mRNA_D-mesarthrocarpus_Contig938.3.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A6H5KW76_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW76_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.690e-42 Identity = 73/130 (56.15%), Postives = 100/130 (76.92%), Query Frame = 2
Query: 116 EGETGTLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEK-----MPLLYGIIDMLKRWR 490
EG GT+++L+ A+ E L+H GVLGK++A++RA V+ L+GP +GVL P++N+NLLINEL+RDY+ YN Y NAL VF+AESGQP +R+LDR F+RDELG++E R +T+ +PLLYGI LKR R
Sbjct: 16 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQEGVLPTPLSNENLLINELVRDYLSYNGYSNALGVFMAESGQPIERSLDRGFIRDELGLSERRDSTDHGSARPLPLLYGITHALKRRR 145
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: D7FVJ9_ECTSI (Similar to chemokine (C-C motif) receptor 6a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ9_ECTSI) HSP 1 Score: 146 bits (369), Expect = 2.820e-41 Identity = 73/130 (56.15%), Postives = 97/130 (74.62%), Query Frame = 2
Query: 116 EGETGTLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTE-----DRTATEKMPLLYGIIDMLKRWR 490
EG GT+++L+ A+ E L+H GVLGK++A++RA V+ L+GP + VL P++NDNLLINEL+RDY+ YN Y NAL VF+AESGQP +R+LDR F+RDELG++E DR +PLLYGI LKR R
Sbjct: 16 EGGDGTIDDLKQALVENLEHRGVLGKLRAKVRAEVFHTLEGPQERVLPTPLSNDNLLINELVRDYLSYNGYANALGVFMAESGQPIERSLDRGFIRDELGLSERLDSIDRGGARPLPLLYGITHALKRRR 145
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A835YQT6_9STRA (LisH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT6_9STRA) HSP 1 Score: 127 bits (320), Expect = 7.360e-34 Identity = 66/151 (43.71%), Postives = 99/151 (65.56%), Query Frame = 2
Query: 80 KYLYPMQSDAKDEGETGTLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLH--PPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTE--DRTATEKMPLLYGIIDMLKRWRAGDRENGVQE 520
+ L + + EG GTL++L+ A+ + L+ +G LGK++A++RA V+ L+ PP++N NL+INELIRDY YN Y +ALSVFL+ES QP+D +L R F+RDELGV+E D +++PLLYGI+ ML++W+ + E
Sbjct: 6 QVLEADDAPLQQEGAAGTLDDLKDALVDALESSGALGKLRARVRAEVFKSLEPEELATRETAPPLSNANLIINELIRDYFEYNGYSHALSVFLSESCQPDDASLSRGFIRDELGVSEELDSARQKQLPLLYGILHMLQKWKRDSEQQPALE 156
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A024GKL4_9STRA (LisH domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKL4_9STRA) HSP 1 Score: 115 bits (288), Expect = 9.090e-30 Identity = 63/130 (48.46%), Postives = 91/130 (70.00%), Query Frame = 2
Query: 131 TLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEKMPLLYGIIDMLKRWRAGDRENGVQE 520
+L EL+ +KETL+ G LG+IKA+IRA ++ L S + P ++N+NL++NELIR+Y+ YN Y +ALSVFL ESGQP ++A R+FL ELGV ED T+ +PLLY I+ +L++ R + + G QE
Sbjct: 7 SLSELKEVLKETLETRGCLGQIKARIRAEIFSALDDQS--IPKPELSNENLILNELIREYLEYNGYRHALSVFLPESGQPTEKAFPRSFLSSELGVREDARFTQ-IPLLYNILFILQQRRENNAK-GAQE 132
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A1V9YC06_9STRA (LisH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YC06_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.880e-29 Identity = 61/130 (46.92%), Postives = 88/130 (67.69%), Query Frame = 2
Query: 122 ETGTLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEKMPLLYGIIDMLKRWRAGDRENG 511
ET +L +L+ A+KETL+ G LG IKA++RA ++ L +G P ++N+NL+INELIR+Y+ YN Y + LSVFL ESGQP +R R FL EL +TED + +PLLYGI+ L+ +A ++ +G
Sbjct: 3 ETLSLADLKDALKETLEARGTLGPIKARLRAEIFQALD---EGATKPKLSNENLIINELIREYLEYNGYRHTLSVFLPESGQPQERPFQRRFLAHELNITEDPRYNQ-VPLLYGIVTALQDAKASNQGDG 128
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A1S3I2D6_LINUN (lisH domain-containing protein FOPNL n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I2D6_LINUN) HSP 1 Score: 112 bits (280), Expect = 2.620e-28 Identity = 59/113 (52.21%), Postives = 83/113 (73.45%), Query Frame = 2
Query: 134 LEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATE-KMPLLYGII 469
L+EL+ VKETL+ GVLG+IKA++RA V++ L +D PP++N+N++INELIR+Y+ YN+Y SV LAE+GQP L+R FL ++L V ED+TA+ K+PLLY II
Sbjct: 4 LQELKTVVKETLEKRGVLGQIKARVRAEVFNALDDQADP--RPPLSNENMIINELIREYLEYNKYKYTASVMLAETGQPKT-PLNREFLAEQLNVVEDKTASSLKLPLLYSII 113
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A8B7Y9V1_ACAPL (lisH domain-containing protein FOPNL-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y9V1_ACAPL) HSP 1 Score: 112 bits (279), Expect = 4.020e-28 Identity = 59/113 (52.21%), Postives = 83/113 (73.45%), Query Frame = 2
Query: 131 TLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEKMPLLYGII 469
+++EL+ ++ETL+ GVLG+IKA++RA V+ L SD PP++N+N+LINELIR+Y+ +N+Y A SV +AESGQP LDR FL +EL +TEDR T +PLLYGI+
Sbjct: 3 SVQELKSVLRETLETRGVLGQIKARVRAEVFHALDDQSDP--RPPLSNENMLINELIREYLEFNKYKYAASVLMAESGQPQT-PLDREFLVNELNITEDRD-TATVPLLYGIL 111
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: UPI0001CB9CE3 (lisH domain-containing protein FOPNL-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9CE3) HSP 1 Score: 112 bits (279), Expect = 4.130e-28 Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 2
Query: 131 TLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEKMPLLYGII 469
T++EL+ +KETL++ GVLG+I+A++RA V++ L +D PP++N+N+LINEL+R+Y+ +N+Y SV LAESGQP LDR FL +EL +T DR T +PLLYGII
Sbjct: 3 TIQELKSVLKETLENRGVLGQIQARVRAEVFNALDDQTDP--RPPLSNENMLINELVREYLQFNKYKYTESVLLAESGQPTT-PLDRQFLTNELNITADRD-TASVPLLYGII 111
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: UPI001BB1D324 (centrosomal protein 20-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1D324) HSP 1 Score: 110 bits (276), Expect = 1.130e-27 Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 2
Query: 137 EELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEKMPLLYGII 469
+EL+ VKETL++NGVLG+IKA++RA V+ L P+ PP++N+N+LINELIR+Y+ +N Y SV L+ESGQP LDR FL EL + EDR T +PLLYGI+
Sbjct: 5 QELKAVVKETLENNGVLGEIKARVRAEVFRALDDPNQR--KPPLSNENMLINELIREYLEFNHYKYTSSVLLSESGQPTT-PLDRQFLATELNLVEDRN-TSSIPLLYGIL 111
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Match: A0A8C4STF1_ERPCA (FGFR1OP N-terminal like n=2 Tax=Polypteridae TaxID=8289 RepID=A0A8C4STF1_ERPCA) HSP 1 Score: 110 bits (274), Expect = 1.310e-27 Identity = 61/128 (47.66%), Postives = 90/128 (70.31%), Query Frame = 2
Query: 131 TLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSDGVLHPPMANDNLLINELIRDYMVYNRYDNALSVFLAESGQPNDRALDRTFLRDELGVTEDRTATEKMPLLYGIIDMLKRWRAGDRENGV 514
T+ EL+ A+KETLD GVLG++KA+IRA V++ L S+ PP++++NLL+NELIR+Y+ +N+Y SV AESGQP + LDR F+ +EL VTED +A +PLLYG++ + + G+R N +
Sbjct: 3 TIAELKAALKETLDSRGVLGQLKARIRAEVFNALDDQSES--KPPLSHENLLVNELIREYLEFNKYRYTASVLTAESGQP-EVPLDRQFILNELNVTEDASA-RSVPLLYGMLAHFLQEK-GERGNRI 125 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig938.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig938.3.2 >prot_D-mesarthrocarpus_Contig938.3.2 ID=prot_D-mesarthrocarpus_Contig938.3.2|Name=mRNA_D-mesarthrocarpus_Contig938.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=142bp MQSDAKDEGETGTLEELEGAVKETLDHNGVLGKIKAQIRAAVYDVLQGPSback to top mRNA from alignment at D-mesarthrocarpus_Contig938:18938..20001- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig938.3.2 ID=mRNA_D-mesarthrocarpus_Contig938.3.2|Name=mRNA_D-mesarthrocarpus_Contig938.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1064bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig938:18938..20001- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig938:18938..20001- >mRNA_D-mesarthrocarpus_Contig938.3.2 ID=mRNA_D-mesarthrocarpus_Contig938.3.2|Name=mRNA_D-mesarthrocarpus_Contig938.3.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=426bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig938:18938..20001- (Discosporangium mesarthrocarpum MT17_79)back to top |