mRNA_D-mesarthrocarpus_Contig940.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig940.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig940.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig940.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig940contigD-mesarthrocarpus_Contig940:4609..6894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008612916.1
Preferred nameTRIM67
PFAMsHECT,SPRY,fn3,zf-B_box,zf-C3HC4,zf-C3HC4_3,zf-RING_UBOX
Model size1653
Max annot lvl2759|Eukaryota
KEGG rclassRC00087,RC00088,RC00099,RC00108
KEGG koko:K00002,ko:K00688,ko:K10614,ko:K10649
KEGG ReactionR00746,R01041,R01481,R02111,R05231
KEGG Pathwayko00010,ko00040,ko00500,ko00561,ko00930,ko01100,ko01110,ko01120,ko01130,ko01220,ko02026,ko04120,ko04217,ko04910,ko04922,ko04931,map00010,map00040,map00500,map00561,map00930,map01100,map01110,map01120,map01130,map01220,map02026,map04120,map04217,map04910,map04922,map04931
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0000902,GO:0000904,GO:0001505,GO:0001654,GO:0003674,GO:0003824,GO:0004842,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006836,GO:0006887,GO:0006928,GO:0006935,GO:0006937,GO:0006942,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007422,GO:0007423,GO:0008016,GO:0008021,GO:0008037,GO:0008038,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009057,GO:0009605,GO:0009653,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010769,GO:0010959,GO:0010975,GO:0010976,GO:0012505,GO:0016043,GO:0016079,GO:0016192,GO:0016198,GO:0016199,GO:0016567,GO:0016740,GO:0017156,GO:0017157,GO:0017158,GO:0019222,GO:0019538,GO:0019787,GO:0019904,GO:0019941,GO:0022008,GO:0022603,GO:0022604,GO:0022607,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0023061,GO:0030030,GO:0030031,GO:0030133,GO:0030154,GO:0030162,GO:0030163,GO:0030182,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030544,GO:0031072,GO:0031175,GO:0031252,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031333,GO:0031338,GO:0031339,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0032268,GO:0032270,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032446,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032940,GO:0032970,GO:0032989,GO:0032990,GO:0033043,GO:0033267,GO:0033563,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035542,GO:0035544,GO:0035637,GO:0036211,GO:0036477,GO:0038007,GO:0040011,GO:0040012,GO:0042176,GO:0042221,GO:0042330,GO:0042391,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043025,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043254,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0043412,GO:0043632,GO:0044057,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044295,GO:0044297,GO:0044325,GO:0044422,GO:0044424,GO:0044444,GO:0044449,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045202,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045760,GO:0045823,GO:0045862,GO:0045920,GO:0045933,GO:0045955,GO:0045989,GO:0045995,GO:0046578,GO:0046580,GO:0046872,GO:0046903,GO:0046907,GO:0046914,GO:0046983,GO:0048468,GO:0048471,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048934,GO:0048935,GO:0048936,GO:0050767,GO:0050769,GO:0050770,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051056,GO:0051058,GO:0051087,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051270,GO:0051272,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0051960,GO:0051962,GO:0055117,GO:0055120,GO:0060255,GO:0060284,GO:0060306,GO:0060307,GO:0060341,GO:0060452,GO:0060627,GO:0061337,GO:0061564,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0086004,GO:0086019,GO:0086065,GO:0090257,GO:0090325,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098793,GO:0098900,GO:0098901,GO:0098903,GO:0098910,GO:0098911,GO:0098916,GO:0099003,GO:0099080,GO:0099081,GO:0099503,GO:0099504,GO:0099512,GO:0099536,GO:0099537,GO:0099623,GO:0099643,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1901016,GO:1901018,GO:1901207,GO:1901379,GO:1901381,GO:1901564,GO:1901565,GO:1901575,GO:1902259,GO:1902261,GO:1902531,GO:1902532,GO:1903050,GO:1903052,GO:1903115,GO:1903116,GO:1903305,GO:1903306,GO:1903362,GO:1903364,GO:1903522,GO:1903524,GO:1903530,GO:1903531,GO:1903760,GO:1903762,GO:1903779,GO:1903781,GO:1903818,GO:1903827,GO:1903947,GO:1903949,GO:1903952,GO:1903954,GO:1904062,GO:1904064,GO:1905024,GO:1905026,GO:1905031,GO:1905033,GO:1905330,GO:2000026,GO:2000027,GO:2000058,GO:2000060,GO:2000826,GO:2001257,GO:2001259
Exons2
Evalue7.12e-10
EggNOG OGsCOG5184@1|root,KOG0379@1|root,KOG2242@1|root,KOG4367@1|root,KOG0379@2759|Eukaryota,KOG1426@2759|Eukaryota,KOG2242@2759|Eukaryota,KOG4367@2759|Eukaryota
EC1.1.1.2,2.3.2.26,2.4.1.1
Descriptionnegative regulation of SNARE complex assembly
Cds size1650
COG categoryG
CAZyGT35
BRITEko00000,ko00001,ko00002,ko01000,ko04121,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791094.4300473-CDS-D-mesarthrocarpus_Contig940:4608..47821680791094.4300473-CDS-D-mesarthrocarpus_Contig940:4608..4782Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig940 4609..4782 +
1680791094.4425972-CDS-D-mesarthrocarpus_Contig940:5417..68931680791094.4425972-CDS-D-mesarthrocarpus_Contig940:5417..6893Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig940 5418..6893 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig940.5.1prot_D-mesarthrocarpus_Contig940.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig940 4609..6893 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig940.5.1

>prot_D-mesarthrocarpus_Contig940.5.1 ID=prot_D-mesarthrocarpus_Contig940.5.1|Name=mRNA_D-mesarthrocarpus_Contig940.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=550bp
PGPGGCWSSLTLDQGCTAQHGQVWCGEGVFSHVDKERDGVWASAPAVLGL
RSGTHVWQISVESLGSIPGATTLAFSSRDSFYPSIAIGVVQDPLSVSGLR
HAGRSPGSWAWLSDGTLWHNGQEHAASAGVVPAPDHRQGVAGVHSGDREW
DPLEARENLSTGDLVTVILDLDAGTLSLAFNGRVPQLLFGPPGSGAKIEI
PVAPGTATGPDSRCAEGQQESKEGDFRVFPVVSLRSYGGRVKVKAGGVCG
SVSVPWLLDLAKTAAWTGGRLSAALVASALVDPRQELAGMDGGSWARRRW
LDTAAFVGGLETQEGGAMSWKNPWWPGSHPVKRSGEKEHHARSGSGQEVS
TGEAFVSGSINATTSSDTPAHALRFLKAVAWGFEDTAEVDDSSHERDPTV
NRTEGEGGGPARVLLNWLEDACPLTSTEATILSRLKGDGGERHLKSCEYA
FLAALLKHTGLWAEALAALEAIGDGGDPGGGIPRQEQGLVAEAGGGQGIV
PAPSKAMQALWRQVQTLRAYLFRSQHACRSMSLKELRNVLLSAGAMTGGG
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mRNA from alignment at D-mesarthrocarpus_Contig940:4609..6894+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig940.5.1 ID=mRNA_D-mesarthrocarpus_Contig940.5.1|Name=mRNA_D-mesarthrocarpus_Contig940.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2286bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig940:4609..6894+ (Discosporangium mesarthrocarpum MT17_79)
CCCGGGCCCGGGGGGTGTTGGTCCTCCCTCACCCTGGACCAGGGCTGCAC
GGCACAGCACGGGCAGGTCTGGTGCGGGGAAGGCGTCTTCAGCCATGTAG
ACAAGGAGAGGGACGGCGTGTGGGCCAGCGCCCCTGCCGTCTTGGGCCTT
AGGAGTGGGACACACGTGTGGCAGGTAGGTGCATTCTAAGTTGTCGACGG
GTTTGGACTGAAGAGTGGACTGGACAGTTAATTTTTATGGTCAGAGTATT
TAGGGCTGTGGATGAAGTGGAGATGACGACGGGGGGGATTGTTTGTCGTG
ATTTTCTGTCTGTGGTCTCGGGCCTGCGCGGATGCGTGTGTGGTTACTTC
CAGCCTGAATGGACAAGTGCGTAAATTCGTACAGAGAATTGATAAATCTT
GTAGTTGCTCTCCAATCAGTGTCTGCCACTAACGGCAGCTTTCATGTTAG
ATAGTGTGTGTTCAAGCCGCCTTTTTGGAGGGCTCGTTACTTTTCCCATC
GTACAGTATTGTTCACAATCAGTATGCAGATAATCGAAAATCGTTGCGTG
ACCCTTCAGGCTTGGACTGCAAATATGGGAACTCTGTCAAGACTCTCTCT
GCTAGGCTTTGTGTGGGCTCTATCATGTTGTCTTAGGTGATGTGTGTCCT
GTCGGGGGGGATTGTCCTTGCTTGAATCACCATCGCTCATCCCAAATTAT
GGCCGGTGTTACGATGGCGGCTATCCCCTATCCAGCGTGCTCCTTAAAGC
TTTGATGGCTGACCCCCTCCCTCCTTCATGCCCCCCCCCTCCCCGGCTAA
CCTGTCTAGATCTCAGTCGAGAGCCTGGGCAGCATACCTGGGGCAACAAC
CCTGGCTTTCTCTTCTCGGGACTCCTTCTACCCCTCCATCGCCATCGGGG
TGGTGCAAGACCCCCTTTCGGTGTCTGGGCTGAGGCACGCCGGCCGGTCC
CCCGGGAGCTGGGCATGGCTCAGTGACGGCACGCTGTGGCACAACGGTCA
GGAGCATGCGGCCTCGGCGGGGGTGGTACCAGCGCCAGACCATCGACAGG
GAGTCGCCGGCGTACACTCTGGGGATAGGGAATGGGACCCCCTCGAGGCC
CGGGAGAACCTGTCCACCGGGGACCTGGTGACCGTCATCCTAGACCTGGA
TGCAGGCACGTTGTCCCTGGCCTTCAATGGGCGCGTTCCCCAACTGCTGT
TCGGCCCTCCCGGCTCCGGGGCCAAGATTGAGATCCCTGTAGCGCCGGGC
ACGGCCACAGGACCAGACTCACGCTGCGCGGAGGGCCAGCAGGAATCTAA
GGAAGGCGACTTCCGGGTGTTCCCCGTCGTTTCCCTGAGGTCGTACGGAG
GTCGGGTCAAGGTGAAGGCCGGGGGTGTGTGCGGCAGCGTGTCGGTGCCG
TGGCTTCTTGACCTCGCGAAAACGGCCGCCTGGACGGGGGGAAGGCTCTC
GGCTGCGCTGGTGGCCAGTGCCTTGGTGGACCCCCGACAGGAGTTGGCAG
GGATGGACGGCGGCAGCTGGGCTCGCCGCAGGTGGCTCGACACCGCAGCC
TTTGTTGGAGGCCTGGAGACTCAGGAGGGAGGGGCCATGAGTTGGAAGAA
CCCGTGGTGGCCTGGTTCTCACCCAGTCAAGAGGTCAGGGGAGAAAGAGC
ACCATGCTAGGTCAGGGTCGGGGCAGGAAGTCTCTACTGGGGAGGCCTTT
GTCTCCGGTTCCATTAATGCCACCACATCCTCAGACACCCCTGCCCATGC
CCTTAGGTTCCTGAAGGCTGTGGCTTGGGGATTTGAGGACACGGCAGAAG
TGGATGACAGCAGCCACGAGCGAGACCCCACCGTCAACAGGACAGAGGGG
GAGGGTGGTGGCCCGGCCAGGGTGCTCCTGAACTGGCTCGAGGACGCGTG
CCCATTGACGTCCACGGAGGCAACCATACTGTCTCGCCTGAAGGGGGACG
GGGGGGAGCGCCACCTGAAGTCCTGCGAATACGCCTTTCTGGCGGCCTTG
CTGAAGCACACCGGGCTCTGGGCAGAGGCACTGGCGGCCCTGGAGGCAAT
TGGAGACGGGGGTGACCCTGGAGGGGGTATTCCACGGCAAGAGCAGGGAT
TGGTGGCAGAAGCGGGCGGGGGCCAGGGGATAGTTCCAGCCCCCTCAAAG
GCGATGCAAGCACTCTGGCGGCAGGTGCAGACGCTCAGGGCATACCTCTT
CCGGAGTCAGCACGCTTGTCGAAGCATGTCCCTGAAAGAGCTGAGGAACG
TTCTTCTGAGCGCTGGAGCTATGACGGGGGGTGGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig940:4609..6894+

>mRNA_D-mesarthrocarpus_Contig940.5.1 ID=mRNA_D-mesarthrocarpus_Contig940.5.1|Name=mRNA_D-mesarthrocarpus_Contig940.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1650bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig940:4609..6894+ (Discosporangium mesarthrocarpum MT17_79)
CCCGGGCCCGGGGGGTGTTGGTCCTCCCTCACCCTGGACCAGGGCTGCAC
GGCACAGCACGGGCAGGTCTGGTGCGGGGAAGGCGTCTTCAGCCATGTAG
ACAAGGAGAGGGACGGCGTGTGGGCCAGCGCCCCTGCCGTCTTGGGCCTT
AGGAGTGGGACACACGTGTGGCAGATCTCAGTCGAGAGCCTGGGCAGCAT
ACCTGGGGCAACAACCCTGGCTTTCTCTTCTCGGGACTCCTTCTACCCCT
CCATCGCCATCGGGGTGGTGCAAGACCCCCTTTCGGTGTCTGGGCTGAGG
CACGCCGGCCGGTCCCCCGGGAGCTGGGCATGGCTCAGTGACGGCACGCT
GTGGCACAACGGTCAGGAGCATGCGGCCTCGGCGGGGGTGGTACCAGCGC
CAGACCATCGACAGGGAGTCGCCGGCGTACACTCTGGGGATAGGGAATGG
GACCCCCTCGAGGCCCGGGAGAACCTGTCCACCGGGGACCTGGTGACCGT
CATCCTAGACCTGGATGCAGGCACGTTGTCCCTGGCCTTCAATGGGCGCG
TTCCCCAACTGCTGTTCGGCCCTCCCGGCTCCGGGGCCAAGATTGAGATC
CCTGTAGCGCCGGGCACGGCCACAGGACCAGACTCACGCTGCGCGGAGGG
CCAGCAGGAATCTAAGGAAGGCGACTTCCGGGTGTTCCCCGTCGTTTCCC
TGAGGTCGTACGGAGGTCGGGTCAAGGTGAAGGCCGGGGGTGTGTGCGGC
AGCGTGTCGGTGCCGTGGCTTCTTGACCTCGCGAAAACGGCCGCCTGGAC
GGGGGGAAGGCTCTCGGCTGCGCTGGTGGCCAGTGCCTTGGTGGACCCCC
GACAGGAGTTGGCAGGGATGGACGGCGGCAGCTGGGCTCGCCGCAGGTGG
CTCGACACCGCAGCCTTTGTTGGAGGCCTGGAGACTCAGGAGGGAGGGGC
CATGAGTTGGAAGAACCCGTGGTGGCCTGGTTCTCACCCAGTCAAGAGGT
CAGGGGAGAAAGAGCACCATGCTAGGTCAGGGTCGGGGCAGGAAGTCTCT
ACTGGGGAGGCCTTTGTCTCCGGTTCCATTAATGCCACCACATCCTCAGA
CACCCCTGCCCATGCCCTTAGGTTCCTGAAGGCTGTGGCTTGGGGATTTG
AGGACACGGCAGAAGTGGATGACAGCAGCCACGAGCGAGACCCCACCGTC
AACAGGACAGAGGGGGAGGGTGGTGGCCCGGCCAGGGTGCTCCTGAACTG
GCTCGAGGACGCGTGCCCATTGACGTCCACGGAGGCAACCATACTGTCTC
GCCTGAAGGGGGACGGGGGGGAGCGCCACCTGAAGTCCTGCGAATACGCC
TTTCTGGCGGCCTTGCTGAAGCACACCGGGCTCTGGGCAGAGGCACTGGC
GGCCCTGGAGGCAATTGGAGACGGGGGTGACCCTGGAGGGGGTATTCCAC
GGCAAGAGCAGGGATTGGTGGCAGAAGCGGGCGGGGGCCAGGGGATAGTT
CCAGCCCCCTCAAAGGCGATGCAAGCACTCTGGCGGCAGGTGCAGACGCT
CAGGGCATACCTCTTCCGGAGTCAGCACGCTTGTCGAAGCATGTCCCTGA
AAGAGCTGAGGAACGTTCTTCTGAGCGCTGGAGCTATGACGGGGGGTGGG
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