mRNA_D-mesarthrocarpus_Contig938.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig938.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig938.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: D8LHX2_ECTSI (Serine/threonine protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX2_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.050e-22
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 1
Query:    1 PEGFSTCGTT-AVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
            P  FSTCGTT ++IV+++++ IIC NTGDSRAVLASEG S  +S DHKP+N  E+ R  AAGG V+HNR+ G+LA+SR
Sbjct:  306 PTRFSTCGTTTSLIVVVSDAFIICCNTGDSRAVLASEGASRQLSVDHKPDNRAERQRIEAAGGKVEHNRVEGKLAVSR 383          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: A0A7S4HI83_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HI83_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 2.090e-19
Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 1
Query:    4 EGFSTCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
             G    G+T+V+ +L+  HI+C+NTGDSRAVLA  G S  +S DHKP  P EK R  AAGG VK NR+NG LA+SR
Sbjct:  122 SGQDQSGSTSVMTLLSPRHIVCANTGDSRAVLARAGTSVTLSNDHKPYLPGEKERIEAAGGQVKFNRVNGDLAVSR 197          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: A0A7S0LP81_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LP81_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 2.430e-18
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    4 EGFSTCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
             G    G+T+V+ +++  H+IC+NTGDSRAVL+  G +  +S DHKP NP EK R   AGGTVK NR+NG LA+SR
Sbjct:  120 SGQDQSGSTSVMTLVSPRHVICANTGDSRAVLSRSGQAVALSHDHKPFNPGEKERIENAGGTVKFNRVNGDLAVSR 195          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: F0W2P8_9STRA (Protein phosphatase 2C putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2P8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.290e-18
Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 1
Query:   16 TCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
            TCG+T++  I+T  HII +N GDSR+VL  +G + PMS DHKP N  E+ R   AGGTV++NR+NG LA+SR
Sbjct:  123 TCGSTSISAIITSKHIIVANVGDSRSVLGKDGKTVPMSFDHKPANAEERNRIVKAGGTVRNNRVNGDLAVSR 194          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: A0A7S2KRF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRF4_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 5.020e-18
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query:   22 GTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
            GTT VIV++T  HI+C+N GDSRA+LA  GV+ P+S DHKP N +E  R   +GG VK+ R++G LA+SR
Sbjct:    2 GTTGVIVLVTPHHIVCANAGDSRAILARNGVALPLSFDHKPANDVEVVRVDKSGGYVKNGRVDGDLAVSR 71          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: G0TVE0_TRYVY (PPM-type phosphatase domain-containing protein n=1 Tax=Trypanosoma vivax (strain Y486) TaxID=1055687 RepID=G0TVE0_TRYVY)

HSP 1 Score: 85.5 bits (210), Expect = 7.750e-18
Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 1
Query:   22 GTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
            G TAV V +T   I C++ GDSRAVL  EG +  +S+DHKPEN LE+ R  AAGGTV  NR+NG+LAMSR
Sbjct:  227 GCTAVSVHITPQRITCASVGDSRAVLCREGSAVALSEDHKPENTLERERIEAAGGTVSDNRVNGQLAMSR 296          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: W4H2F1_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H2F1_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.010e-17
Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    4 EGFSTCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
             G    G TA+   + ++HI+ +N+GDSR+VLA++G   PMS DHKP NP E+ R   AGG+V++NR+NG LA+SR
Sbjct:  114 SGDDHSGCTAIAAFINDTHIVVANSGDSRSVLATDGGVVPMSYDHKPNNPGERQRIENAGGSVRNNRVNGDLAVSR 189          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: A0A6G0WXM2_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXM2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.110e-17
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 1
Query:    4 EGFSTCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
             G    G TA+  ++T++HII SN+GDSR+VLAS+G   PMS DHKP N  E+ R   AGG+V++NR+NG LA+SR
Sbjct:  114 NGEDHSGCTAIAAVITDTHIIVSNSGDSRSVLASDGGVVPMSFDHKPNNLPERKRIENAGGSVRNNRVNGDLAVSR 189          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: A0A8H2Y426_9AGAM (Hypothetical protein (Fragment) n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H2Y426_9AGAM)

HSP 1 Score: 81.6 bits (200), Expect = 2.160e-17
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 1
Query:   22 GTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
            G TAV  +LTE  I+ +N GDSR+V++ +GV   +S DHKP+NP E AR +AAGG V++NR+NG LA+SR
Sbjct:   90 GCTAVAALLTEDKILVANAGDSRSVMSVKGVVKELSFDHKPQNPSETARITAAGGYVEYNRVNGNLALSR 159          
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Match: W4H0A2_9STRA (PPM-type phosphatase domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0A2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.910e-17
Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    4 EGFSTCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPENPLEKARCSAAGGTVKHNRINGRLAMSR 231
             G    G TA+   + ++HI+ +N+GDSR+VLA++G   PMS DHKP NP E+ R   AGG+V++NR+NG LA+SR
Sbjct:  114 SGDDHSGCTAIAAFINDTHIVVANSGDSRSVLATDGGVVPMSYDHKPNNPGERQRIENAGGSVRNNRVNGDLAVSR 189          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig938.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHX2_ECTSI2.050e-2261.54Serine/threonine protein phosphatase n=1 Tax=Ectoc... [more]
A0A7S4HI83_9EUKA2.090e-1956.58Hypothetical protein (Fragment) n=1 Tax=Prymnesium... [more]
A0A7S0LP81_9EUKA2.430e-1853.95Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
F0W2P8_9STRA4.290e-1855.56Protein phosphatase 2C putative n=1 Tax=Albugo lai... [more]
A0A7S2KRF4_9STRA5.020e-1855.71Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
G0TVE0_TRYVY7.750e-1860.00PPM-type phosphatase domain-containing protein n=1... [more]
W4H2F1_9STRA1.010e-1750.00PPM-type phosphatase domain-containing protein n=1... [more]
A0A6G0WXM2_9STRA1.110e-1753.95PPM-type phosphatase domain-containing protein n=1... [more]
A0A8H2Y426_9AGAM2.160e-1755.71Hypothetical protein (Fragment) n=1 Tax=Rhizoctoni... [more]
W4H0A2_9STRA3.910e-1750.00PPM-type phosphatase domain-containing protein n=7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig938contigD-mesarthrocarpus_Contig938:11632..12356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LHX2
PFAMsPP2C
Model size234
Max annot lvl2759|Eukaryota
KEGG koko:K01090,ko:K04457,ko:K14803,ko:K17499,ko:K19705
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.36e-23
EggNOG OGsCOG0631@1|root,KOG0698@2759|Eukaryota
Ec32 ortholog descriptionSerine/threonine protein phosphatase
Ec32 orthologEc-18_000810.1
EC3.1.3.16
Descriptionprotein serine/threonine phosphatase activity
Cds size234
COG categoryT
BRITEko00000,ko00001,ko01000,ko01009,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791091.7143476-CDS-D-mesarthrocarpus_Contig938:11631..116911680791091.7143476-CDS-D-mesarthrocarpus_Contig938:11631..11691Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig938 11632..11691 -
1680791091.7331815-CDS-D-mesarthrocarpus_Contig938:12182..123561680791091.7331815-CDS-D-mesarthrocarpus_Contig938:12182..12356Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig938 12183..12356 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig938.2.1prot_D-mesarthrocarpus_Contig938.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig938 11632..12356 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig938.2.1

>prot_D-mesarthrocarpus_Contig938.2.1 ID=prot_D-mesarthrocarpus_Contig938.2.1|Name=mRNA_D-mesarthrocarpus_Contig938.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=78bp
PEGFSTCGTTAVIVILTESHIICSNTGDSRAVLASEGVSTPMSQDHKPEN
PLEKARCSAAGGTVKHNRINGRLAMSR*
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mRNA from alignment at D-mesarthrocarpus_Contig938:11632..12356-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig938.2.1 ID=mRNA_D-mesarthrocarpus_Contig938.2.1|Name=mRNA_D-mesarthrocarpus_Contig938.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=725bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig938:11632..12356- (Discosporangium mesarthrocarpum MT17_79)
CCAGAGGGGTTCTCAACTTGCGGGACAACGGCTGTGATCGTGATCCTCAC GGAGAGTCACATCATTTGCAGCAACACGGGGGACTCAAGGGCCGTCTTGG CCAGCGAGGGAGTGTCCACACCCATGTCCCAGGACCATAAGCCAGAGAAC CCCTTGGAAAAAGCAAGGTGCAGCGTGCTACAGCAGAGCTTCCCCTGTAC GCAGACGGCCTCGATCGATGTTGGTAAAGAAACCGAACTGAGCTGGTTAT TGTTGTTTCAACTTTATCTTGGTAAAACGACTTCAGTTCTGGCTGGGCGA CAGCCGATGTTGGAATTCACGGCAAGTGGTGCAAAAAACAAGTGTGACAC AAGGATGCGATTTCCCGTTGCAGTGTAGGCAGAGCATTTTGTGCCCTCTC ACTTTCCAGCAGCAACCACAGCAGTACTCACCGGGATCGCGGAAGCACTC TCATCCCTAACCCCAATCCTTAGTACACTCGAACCCGCGCGCCCGCGCCC TTGTTCTATTGGCTGAGCTCTCCGCCGTTGAGAAACTTGCCTACCTACAT CCGTGCGCGTGCTCTTTTTTTTCCTGCGGCTGATCATGATCTCTGATGAC CAGATTTTCTGTATCGCTTTCTCTCTTTCTCCTTTCTTGTTTGCAATGGA AAAAAAAGGATCGAGGCCGCTGGGGGCACAGTGAAGCATAACCGAATCAA CGGCAGGCTGGCCATGTCCAGGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig938:11632..12356-

>mRNA_D-mesarthrocarpus_Contig938.2.1 ID=mRNA_D-mesarthrocarpus_Contig938.2.1|Name=mRNA_D-mesarthrocarpus_Contig938.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=234bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig938:11632..12356- (Discosporangium mesarthrocarpum MT17_79)
CCAGAGGGGTTCTCAACTTGCGGGACAACGGCTGTGATCGTGATCCTCAC
GGAGAGTCACATCATTTGCAGCAACACGGGGGACTCAAGGGCCGTCTTGG
CCAGCGAGGGAGTGTCCACACCCATGTCCCAGGACCATAAGCCAGAGAAC
CCCTTGGAAAAAGCAAGGTGCAGCGCCGCTGGGGGCACAGTGAAGCATAA
CCGAATCAACGGCAGGCTGGCCATGTCCAGGTAG
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