xylaria bambusicola TaxID=326684 RepID=UPI0020078D0B)

HSP 1 Score: 85.1 bits (209), Expect = 1.450e-19
Identity = 35/56 (62.50%), Postives = 47/56 (83.93%), Query Frame = 1 
Query:    1 AQFFITMAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL 168
            +QFFIT+APTPWLDGKHT+ GR+ SGM V +RMG+V  D +D+P+ ++KI+RAK L
Sbjct:  101 SQFFITLAPTPWLDGKHTIFGRVKSGMGVVKRMGLVKTDGEDRPVDEVKIIRAKVL 156
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9422.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDW9_ECTSI2.110e-2680.36Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835Z3Y0_9STRA1.270e-2478.57Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
B6K4N9_SCHJY2.670e-2166.07Peptidyl-prolyl cis-trans isomerase n=1 Tax=Schizo... [more]
PPIL1_EMENI1.810e-2064.81Peptidyl-prolyl cis-trans isomerase-like 1 n=102 T... [more]
A0A1Y1Z548_9FUNG2.210e-2069.23Peptidyl-prolyl cis-trans isomerase n=1 Tax=Basidi... [more]
A0A0G4J0B9_PLABS4.280e-2066.07Peptidyl-prolyl cis-trans isomerase n=1 Tax=Plasmo... [more]
A0A4P9YKB2_ROZAC6.580e-2064.29Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rozell... [more]
H6BMK6_EXODN7.250e-2062.96Peptidyl-prolyl cis-trans isomerase n=7 Tax=Herpot... [more]
A0A0D1VM93_9EURO1.450e-1962.96Peptidyl-prolyl cis-trans isomerase n=1 Tax=Exophi... [more]
UPI0020078D0B1.450e-1962.50cyclophilin type peptidyl-prolyl cis-trans isomera... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9422contigD-mesarthrocarpus_Contig9422:42..392 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LDW9
Preferred namePPIL1
PFAMsPro_isomerase
Model size168
Max annot lvl2759|Eukaryota
KEGG koko:K01802,ko:K12733
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006457,GO:0006464,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016018,GO:0016070,GO:0016071,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0019904,GO:0031974,GO:0031981,GO:0032991,GO:0033218,GO:0034641,GO:0036211,GO:0042277,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071007,GO:0071013,GO:0071014,GO:0071704,GO:0090304,GO:0097718,GO:0140096,GO:1901360,GO:1901564,GO:1902494,GO:1990904
Exons2
Evalue2.26e-23
EggNOG OGsCOG0652@1|root,KOG0881@2759|Eukaryota
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-23_003510.1
EC5.2.1.8
Descriptionpeptidyl-prolyl cis-trans isomerase activity
Cds size150
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03110
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791096.5082955-UTR-D-mesarthrocarpus_Contig9422:41..591680791096.5082955-UTR-D-mesarthrocarpus_Contig9422:41..59Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9422 42..59 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791096.5247118-CDS-D-mesarthrocarpus_Contig9422:59..1251680791096.5247118-CDS-D-mesarthrocarpus_Contig9422:59..125Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9422 60..125 +
1680791096.537072-CDS-D-mesarthrocarpus_Contig9422:308..3921680791096.537072-CDS-D-mesarthrocarpus_Contig9422:308..392Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9422 309..392 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9422.1.1prot_D-mesarthrocarpus_Contig9422.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9422 60..392 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9422.1.1

>prot_D-mesarthrocarpus_Contig9422.1.1 ID=prot_D-mesarthrocarpus_Contig9422.1.1|Name=mRNA_D-mesarthrocarpus_Contig9422.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=50bp
MAPTPWLDGKHTVLGRISSGMKVCRRMGMVAVDNQDKPLQDMKILRAKPL
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mRNA from alignment at D-mesarthrocarpus_Contig9422:42..392+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9422.1.1 ID=mRNA_D-mesarthrocarpus_Contig9422.1.1|Name=mRNA_D-mesarthrocarpus_Contig9422.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=351bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9422:42..392+ (Discosporangium mesarthrocarpum MT17_79)
GCACAGTTTTTCATCACCATGGCTCCAACACCGTGGCTTGATGGCAAACA
CACTGTCCTGGGGCGTATATCATCGGGCATGAAGGTTGGTTGATCCTTGT
GCCTCGTCCCCCTCCAACCCCAGGGTTCCCCTTGGTCCTGGGCTCCCGGT
GTTTGTATGTTAACAAATATTTGTATGTGGAAGGACGGAACGACGGCCTG
TCTGTCCCTTTGCCGTATATGTGAGCCTCTTGTTTCTGCTCATTGCATGC
AACTTGCCCCTCCCAAGGTGTGTCGAAGGATGGGCATGGTGGCTGTGGAT
AACCAGGACAAACCGTTACAGGACATGAAGATACTCCGAGCCAAGCCGCT
G
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9422:42..392+

>mRNA_D-mesarthrocarpus_Contig9422.1.1 ID=mRNA_D-mesarthrocarpus_Contig9422.1.1|Name=mRNA_D-mesarthrocarpus_Contig9422.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=150bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9422:42..392+ (Discosporangium mesarthrocarpum MT17_79)
ATGGCTCCAACACCGTGGCTTGATGGCAAACACACTGTCCTGGGGCGTAT
ATCATCGGGCATGAAGGTGTGTCGAAGGATGGGCATGGTGGCTGTGGATA
ACCAGGACAAACCGTTACAGGACATGAAGATACTCCGAGCCAAGCCGCTG
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