mRNA_D-mesarthrocarpus_Contig9418.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A848W2Y4_9PROT (Flagellar biosynthetic protein FliP n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W2Y4_9PROT) HSP 1 Score: 340 bits (872), Expect = 1.090e-115 Identity = 188/248 (75.81%), Postives = 215/248 (86.69%), Query Frame = 1
Query: 4 VATPAIVLLLAGGLIAAS----GGDADAQSLNLDFGDGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
+A P I L L GL A+ G A AQ+L+LDFGD T T RIVQL+ALLTVLSLAPSII+MVTSFTRIVVVLAF+RSA+GTQQTPPNTV+VSLALFLTAFVMAPT ETA++ GIQPL+ EQI + EAF R MAPV+ FML HVR+ DLRLFLD+A ++ I+ PE TPLR+LIPAFMISELRRAFEIGFL+F+PF++IDMVVAS+LMSMGMMMLPPIMISLPFKLIFFVLVDGWYL+AGSLVQS+G
Sbjct: 8 IAHPLIRLALPLGLALAAMLILSGSAAAQNLSLDFGDDTTATARIVQLVALLTVLSLAPSIIIMVTSFTRIVVVLAFLRSAIGTQQTPPNTVIVSLALFLTAFVMAPTFETAFQEGIQPLIEEQITQTEAFERSMAPVKVFMLTHVRDQDLRLFLDLAEIDAIDEPEATPLRALIPAFMISELRRAFEIGFLLFIPFVIIDMVVASILMSMGMMMLPPIMISLPFKLIFFVLVDGWYLVAGSLVQSFG 255
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A6N7FGC7_9PROT (Flagellar biosynthetic protein FliP n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FGC7_9PROT) HSP 1 Score: 326 bits (836), Expect = 2.830e-110 Identity = 177/225 (78.67%), Postives = 200/225 (88.89%), Query Frame = 1
Query: 61 GDADAQSLNLDFGDGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
G A AQSL+LD G G ++TGRIVQ+IALLTVLSLAPSI+VMVTSFTRIVVVL+F+R+A+G QQTPPN VL+SLALFLTAFVMAPTLE +Y GI P+M E I EEEAF+R +APVR FML+HVRE DLRLFLD++ EA E T LRSLIPAFMISELRRAFEIGFL+FVPF++IDMVVASVLMSMGMMMLPP+MISLPFKLIFFVLVDGWYL+AGSL+QSYG
Sbjct: 25 GPALAQSLSLDLGAGASSTGRIVQIIALLTVLSLAPSILVMVTSFTRIVVVLSFLRNAMGVQQTPPNAVLISLALFLTAFVMAPTLEESYRAGIVPMMDESISEEEAFSRTLAPVRAFMLKHVREQDLRLFLDISGAPPTEAAEATSLRSLIPAFMISELRRAFEIGFLLFVPFLIIDMVVASVLMSMGMMMLPPVMISLPFKLIFFVLVDGWYLVAGSLIQSYG 249
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A2E6GM75_9PROT (Flagellar biosynthetic protein FliP n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GM75_9PROT) HSP 1 Score: 323 bits (827), Expect = 6.180e-109 Identity = 172/221 (77.83%), Postives = 198/221 (89.59%), Query Frame = 1
Query: 73 AQSLNLDFGDGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
AQS++LD GDGP+ TGRIVQ+IAL+TVLSLAPSI+VMVTSFTRIVVVL+F+R+ALG QQTPPN VL+SLALFLTAFVMAPTLE +Y+ GI PL+A +I+EEEAF+R + PV FM+ HVRE DL+LF+D++ E E TPLRSLI AFMISELRRAFEIGFLIFVPF+VIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYL+AGSL++SYG
Sbjct: 27 AQSMSLDLGDGPSATGRIVQIIALITVLSLAPSILVMVTSFTRIVVVLSFLRNALGVQQTPPNAVLISLALFLTAFVMAPTLEQSYKAGIAPLLANEINEEEAFSRSVKPVHGFMMSHVREQDLKLFMDISKAPPTETAEKTPLRSLIRAFMISELRRAFEIGFLIFVPFLVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLVAGSLIRSYG 247
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A2A5DN32_9PROT (Flagellar biosynthetic protein FliP n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2A5DN32_9PROT) HSP 1 Score: 322 bits (824), Expect = 1.890e-108 Identity = 171/224 (76.34%), Postives = 198/224 (88.39%), Query Frame = 1
Query: 61 GDADAQSLNLDFGDGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSY 732
G A AQ+L LDFG+G + TGR++QLIALLTVLSLAPSI+VMVTSFTRIV+VL+FVRSA+G QQTPPN VL+SLALFLTAF+M PTLE AY GI PL+ EQI EEAF R AP+ FM+ HVRE DL LF+DMA +ETIE P+DTPLR LIPAFMISELRRAFEIGFLIF+PF++ID+VVAS+LMSMGMMMLPPIMISLPFK+IFFVLVDGW+LIAGSL++S+
Sbjct: 27 GPAAAQNLTLDFGEGGSATGRLLQLIALLTVLSLAPSILVMVTSFTRIVIVLSFVRSAMGLQQTPPNAVLISLALFLTAFIMQPTLEAAYRDGIAPLIDEQITGEEAFERTTAPLHSFMMTHVREEDLGLFIDMAKLETIERPDDTPLRVLIPAFMISELRRAFEIGFLIFIPFLIIDLVVASILMSMGMMMLPPIMISLPFKVIFFVLVDGWHLIAGSLIKSF 250
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A6A7KN27_9PROT (Flagellar biosynthetic protein FliP n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KN27_9PROT) HSP 1 Score: 317 bits (811), Expect = 2.060e-106 Identity = 172/240 (71.67%), Postives = 201/240 (83.75%), Query Frame = 1
Query: 16 AIVLLLAGGLIAASGGDADAQSLNLDFGDGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
AI LLA + G AQ+L LDFG G TG+IVQLIALLT+L+LAPSI+VMVTSF RIV+VL+ +R+A+GTQ TPPNTV++SLALF+T F+M PTL+ +Y GI PL+AEQI EE+A R +APVR FML HVRE DL LFL MA VE +E PE TPL++LIPAFMISELRRAFEIGFL+FVPF++IDMVVASVLMSMGMMMLPP+MISLPFKLIFFVLVDGWYL+AGSLVQS+G
Sbjct: 13 AIAPLLAFACVTLLPGVTAAQNLTLDFGTGGEATGKIVQLIALLTILTLAPSILVMVTSFVRIVIVLSLLRTAIGTQGTPPNTVIISLALFMTLFIMQPTLQASYRDGIAPLIAEQISEEQALDRTLAPVRTFMLAHVREKDLGLFLGMARVENVETPEATPLQALIPAFMISELRRAFEIGFLLFVPFLIIDMVVASVLMSMGMMMLPPVMISLPFKLIFFVLVDGWYLVAGSLVQSFG 252
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A2D9HWT2_9PROT (Flagellar biosynthetic protein FliP n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9HWT2_9PROT) HSP 1 Score: 315 bits (808), Expect = 8.010e-106 Identity = 161/237 (67.93%), Postives = 201/237 (84.81%), Query Frame = 1
Query: 22 VLLLAGGLIAASGGDADAQSLNLDFGDGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSY 732
+LLL G + G + AQS+N+D G+G T TGR+VQL+ALLTVLSLAPS++VM+TSFTR+++ + +R+A G QQTPPNTVL+SLALFLT F+M PTLE +Y GIQPL+ E+I E+EAF +AP RDFML+HVR+ DL LF+D+ + +E P+DTPLR+LIPAFMISEL+RAFEIGFL+FVPF+VIDMV+AS+LMSMGMMMLPP+MISLPFKLIFFVLVDGWYL+ GSLVQS+
Sbjct: 25 MLLLVGSAVVLPAGPSLAQSINIDIGEGGTVTGRLVQLVALLTVLSLAPSLLVMITSFTRLIIAFSLLRTAFGAQQTPPNTVLISLALFLTFFIMQPTLERSYNEGIQPLIEERISEQEAFDLAIAPFRDFMLRHVRDRDLMLFMDIGGMPAVENPDDTPLRALIPAFMISELKRAFEIGFLLFVPFVVIDMVIASILMSMGMMMLPPVMISLPFKLIFFVLVDGWYLVVGSLVQSF 261
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A3M0XZD2_9PROT (Flagellar biosynthetic protein FliP n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XZD2_9PROT) HSP 1 Score: 315 bits (806), Expect = 2.120e-105 Identity = 182/249 (73.09%), Postives = 207/249 (83.13%), Query Frame = 1
Query: 4 VATPAIV---LLLAGGLIAASGGD-ADAQSLNLDFGDGP-TTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
V P IV +LLAG + G D A AQ+L LDFGDG +TT R++QLI L+TVLSLAPSI+VMVTSFTRIVVVL+F+RSALG QQTPPN+VL+SLALFLT FVM PTLET Y+ IQPLM E++ E EA PVR FML HVRE DL+LFLD++ + +PE+TPLRSLIPAFMISELRRAFEIGFL+F+PFIVIDMVVASVLMSMGM+MLPPIMISLPFKLIFFVLVDGWYL+AGSLVQSYG
Sbjct: 26 VILPGIVPFGVLLAGAFL--FGADPAAAQTLQLDFGDGGGSTTARLLQLILLITVLSLAPSILVMVTSFTRIVVVLSFLRSALGIQQTPPNSVLISLALFLTLFVMMPTLETVYDRAIQPLMNEEVSELEAIDLAAQPVRKFMLAHVREQDLKLFLDLSKAPPVASPEETPLRSLIPAFMISELRRAFEIGFLLFLPFIVIDMVVASVLMSMGMLMLPPIMISLPFKLIFFVLVDGWYLVAGSLVQSYG 272
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A564WHZ1_9PROT (Flagellar biosynthetic protein FliP n=2 Tax=root TaxID=1 RepID=A0A564WHZ1_9PROT) HSP 1 Score: 313 bits (803), Expect = 2.760e-105 Identity = 166/226 (73.45%), Postives = 196/226 (86.73%), Query Frame = 1
Query: 61 GDADAQSLNLDFGDG-PTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
G A AQS+ L GDG PT TGRI+QL+AL+TVLSLAPSI+VMVTSFTRIV+VL+FVR+ALGTQQTPPN VLVSLALFLT FVM PTLE Y+ GI+PL+A ++DE EAF R PV FM+QHVR DL LF++MA + +EA +D PLR+L+PAFM+SELRRAFEIGFLIFVPF+VIDMVVASVLMSMGMMMLPP+MI+LPFK++FFVLVDGWYL+ GSLV+S+G
Sbjct: 23 GPACAQSIALTLGDGGPTVTGRIIQLLALMTVLSLAPSILVMVTSFTRIVIVLSFVRTALGTQQTPPNQVLVSLALFLTLFVMMPTLEQVYDDGIKPLLAGEVDEAEAFERATKPVHAFMMQHVRGQDLNLFMEMARIPAVEAEDDVPLRALVPAFMVSELRRAFEIGFLIFVPFLVIDMVVASVLMSMGMMMLPPVMIALPFKIVFFVLVDGWYLVVGSLVRSFG 248
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: UPI001422D9BB (flagellar type III secretion system pore protein FliP n=2 Tax=Pelagibius TaxID=643951 RepID=UPI001422D9BB) HSP 1 Score: 313 bits (803), Expect = 3.060e-105 Identity = 166/223 (74.44%), Postives = 196/223 (87.89%), Query Frame = 1
Query: 73 AQSLNLDFG--DGPTTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
AQ+L D G TTTGRI+QLIAL+TVLSLAPSI+VM+TSFTRIVVVL+F+R+ALG QQTPPN+V+VSLALFLTAF+M PT+E Y+ ++PL+AE I E EA R PVRDFM+ HVRE+DLRLFLD+ + ET+E PE TP+R+LIPAFMISELRRAFEIGFL+F+PF++IDMVVAS+LMSMGMMMLPPIMISLPFKLIFFVLVDGWY++AGSLVQSYG
Sbjct: 29 AQALTFDLGAETAGTTTGRILQLIALITVLSLAPSILVMMTSFTRIVVVLSFLRTALGLQQTPPNSVIVSLALFLTAFIMMPTIEAVYDEALEPLIAEDITEFEALDRAQGPVRDFMMSHVRESDLRLFLDLTDTETLEDPEATPMRALIPAFMISELRRAFEIGFLLFLPFLIIDMVVASILMSMGMMMLPPIMISLPFKLIFFVLVDGWYMVAGSLVQSYG 251
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Match: A0A1Y6CPV5_9HYPH (Flagellar biosynthetic protein FliP n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6CPV5_9HYPH) HSP 1 Score: 313 bits (802), Expect = 3.780e-105 Identity = 167/224 (74.55%), Postives = 198/224 (88.39%), Query Frame = 1
Query: 67 ADAQSLNLDFGDGP-TTTGRIVQLIALLTVLSLAPSIIVMVTSFTRIVVVLAFVRSALGTQQTPPNTVLVSLALFLTAFVMAPTLETAYETGIQPLMAEQIDEEEAFTRVMAPVRDFMLQHVREADLRLFLDMANVETIEAPEDTPLRSLIPAFMISELRRAFEIGFLIFVPFIVIDMVVASVLMSMGMMMLPPIMISLPFKLIFFVLVDGWYLIAGSLVQSYG 735
A AQ+L+L+ G+G ++TGRI+QL+AL+TVLSLAPSI+VMVTSFTRIVVVL+F+RSALG QQTPPN+VL+SLALFLT FVM PTLE Y+ IQPL+AE IDE A R PVR FML HVRE DL+LF+D++ E + +P+DTPLR+LIPAFMISELRRAFEIGFL+F+PF++IDMVVAS+LMSMGMMMLPP+MISLPFKLIFFVLVDGWYL+AGSLVQSYG
Sbjct: 25 AAAQTLSLNLGEGEGSSTGRILQLVALVTVLSLAPSILVMVTSFTRIVVVLSFLRSALGIQQTPPNSVLISLALFLTLFVMMPTLEQIYDQAIQPLVAEDIDEMTALDRAAVPVRQFMLAHVRERDLKLFMDLSKAEPVASPDDTPLRALIPAFMISELRRAFEIGFLLFLPFLIIDMVVASILMSMGMMMLPPVMISLPFKLIFFVLVDGWYLVAGSLVQSYG 248 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9418.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9418.1.1 >prot_D-mesarthrocarpus_Contig9418.1.1 ID=prot_D-mesarthrocarpus_Contig9418.1.1|Name=mRNA_D-mesarthrocarpus_Contig9418.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=246bp FVATPAIVLLLAGGLIAASGGDADAQSLNLDFGDGPTTTGRIVQLIALLTback to top mRNA from alignment at D-mesarthrocarpus_Contig9418:1361..2098+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9418.1.1 ID=mRNA_D-mesarthrocarpus_Contig9418.1.1|Name=mRNA_D-mesarthrocarpus_Contig9418.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=738bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9418:1361..2098+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9418:1361..2098+ >mRNA_D-mesarthrocarpus_Contig9418.1.1 ID=mRNA_D-mesarthrocarpus_Contig9418.1.1|Name=mRNA_D-mesarthrocarpus_Contig9418.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=738bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9418:1361..2098+ (Discosporangium mesarthrocarpum MT17_79)back to top |