mRNA_D-mesarthrocarpus_Contig939.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig939.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig939.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 2.150e-45
Identity = 95/249 (38.15%), Postives = 135/249 (54.22%), Query Frame = 3
Query:  390 SRTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS--GLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            SR W+ HL   L+  GF    AD C+   I++  V   LV HV ++ + G  E CD   +  ++  P  NLG L WY+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +RELIG L+W+   +R D+++ VR +ARY   P + HW  G  IL Y++RT   GI++R+GS  GL +  F D+ YA    DR SVSGG +M  G  +S FSRTQ     +T +
Sbjct:   82 SRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTE 330          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5JSU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU5_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.360e-45
Identity = 99/237 (41.77%), Postives = 136/237 (57.38%), Query Frame = 3
Query:  393 RTWNMHLTATLVSFGFR*SEADPCLL-SYIDD*EVTFLVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGSGLQLYAFADSYAGDTNDRCSVSGGAIMFRGSAVSRFSRTQS 1100
            R W  H   TLV  GF   EADPC+    +D+  V  LV +V +++ AGS EDC+ L  +   E     LG   W+ GC  ERD E GTL ++Q+ YID + + FDV S+S +P + +    P +D E+      RE IG ++ V   SR DVS  VR +A ++  P+K HW    KIL YL  TR  GI+Y++GSGL+L  + D+   DT +R SVSG A M  G+ VS  S+T+S
Sbjct:  378 RPWGYHAAETLVENGFEQCEADPCIFRKMVDEVVVMILVIYVDDILVAGSDEDCEELLPSLQQEISHQKLGECEWFDGCATERDVEAGTLRISQTAYIDSMVKRFDVQSTSRIPASPSVDLGPERDDEKGGKCPVREAIGSMMCVSTFSRPDVSFAVRAVACHAHAPAKRHWDAIQKILGYLKETRDVGITYKRGSGLELAVYVDASYADTENRRSVSGLATMVGGTVVSHGSKTKS 614          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 3.790e-44
Identity = 95/249 (38.15%), Postives = 135/249 (54.22%), Query Frame = 3
Query:  390 SRTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS--GLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            SR W+ HL   L+  GF    AD C+   I++  V   LV HV ++ + G  E CD   +  ++  P  NLG L WY+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +RELIG L+W+   +R D+++ VR +ARY   P + HW  G  IL Y++RT   GI++R+GS  GL +  F D+ YA    DR SVSGG +M  G  +S FSRTQ     +T +
Sbjct:  256 SRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTE 504          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 3.630e-43
Identity = 95/249 (38.15%), Postives = 135/249 (54.22%), Query Frame = 3
Query:  390 SRTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS--GLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            SR W+ HL   L+  GF    AD C+   I++  V   LV HV ++ + G  E CD   +  ++  P  NLG L WY+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +RELIG L+W+   +R D+++ VR +ARY   P + HW  G  IL Y++RT   GI++R+GS  GL +  F D+ YA    DR SVSGG +M  G  +S FSRTQ     +T +
Sbjct:  777 SRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTE 1025          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5KYH9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH9_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 3.970e-43
Identity = 98/236 (41.53%), Postives = 131/236 (55.51%), Query Frame = 3
Query:  393 RTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTFLVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGSGLQLYAFADSYAGDTNDRCSVSGGAIMFRGSAVSRFSRTQS 1100
            R W  H   TLV  GF   +ADPC+   + D EV                 DC+ L  + + EFPT NLG   W+ GC +ERD   GTLT++Q+ Y+D + + FDV S+S +P +      P++D E+      RE IG ++WV   SR DVS  VR +AR++  P+K HW    KILRYL  TR  GI+Y++GSGL L  + D+   DT DR SVS  A    G+ VS  S+TQS
Sbjct:  624 RQWGYHAADTLVENGFEQCKADPCVFRKMVD-EVV----------------DCEELLASLNKEFPTKNLGECEWFDGCAIERDVAAGTLTISQTAYVDSMVKRFDVQSASRIPASPGVDLGPKRDDEKGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILRYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSRLAATVGGTVVSHGSKTQS 842          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5KKG5_9PHAE (Integrase catalytic domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG5_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 4.470e-39
Identity = 92/249 (36.95%), Postives = 131/249 (52.61%), Query Frame = 3
Query:  390 SRTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS--GLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            SR W+ HL   L+  GF    AD C+   I++  V   LV HV  + + G  E CD   +  ++  P  NLG L WY+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +R LIG L+W+   +R D+++ VR + RY   P + HW  G  IL Y++RT   GI++R+GS   L +  FAD+  A    DR SVSGG +M  G  +S FSRTQ     +T +
Sbjct:  807 SRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDFIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRGLIGSLMWLATQTRPDIANAVRAVERYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVARLSMEVFADADCARKAADRRSVSGGLVMCVGGCISWFSRTQKCVTLSTTE 1055          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5K9I1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I1_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.370e-38
Identity = 94/265 (35.47%), Postives = 135/265 (50.94%), Query Frame = 3
Query:  390 SRTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSW----------------YTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS--GLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            SR W+ HL   L+  GF    AD C+   I++  V   LV HV ++ + G  E CD   +  ++  P  NLG L W                Y+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +RELIG L+W+   +R D+++ VR +ARY   P + HW  G  IL Y++RT   G+++R+GS   L +  FAD+ YA    DR SVSGG +M  G  +S FSRTQ     +T +
Sbjct:  612 SRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTLVPVKNLGDLRWXXXXXXXXXXXXXXXXYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPIEIHWRAGIGILGYVVRTSDLGVTFRRGSVARLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTE 876          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.680e-38
Identity = 86/228 (37.72%), Postives = 124/228 (54.39%), Query Frame = 3
Query:  453 ADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS--GLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            AD C+   I++  V   LV HV ++ + G  E  D   +  ++     NLG L WY+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +RELIG L+W+   +R D+++ VR +ARY   P + HW  G  IL Y++RT   GI++R+GS  GL +  FAD+ YA    DR SVSGG +M  G  +S FSRTQ     +T +
Sbjct:    2 ADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERYDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTE 229          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5KSN7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSN7_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.410e-35
Identity = 87/252 (34.52%), Postives = 129/252 (51.19%), Query Frame = 3
Query:  390 SRTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVTF-LVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGS----GLQLYAFADSYAGDTNDRCSVSGGAIMFRGS------AVSRFSRTQSTWRW 1112
            SR W+ HL   L+  GF    AD C+   I++  V   LV HV ++++ G  E CD   +  ++  P  N G L WY+GC  ERDW+ GTL ++Q  Y ++L   F V     +P+    +       EE     +RELIG L+W+    R D+++ V+ +ARY   P + HW  G  IL Y++R    GI++R+GS    G+++ A AD  A    DR SVSGG +  R        AV+R+  +     W
Sbjct: 1343 SRQWHSHLARCLICLGFIQCLADTCVFRLIEEGRVVATLVVHVDDILSIGEEERCDQFGRDLNTMVPVKNRGDLRWYSGCLYERDWDAGTLKISQQTYAEELGMKFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQMRPDIANAVKAVARYCASPKEIHWRAGLGILGYVVRASDLGITFRRGSVAGLGMEVSADADD-ASKAADRRSVSGGLVXMRPDIANAVKAVARYCASPKEIHW 1593          
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 6.030e-35
Identity = 79/246 (32.11%), Postives = 132/246 (53.66%), Query Frame = 3
Query:  393 RTWNMHLTATLVSFGFR*SEADPCLLSYIDD*EVT-FLVPHVGNMIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQSPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLWVVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRKGSGLQLYAFADS-YAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATVQ 1124
            R W       L+S G+     DPC+   + D EV   +V +V +++ + + E+ + L  +    FP  +LG  +WY GC +E D E GT  ++Q+ YI+ +   F+V +++  P   ++   P++D E    +  RE IG L+W++FM R D++ P+  L + +  P++  W    +I+ YL  T+  GI+Y +GSGL L  F DS YA  T DR S +G A+   G+ V   ++TQ     +T +
Sbjct:   60 REWGFEAADALISNGYEQCRVDPCIFRKVVDGEVVGLIVIYVDDIMLSATEEEREELLASLQKRFPVKDLGDCTWYDGCAIEVDLENGTTKLSQTAYIESMLNRFNVTTTAPTPAVVDDDLGPKRDDESSVDKPVRETIGCLMWLLFM-RPDIALPLNKLQKIAHSPTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTE 304          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig939.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLN0_9PHAE2.150e-4538.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSU5_9PHAE2.360e-4541.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE3.790e-4438.15Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K2R1_9PHAE3.630e-4338.15Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KYH9_9PHAE3.970e-4341.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KKG5_9PHAE4.470e-3936.95Integrase catalytic domain-containing protein n=6 ... [more]
A0A6H5K9I1_9PHAE1.370e-3835.47Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KR24_9PHAE2.680e-3837.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSN7_9PHAE1.410e-3534.52Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KCN6_9PHAE6.030e-3532.11Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig939contigD-mesarthrocarpus_Contig939:17576..18708 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog67593.Physo137439
PFAMsRVT_2,Retrotran_gag_2,rve
Model size1133
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.68e-20
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHHC@4776|Peronosporales
Descriptiongag-polypeptide of LTR copia-type
Cds size612
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791092.4489582-CDS-D-mesarthrocarpus_Contig939:17575..181871680791092.4489582-CDS-D-mesarthrocarpus_Contig939:17575..18187Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig939 17576..18187 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791092.4608507-UTR-D-mesarthrocarpus_Contig939:18187..187081680791092.4608507-UTR-D-mesarthrocarpus_Contig939:18187..18708Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig939 18188..18708 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig939.7.1prot_D-mesarthrocarpus_Contig939.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig939 17576..18187 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig939.7.1

>prot_D-mesarthrocarpus_Contig939.7.1 ID=prot_D-mesarthrocarpus_Contig939.7.1|Name=mRNA_D-mesarthrocarpus_Contig939.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=204bp
MIAAGSGEDCDALCKAHSSEFPTNNLGLLSWYTGCTLERDWERGTLTVTQ
SPYIDQLSECFDVCSSSLLPVTANEQTLPRQDKEEPEPECYRELIGPLLW
VVFMSRLDVSSPVRVLARYSQDPSKTHWPQGFKILRYLIRTRTWGISYRK
GSGLQLYAFADSYAGDTNDRCSVSGGAIMFRGSAVSRFSRTQSTWRWATV
QRN*
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mRNA from alignment at D-mesarthrocarpus_Contig939:17576..18708-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig939.7.1 ID=mRNA_D-mesarthrocarpus_Contig939.7.1|Name=mRNA_D-mesarthrocarpus_Contig939.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1133bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig939:17576..18708- (Discosporangium mesarthrocarpum MT17_79)
GAGTTCACAGGACTCCAGAATAGAGATGCTGTTTCCCCCGCTGAGTTGCC CCCGGATAGAAAGGCCAAAGGAGCAAAGTGGATGTACAAGTGGAAAACCG ATGAGATGGGAGTAATCCCAAGCCAATGCTAGGCCAGTGGCAGAATTTTT TAATCAGAAGCTAGGAGTCGACTACTATGAGACATTTGCCCCTACCCCTG CCGCATCAACTGTACATCTTCTAATAGCAGTTGCCGACGAGTGTGGGCTG GAACGAATGCACTTCGACGCAGAGCAAGCATTTCTCTACATGCAGACATA GACACAGAAATATTTGTACGACTTTCCGAGGGGTGTGGTGATCTGAGTGG TAAAACCGCACGTCTTCACCGAGCCTCGTCTGGGTGCAAAGTCGTACCTG GAATATGCATCTCACTGCAACGCTAGTGTCTTTTGGTTTTAGGTAGTCTG AAGCTGACCCTTGCCTACTAAGTTACATAGATGATTAAGAGGTCACTTTT CTTGTTCCACATGTAGGCAACATGATTGCTGCCGGCTCTGGGGAGGACTG TGATGCGCTCTGTAAGGCTCACTCATCTGAGTTCCCTACCAACAACCTAG GACTTCTGAGTTGGTATACAGGCTGCACCTTGGAGAGAGATTGGGAACGG GGTACATTGACCGTCACGCAGTCTCCGTACATTGATCAACTATCTGAGTG CTTTGACGTGTGCTCTTCTAGTCTGTTGCCCGTCACTGCAAACGAGCAGA CCCTGCCCAGACAGGATAAAGAGGAACCTGAACCGGAGTGCTACAGAGAA CTCATTGGCCCCCTCCTGTGGGTAGTGTTTATGTCCCGCCTGGACGTATC TAGCCCAGTCCGAGTGCTAGCGAGATACTCACAAGACCCCAGCAAGACCC ACTGGCCTCAAGGATTCAAGATACTACGATACCTAATCAGGACCCGGACG TGGGGCATAAGCTATCGGAAGGGGTCTGGACTGCAGCTATATGCCTTTGC TGACTCCTATGCTGGGGACACTAACGATAGATGCTCAGTGTCTGGGGGGG CAATAATGTTTAGGGGTTCGGCGGTATCACGGTTTTCGAGGACACAGAGT ACATGGCGATGGGCGACTGTGCAAAGGAACTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig939:17576..18708-

>mRNA_D-mesarthrocarpus_Contig939.7.1 ID=mRNA_D-mesarthrocarpus_Contig939.7.1|Name=mRNA_D-mesarthrocarpus_Contig939.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=612bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig939:17576..18708- (Discosporangium mesarthrocarpum MT17_79)
ATGATTGCTGCCGGCTCTGGGGAGGACTGTGATGCGCTCTGTAAGGCTCA
CTCATCTGAGTTCCCTACCAACAACCTAGGACTTCTGAGTTGGTATACAG
GCTGCACCTTGGAGAGAGATTGGGAACGGGGTACATTGACCGTCACGCAG
TCTCCGTACATTGATCAACTATCTGAGTGCTTTGACGTGTGCTCTTCTAG
TCTGTTGCCCGTCACTGCAAACGAGCAGACCCTGCCCAGACAGGATAAAG
AGGAACCTGAACCGGAGTGCTACAGAGAACTCATTGGCCCCCTCCTGTGG
GTAGTGTTTATGTCCCGCCTGGACGTATCTAGCCCAGTCCGAGTGCTAGC
GAGATACTCACAAGACCCCAGCAAGACCCACTGGCCTCAAGGATTCAAGA
TACTACGATACCTAATCAGGACCCGGACGTGGGGCATAAGCTATCGGAAG
GGGTCTGGACTGCAGCTATATGCCTTTGCTGACTCCTATGCTGGGGACAC
TAACGATAGATGCTCAGTGTCTGGGGGGGCAATAATGTTTAGGGGTTCGG
CGGTATCACGGTTTTCGAGGACACAGAGTACATGGCGATGGGCGACTGTG
CAAAGGAACTGA
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