mRNA_D-mesarthrocarpus_Contig940.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig940.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig940.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig940.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig940contigD-mesarthrocarpus_Contig940:7098..10485 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size2148
Hectar predicted targeting categoryother localisation
Exons4
Cds size2148
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791094.0031488-CDS-D-mesarthrocarpus_Contig940:7097..87381680791094.0031488-CDS-D-mesarthrocarpus_Contig940:7097..8738Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig940 7098..8738 +
1680791094.02009-CDS-D-mesarthrocarpus_Contig940:9177..93101680791094.02009-CDS-D-mesarthrocarpus_Contig940:9177..9310Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig940 9178..9310 +
1680791094.0319152-CDS-D-mesarthrocarpus_Contig940:9868..99841680791094.0319152-CDS-D-mesarthrocarpus_Contig940:9868..9984Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig940 9869..9984 +
1680791094.0419548-CDS-D-mesarthrocarpus_Contig940:10227..104851680791094.0419548-CDS-D-mesarthrocarpus_Contig940:10227..10485Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig940 10228..10485 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig940.7.1prot_D-mesarthrocarpus_Contig940.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig940 7098..10485 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig940.7.1

>prot_D-mesarthrocarpus_Contig940.7.1 ID=prot_D-mesarthrocarpus_Contig940.7.1|Name=mRNA_D-mesarthrocarpus_Contig940.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=716bp
GGKGLKGVQEGADAVEHVGRDIFADLCKGVRMRALLVLAMRSAATAEGLA
RGTAGGSISRDGMGGKKGVFKVWKQRKEEGVAHLITKFLCLLPNDPSYVA
DHVAAEIEAQQRLATARETGLHLLAHLIQTISFSSVRADALCHLPLSLLP
TSRAWWGNDPGIILASDSMGGDTSSAPRGPGRPDPRAPGDGGPARGATLG
TFDLGTGSDFVGGAGAREPLPRLGMGGQAGPAAPAQLNMSDPKVPRKDWE
FGAPPPSCLGGGAVPVPPWMEGLGGSGAASERRLEEASTALAGALLSLLP
GALKDGDASLACMILCSGGLRWGCLGSGGCSGSVVGKGASAEWAVSKRAA
PVLSPAGPANGDSEAQGLDEVERGTDPRGRDSGGAGGAYDAQRVLRLVRV
ILGLTTAVQGDRVGGSAAPPLLLTEEGGSLRGRLTHALLPLREVWGGLRD
GKLTARAVLSSLWVAAHAHGGVTALALAPPEELLKRVVRRGETSGAGLAL
ELYEGVVREAELQWMQANEVSVEVESTEVERMAAEERRARGVRHTYVVTA
KHGIGVRAGPHSKADRTGSSLRQKEIVEVSYRVPLSNGQTFLKLARTGGK
KPPRARKGKTHHMKSAWVFTQGTKGSYKGKSILAYVGPEPGIEGEDQQRE
EERGSCGKLLALHPATKRGRSREPGRGRGRDRVEILKDGLTAYCHGNSAD
GGGGAAGGAEGSESPY
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mRNA from alignment at D-mesarthrocarpus_Contig940:7098..10485+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig940.7.1 ID=mRNA_D-mesarthrocarpus_Contig940.7.1|Name=mRNA_D-mesarthrocarpus_Contig940.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3388bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig940:7098..10485+ (Discosporangium mesarthrocarpum MT17_79)
GGGGGGAAGGGATTGAAGGGGGTACAGGAGGGTGCAGACGCCGTGGAGCA
CGTGGGTCGTGACATCTTCGCCGATTTATGCAAGGGCGTTCGGATGCGGG
CGCTATTGGTGCTCGCGATGAGATCTGCTGCAACCGCCGAAGGCTTGGCT
CGGGGAACCGCTGGGGGTAGCATCTCAAGGGACGGAATGGGCGGGAAGAA
AGGTGTCTTCAAGGTTTGGAAGCAGAGAAAGGAGGAAGGGGTGGCTCATC
TTATCACCAAGTTCTTGTGCCTCCTCCCCAACGACCCATCGTACGTGGCC
GACCACGTCGCAGCAGAGATTGAGGCACAGCAGAGGCTGGCCACAGCAAG
GGAGACAGGACTCCACCTCCTGGCCCACCTCATCCAGACTATATCCTTCT
CCTCAGTCAGAGCCGATGCCCTCTGCCATCTCCCACTCAGCCTCCTCCCC
ACCTCGAGGGCCTGGTGGGGCAACGACCCCGGGATAATTTTGGCTTCCGA
TTCTATGGGCGGAGACACGAGCTCAGCTCCGAGGGGCCCTGGGCGTCCCG
ACCCTCGTGCCCCTGGAGACGGAGGACCCGCCCGAGGGGCAACTCTTGGC
ACCTTTGACCTGGGGACAGGTTCCGACTTTGTGGGCGGGGCAGGGGCCAG
GGAGCCTCTTCCAAGACTCGGGATGGGTGGGCAAGCTGGCCCCGCCGCGC
CGGCCCAGCTGAACATGAGCGACCCGAAGGTTCCAAGAAAAGATTGGGAG
TTTGGCGCACCACCTCCGTCCTGTCTGGGGGGGGGCGCTGTGCCTGTTCC
ACCGTGGATGGAGGGTCTCGGAGGGTCGGGCGCAGCGTCTGAGAGGCGAC
TTGAGGAAGCCTCTACAGCCTTGGCGGGGGCTCTTCTTTCTTTGCTGCCG
GGTGCGCTCAAGGACGGCGACGCCTCACTTGCTTGCATGATACTTTGCTC
CGGGGGATTAAGGTGGGGCTGTCTTGGAAGTGGAGGCTGCAGTGGAAGCG
TAGTTGGGAAGGGAGCGAGCGCTGAATGGGCAGTTTCGAAGCGTGCTGCC
CCTGTACTTTCTCCCGCTGGCCCAGCGAATGGAGATAGCGAGGCCCAAGG
CCTGGATGAAGTTGAGAGAGGTACGGATCCCAGAGGTAGGGATAGTGGTG
GCGCTGGTGGTGCCTATGACGCACAGCGTGTCCTCCGTTTGGTGCGCGTC
ATATTGGGGCTGACAACCGCCGTTCAGGGTGACAGGGTCGGCGGAAGTGC
TGCTCCTCCTCTGCTCCTGACCGAGGAGGGCGGGTCGCTCCGGGGGCGGT
TGACCCACGCTCTGTTGCCGCTCAGAGAGGTGTGGGGGGGGCTCCGTGAC
GGGAAGCTTACCGCGAGGGCAGTGCTTTCCAGCCTGTGGGTTGCTGCTCA
TGCCCATGGAGGCGTGACTGCCCTGGCCCTTGCCCCCCCTGAAGAGTTGC
TGAAGCGGGTTGTGAGAAGGGGTGAAACAAGCGGGGCAGGGTTGGCCCTG
GAGCTATACGAGGGGGTTGTCAGGGAGGCGGAGTTGCAGTGGATGCAGGC
CAATGAGGTGTCCGTCGAGGTAGAATCAACGGAGGTGGAGAGGATGGCAG
CGGAGGAACGCAGGGCAAGGGGTGTGAGGCACACCTACGTGGTAAGGGAA
AGAACGGGGTTGCCTCAAGTGTGGTGGAGTAGGTCAGTGTGGATTGTTTT
AGGGGGAGGGGCAAAGGGTCATTGGAGGACCAAAGGATAGTGGGTAGCTC
TCGTGTGGGATAGGGTGTGGGAGGGGAGCAGAGGTTTGTCGACCACTGCT
TTTTCGGTGGGTGTACAATGCTGCTGGCCAACCTATGCTCCTCCCAGTAA
TTCCTTCCCGGTATGGTGTGGTCCTACCTGCTACGCTACTGTCCTTCTCA
CCGCTACGCATGCTCGCCTTATGTCTAAGACCTCCCCCTCGTCGTATCTC
AACCTGAACCGAAATGCAACTTCTTTCTTTGCAGCTGAAGCCTGGACCAC
TTCGTTCACCCTGCGCGCGCATCTAATTCTGGTGCTTTGCCCTGGGTACC
TTCTCTTGTCTGTGGATGCCCACTGTGCAGGTCACAGCGAAGCACGGGAT
TGGAGTTCGTGCCGGCCCCCACAGCAAGGCAGATCGAACTGGCAGCAGCC
TTCGCCAGAAGGAGATCGTGGAGGTCTCCTATCGCGTCCCTCTTTCAAAC
GGCCAGACTTTCCGTGAGTGAGGATAGTGAGCCCTTTTGGGTTAGGATGT
ACTGCAGACAGGTAGATTGGAATCATACGGCACTGCCTATCTTGCTGATG
TGACACACGGTGCAATATGCCTTGAAGAATTCGGGAGTGGGTTACTTCGG
ATAGGGATACCACAGGAAAGAGACGTGTTGGAGGGCAAACATGATGATGA
CTCACATACTCGGGGAAATCCTCGGAGGTGTTTAGCATTAGGGTTAGGGG
ATAGGGTTAGTATTTTACGAAGCATGATGTACTTTCTCTACTTCCGCATA
CATATATTAGAACATTTATTTGTCGACTGGTTGTTGGTTCGTACGGTAGA
GCTCTAGGGCTGAGGCAGGACTGCAAAAAAGACGCCCTTGCATCGGCTTC
GTTGTGGACAATCATTGTAAGTGCCCAGAGCAATACCATAGCCCCCCATG
CCTACCCACGTAACCTCAGCATTGTCGCAAGGGGACTGAAACCTCTCTTT
GCCCACCCAGGGATAGGACAGGAAGGCCTTGTAACCTTCCCACCACGTCC
ACCCCTTGTCCTCATTCACAGTGAAGCTCGCCAGAACTGGAGGGAAGAAA
CCGCCGCGGGCAAGGAAAGGGAAAACTCACCACATGAAGTCTGCTTGGGT
TTTTACTCAAGGAACCAAGGGGTCCTACAAGGGCAAGGTGGGAAGGAACT
AAGGGCATGGAGGGCGGACATAGTTTTATGTTAAAGTCTTCGTGAGCTGA
AACCTCAAATTCTTAGCATGGCAATAGGAATACTTCGGGGTACACTGGAA
AGATCCCGTCCTGTTTTCAGGAGGGGCAACCTTCAGTCATAGCCAATGCT
CGTCGCATCTAACCCTTGTCCTGTTCACGCACACCCCGTGCCCACTCTCT
TTGGCTTTCAACCCTTCGATACTGCAACAGTCTATCCTGGCCTACGTGGG
TCCAGAGCCAGGGATAGAAGGAGAGGACCAGCAAAGAGAAGAAGAAAGAG
GCAGCTGCGGCAAGCTCCTGGCCCTTCACCCAGCCACGAAGCGTGGGCGT
TCCAGGGAGCCTGGTCGAGGACGGGGAAGGGACCGGGTCGAGATCCTGAA
GGACGGCCTCACAGCTTACTGCCACGGCAATTCAGCCGATGGTGGGGGCG
GAGCTGCAGGCGGTGCAGAGGGATCAGAAAGCCCCTAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig940:7098..10485+

>mRNA_D-mesarthrocarpus_Contig940.7.1 ID=mRNA_D-mesarthrocarpus_Contig940.7.1|Name=mRNA_D-mesarthrocarpus_Contig940.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2148bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig940:7098..10485+ (Discosporangium mesarthrocarpum MT17_79)
GGGGGGAAGGGATTGAAGGGGGTACAGGAGGGTGCAGACGCCGTGGAGCA
CGTGGGTCGTGACATCTTCGCCGATTTATGCAAGGGCGTTCGGATGCGGG
CGCTATTGGTGCTCGCGATGAGATCTGCTGCAACCGCCGAAGGCTTGGCT
CGGGGAACCGCTGGGGGTAGCATCTCAAGGGACGGAATGGGCGGGAAGAA
AGGTGTCTTCAAGGTTTGGAAGCAGAGAAAGGAGGAAGGGGTGGCTCATC
TTATCACCAAGTTCTTGTGCCTCCTCCCCAACGACCCATCGTACGTGGCC
GACCACGTCGCAGCAGAGATTGAGGCACAGCAGAGGCTGGCCACAGCAAG
GGAGACAGGACTCCACCTCCTGGCCCACCTCATCCAGACTATATCCTTCT
CCTCAGTCAGAGCCGATGCCCTCTGCCATCTCCCACTCAGCCTCCTCCCC
ACCTCGAGGGCCTGGTGGGGCAACGACCCCGGGATAATTTTGGCTTCCGA
TTCTATGGGCGGAGACACGAGCTCAGCTCCGAGGGGCCCTGGGCGTCCCG
ACCCTCGTGCCCCTGGAGACGGAGGACCCGCCCGAGGGGCAACTCTTGGC
ACCTTTGACCTGGGGACAGGTTCCGACTTTGTGGGCGGGGCAGGGGCCAG
GGAGCCTCTTCCAAGACTCGGGATGGGTGGGCAAGCTGGCCCCGCCGCGC
CGGCCCAGCTGAACATGAGCGACCCGAAGGTTCCAAGAAAAGATTGGGAG
TTTGGCGCACCACCTCCGTCCTGTCTGGGGGGGGGCGCTGTGCCTGTTCC
ACCGTGGATGGAGGGTCTCGGAGGGTCGGGCGCAGCGTCTGAGAGGCGAC
TTGAGGAAGCCTCTACAGCCTTGGCGGGGGCTCTTCTTTCTTTGCTGCCG
GGTGCGCTCAAGGACGGCGACGCCTCACTTGCTTGCATGATACTTTGCTC
CGGGGGATTAAGGTGGGGCTGTCTTGGAAGTGGAGGCTGCAGTGGAAGCG
TAGTTGGGAAGGGAGCGAGCGCTGAATGGGCAGTTTCGAAGCGTGCTGCC
CCTGTACTTTCTCCCGCTGGCCCAGCGAATGGAGATAGCGAGGCCCAAGG
CCTGGATGAAGTTGAGAGAGGTACGGATCCCAGAGGTAGGGATAGTGGTG
GCGCTGGTGGTGCCTATGACGCACAGCGTGTCCTCCGTTTGGTGCGCGTC
ATATTGGGGCTGACAACCGCCGTTCAGGGTGACAGGGTCGGCGGAAGTGC
TGCTCCTCCTCTGCTCCTGACCGAGGAGGGCGGGTCGCTCCGGGGGCGGT
TGACCCACGCTCTGTTGCCGCTCAGAGAGGTGTGGGGGGGGCTCCGTGAC
GGGAAGCTTACCGCGAGGGCAGTGCTTTCCAGCCTGTGGGTTGCTGCTCA
TGCCCATGGAGGCGTGACTGCCCTGGCCCTTGCCCCCCCTGAAGAGTTGC
TGAAGCGGGTTGTGAGAAGGGGTGAAACAAGCGGGGCAGGGTTGGCCCTG
GAGCTATACGAGGGGGTTGTCAGGGAGGCGGAGTTGCAGTGGATGCAGGC
CAATGAGGTGTCCGTCGAGGTAGAATCAACGGAGGTGGAGAGGATGGCAG
CGGAGGAACGCAGGGCAAGGGGTGTGAGGCACACCTACGTGGTCACAGCG
AAGCACGGGATTGGAGTTCGTGCCGGCCCCCACAGCAAGGCAGATCGAAC
TGGCAGCAGCCTTCGCCAGAAGGAGATCGTGGAGGTCTCCTATCGCGTCC
CTCTTTCAAACGGCCAGACTTTCCTGAAGCTCGCCAGAACTGGAGGGAAG
AAACCGCCGCGGGCAAGGAAAGGGAAAACTCACCACATGAAGTCTGCTTG
GGTTTTTACTCAAGGAACCAAGGGGTCCTACAAGGGCAAGTCTATCCTGG
CCTACGTGGGTCCAGAGCCAGGGATAGAAGGAGAGGACCAGCAAAGAGAA
GAAGAAAGAGGCAGCTGCGGCAAGCTCCTGGCCCTTCACCCAGCCACGAA
GCGTGGGCGTTCCAGGGAGCCTGGTCGAGGACGGGGAAGGGACCGGGTCG
AGATCCTGAAGGACGGCCTCACAGCTTACTGCCACGGCAATTCAGCCGAT
GGTGGGGGCGGAGCTGCAGGCGGTGCAGAGGGATCAGAAAGCCCCTAT
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