mRNA_D-mesarthrocarpus_Contig9375.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9375.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9375.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A836CAE6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAE6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.480e-27
Identity = 77/212 (36.32%), Postives = 97/212 (45.75%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGI----------------------CPCCKQEGYLLFTPGAVAWASNL-------------------------------------------LCCLLGAGASVLSCLSVEEWTWESPVAYNEGAAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            +L +YV +  PS+PGGDSGELLAEAC LG  HPPG                        P    +   + T GAV W +NL                                           L C  GAGA+    L+VE WT     A+  GAA A+++LFAL P+ WEYS GTEVFALNN L+A  +  + R+ R PS RAA  GA++
Sbjct:   59 ILAVYVRSVRPSVPGGDSGELLAEACGLGTAHPPGYPLFTLLHHAVYRAAPLLRRFTPSPPAAAKHCPIVTSGAVVWGANLTRAPPLVLAFPHSHICXXXXXXXXXXXXXXXXXXXXXXXXXXLLACAFGAGAAAALALAVEVWT-AGTRAHCPGAAAAAAVLFALSPLTWEYSVGTEVFALNNLLLALLLLASARLHRAPSARAAARGALL 269          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: K3WD47_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD47_GLOUD)

HSP 1 Score: 110 bits (276), Expect = 1.910e-25
Identity = 63/156 (40.38%), Postives = 86/156 (55.13%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLL---------FTPGAVAWASNLLCCLLGAGASVLSCLSVEEWTWESPVAYNEGAAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            VLG+YV T +PS+ GGDSGEL+AE+CHLG+ HPPG  P      +           +T   VAW +NL   +    A+V+   S+  +   S  A    AA +++ LFAL P+ W Y+ G EVFALNN   A  +YL +R      L+ A +GA V
Sbjct:   52 VLGVYVKTLYPSVAGGDSGELVAESCHLGVSHPPGY-PLFNMAVHTFVNVLSLLPWWTATTVAWRANLFSAICDTLAAVMIYASILHYAQASTDATRHTAAFSAAALFALSPLTWTYAVGAEVFALNNLFAALLVYLLLRYDTTRRLQDATMGAFV 206          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A2R5GQE8_9STRA (Transmembrane protein 260 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQE8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.290e-24
Identity = 70/154 (45.45%), Postives = 83/154 (53.90%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT------------PGAVAWASNLLCCLLGA-GASVLSCLSVEEWTWESPVAYNEGAAMASSLL--FALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLR 417
            V G Y+ TAF SIPGGDSGEL+AEAC LG  HPPG         Y LFT            PG+ AW +N   C+LGA  A VL    VE           E A +++ L   +AL P+VW YSTG EVFALNN LV   ++LT+R     S R
Sbjct:   21 VAGAYLKTAFASIPGGDSGELVAEACTLGHAHPPG---------YPLFTLLYHAIVHQQELPGSPAWRANATTCILGALAAGVLQACGVELIAHYGITPRLEHAILSAGLATAYALSPLVWLYSTGAEVFALNNLLVVVLLWLTLRYLGATSSR 165          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A7S4KAE7_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KAE7_GUITH)

HSP 1 Score: 102 bits (255), Expect = 4.730e-24
Identity = 65/149 (43.62%), Postives = 80/149 (53.69%), Query Frame = 1
Query:    4 LGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYL--LFTPGAVAWASNLLCCLLGAG-ASVLSCLSVEEWTWESPVAYNEGAAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            L LY+ T +P +PGGDSGEL+A A  LG+ HPPG       E     L   G VAW  N+   ++GA  A +L   +V  W        +   A+ +S LFAL P+VW YST  EVF LNN LV   +YLTVR   R     AR GA V
Sbjct:   67 LTLYLSTLYPHVPGGDSGELIASAFQLGVGHPPGYPLFMVYEKIFSSLLHFGNVAWRMNVGMAVVGASSAGMLYMTAVHAWD-------SRPLAILASGLFALNPIVWNYSTHAEVFPLNNLLVCLLLYLTVRYMERREASVARWGAFV 208          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A397B1Y3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B1Y3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 5.500e-24
Identity = 66/164 (40.24%), Postives = 90/164 (54.88%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT-PGAV--AWASNL-------LCCLLGAGASVLSCLSVEEWTWESPVAYNEG-------AAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            VLG+Y  T +PSI GGDSGEL+AE+CHLG+ HPPG  P      YL+   PGA   AW +NL       +CC+    A++L        TW SP + +         AA  +S+ FAL P++W Y+   EVFALNN   A  ++L +   +  S+  A +GA V
Sbjct:   65 VLGVYSQTIYPSIAGGDSGELVAESCHLGVSHPPGY-PLFNMLNYLVVNMPGAQTKAWKANLFSAVCDTICCMF-MYATIL--------TWTSPASSSTASAWLTKVAAATASITFALSPLIWTYAISAEVFALNNLFAAWLLFLLLSYAQSGSVYYANLGAFV 218          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A3R6YY23_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YY23_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.440e-24
Identity = 56/153 (36.60%), Postives = 87/153 (56.86%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT-PG--AVAWASNLLCCLLGAGASVLSCLSVEEWTWESP---VAYNEGAAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            +LG+Y  T +PSI GGDSGEL+AE+CHLG+ HPPG  P      +++   PG    AW +NL          +L   ++  WT ++P   +   + AA  +++ FAL P++W Y+   EVF++NN   A  I++ +R  +  S+  A +GA V
Sbjct:   44 ILGVYSQTLYPSIAGGDSGELVAESCHLGVSHPPGY-PLFNMLNFVVVNMPGQQTKAWKANLFSAACDTVCCMLMYATIVSWTAQAPSPSLWLTKVAAATAAVTFALSPLIWTYAISAEVFSMNNLFAAWLIFVLLRYAQSGSMNHANLGAFV 195          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A6A5AGH2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AGH2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.210e-23
Identity = 66/164 (40.24%), Postives = 90/164 (54.88%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT-PGAV--AWASNL-------LCCLLGAGASVLSCLSVEEWTWESPVAYNEG-------AAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            VLG+Y  T +PSI GGDSGEL+AE+CHLG+ HPPG  P      YL+   PGA   AW +NL       +CC+    A++L        TW SP + +         AA  +S+ FAL P++W Y+   EVFALNN   A  ++L +   +  S+  A +GA V
Sbjct:   45 VLGVYSQTIYPSIAGGDSGELVAESCHLGVSHPPGY-PLFNMLNYLVVNMPGAQTKAWKANLFSAVCDTICCMF-MYATIL--------TWTSPASSSTASAWLTKVAAATASITFALSPLIWTYAISAEVFALNNLFAAWLLFLLLSYAQSGSVYYANLGAFV 198          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A3R7WK00_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WK00_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.890e-23
Identity = 62/157 (39.49%), Postives = 87/157 (55.41%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT-PGAV--AWASNLLCCLLGAGASVLSCLSVEEWTWESPVAYNEG-------AAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            VLG+Y  T +PSI GGDSGEL+AE+CHLG+ HPPG  P      YL+   PGA   AW +NL   +      +    ++ +WT  SP + +         AA  +S+ FAL P++W Y+   EVFALNN   A  ++L +   +  S+  A +GA V
Sbjct:   45 VLGVYSQTIYPSIAGGDSGELVAESCHLGVSHPPGY-PLFNMLNYLVVNMPGAQTKAWKANLFSAVCDTICCMFMYATILKWT--SPASSSTASAWLTKVAAATASITFALSPLIWTYAISAEVFALNNLFAAWLLFLLLSYAQSGSVYYANLGAFV 198          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A3L6UQT5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UQT5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.300e-23
Identity = 66/164 (40.24%), Postives = 90/164 (54.88%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT-PGAV--AWASNL-------LCCLLGAGASVLSCLSVEEWTWESPVAYNEG-------AAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV 441
            VLG+Y  T +PSI GGDSGEL+AE+CHLG+ HPPG  P      YL+   PGA   AW +NL       +CC+    A++L        TW SP + +         AA  +S+ FAL P++W Y+   EVFALNN   A  ++L +   +  S+  A +GA V
Sbjct:   65 VLGVYSQTIYPSIAGGDSGELVAESCHLGVSHPPGY-PLFNMLNYLVVNMPGAQTKAWKANLFSAVCDTICCMF-MYATIL--------TWTSPASSSTASAWLTKVAAATASITFALSPLIWTYAISAEVFALNNLFAAWLLFLLLSYAQSGSVYYANLGAFV 218          
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Match: A0A6G0WS99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS99_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.800e-23
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 1
Query:    1 VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFT-PGAV--AWASNLLCCLLGAGASVLSCLSVEEWTWESPVA---YNEGAAMASSLLFALGPVVWEYSTGTEVFALNNFLVAAAIY 381
            VLG+Y  T +PSIPGGDSGEL+AE+CHLG+ HPPG  P      YL+   PG+   AW +NL       G S+L    +  W  +S ++     + AA  +S+ FA  P++W Y+ G EVFA+NN   A  ++
Sbjct:   46 VLGVYSQTLYPSIPGGDSGELVAESCHLGVSHPPGY-PIFNMINYLVVNIPGSAPKAWKANLFSAACDTGCSMLIYTMILNWQ-DSAISEKWLTKTAAATASVAFAWSPLIWTYAVGAEVFAMNNLFAALLLW 176          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9375.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAE6_9STRA6.480e-2736.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WD47_GLOUD1.910e-2540.38Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2R5GQE8_9STRA2.290e-2445.45Transmembrane protein 260 n=1 Tax=Hondaea fermenta... [more]
A0A7S4KAE7_GUITH4.730e-2443.62Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A397B1Y3_9STRA5.500e-2440.24Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A3R6YY23_9STRA7.440e-2436.60Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A5AGH2_9STRA1.210e-2340.24Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A3R7WK00_9STRA4.890e-2339.49Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A3L6UQT5_9STRA6.300e-2340.24Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0WS99_9STRA6.800e-2342.11Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9375contigD-mesarthrocarpus_Contig9375:2582..3344 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G812
PFAMsDUF2723
Model size441
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.36e-35
EggNOG OGs2CXJ8@1|root,2RXZ8@2759|Eukaryota
Cds size441
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791091.342527-CDS-D-mesarthrocarpus_Contig9375:2581..27241680791091.342527-CDS-D-mesarthrocarpus_Contig9375:2581..2724Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9375 2582..2724 +
1680791091.3665462-CDS-D-mesarthrocarpus_Contig9375:3046..33441680791091.3665462-CDS-D-mesarthrocarpus_Contig9375:3046..3344Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9375 3047..3344 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9375.2.1prot_D-mesarthrocarpus_Contig9375.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9375 2582..3344 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9375.2.1

>prot_D-mesarthrocarpus_Contig9375.2.1 ID=prot_D-mesarthrocarpus_Contig9375.2.1|Name=mRNA_D-mesarthrocarpus_Contig9375.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=147bp
VLGLYVWTAFPSIPGGDSGELLAEACHLGIPHPPGICPCCKQEGYLLFTP
GAVAWASNLLCCLLGAGASVLSCLSVEEWTWESPVAYNEGAAMASSLLFA
LGPVVWEYSTGTEVFALNNFLVAAAIYLTVRIFRRPSLRAARVGAVV
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mRNA from alignment at D-mesarthrocarpus_Contig9375:2582..3344+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9375.2.1 ID=mRNA_D-mesarthrocarpus_Contig9375.2.1|Name=mRNA_D-mesarthrocarpus_Contig9375.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=763bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9375:2582..3344+ (Discosporangium mesarthrocarpum MT17_79)
GTCCTAGGACTGTACGTCTGGACAGCCTTCCCATCAATCCCGGGTGGAGA TTCTGGTGAACTCCTTGCTGAGGCTTGCCATCTTGGTATCCCACACCCCC CAGGTATTTGTCCGTGCTGCAAACAAGAAGGGTATCTTTTGTTGTACAGG AAAAGATAGTCCTTAGCAGGAGTCGCCGTCCGCAGTTCCAGAGGCTCATC CGCCCTCCGTGATTCCGTTTATTGCACTAACATTGTTGGTGAATTCTCTT TTCAGGGGTAGGACACTCCATTTCCTGCTTGCCACATAAGATGACCAACC GCTGTACTGTCCTCTCGGAATATGCATCGATCTTTCGGATTCAGGATACC CCGTCTGGATTCTTCTCAACCACGTCCTCACCCGAGTGGTCAGGGTGATC GAAGGGTTGTCTTTGCAGTCTCCCCTCATCATGCCCCCACGTCCCCCGGA GGGCTGCCCCGTTAGCACCCCTGGCGCTGTAGCGTGGGCGTCTAACCTCC TGTGCTGCCTTCTGGGAGCAGGAGCAAGCGTATTGTCATGCCTGTCTGTG GAAGAGTGGACGTGGGAGTCACCGGTCGCCTACAACGAGGGTGCTGCGAT GGCTAGCTCCCTTCTCTTCGCCCTGGGACCTGTTGTTTGGGAATACAGCA CTGGAACAGAGGTGTTCGCTCTCAACAACTTCTTGGTGGCGGCTGCCATT TATCTTACTGTGCGGATTTTCAGGAGGCCAAGCCTGCGAGCAGCCAGGGT GGGGGCTGTGGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9375:2582..3344+

>mRNA_D-mesarthrocarpus_Contig9375.2.1 ID=mRNA_D-mesarthrocarpus_Contig9375.2.1|Name=mRNA_D-mesarthrocarpus_Contig9375.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=441bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9375:2582..3344+ (Discosporangium mesarthrocarpum MT17_79)
GTCCTAGGACTGTACGTCTGGACAGCCTTCCCATCAATCCCGGGTGGAGA
TTCTGGTGAACTCCTTGCTGAGGCTTGCCATCTTGGTATCCCACACCCCC
CAGGTATTTGTCCGTGCTGCAAACAAGAAGGGTATCTTTTGTTCACCCCT
GGCGCTGTAGCGTGGGCGTCTAACCTCCTGTGCTGCCTTCTGGGAGCAGG
AGCAAGCGTATTGTCATGCCTGTCTGTGGAAGAGTGGACGTGGGAGTCAC
CGGTCGCCTACAACGAGGGTGCTGCGATGGCTAGCTCCCTTCTCTTCGCC
CTGGGACCTGTTGTTTGGGAATACAGCACTGGAACAGAGGTGTTCGCTCT
CAACAACTTCTTGGTGGCGGCTGCCATTTATCTTACTGTGCGGATTTTCA
GGAGGCCAAGCCTGCGAGCAGCCAGGGTGGGGGCTGTGGTG
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