mRNA_D-mesarthrocarpus_Contig9371.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 213 bits (542), Expect = 5.740e-59 Identity = 165/492 (33.54%), Postives = 253/492 (51.42%), Query Frame = 1
Query: 1 GVGAGDLLAQMVEDTAGARALQRPVQAFVSSCHEPTVCRAGRLLTERAFALEHVGCASRKLEQTLAVGLGILGGEAAGVQEAVAAARRLVCRYAPQSRAASRLRECCILKGIVLEESLWRLGRKDCSWWSVYTVVEGLLRMREAVRLHEHVDGLAPAATEEHWTILSMLLPKLDPLVETRKMLEDHDSITSSLVIPFLHDLLGDLRTAVKDFEGKESRDSSSTSSDTLFNMRVCCQQMLGNFESWWGDG-NVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAMTTLEARRA-----AGEDTTTPEXXXRAVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDESAMVRSRLRQSAQLELSAFREAPGMPMYDHIAGDRGGGRVKLDPLQWWARRVKEFPILARVARRVLATPATQAQAEGAFLSGSGPDGAPLSPEQLPGAAMNLPHTDLLVYLRNTWPTVDKW 1458
G G+ LA +V L V A V+ C EP++ +AGRLL + H+GC++ ++E T + + G + G A+ AR LV RY S+ A+RL + C GI+ E L + + WWS + +V LL + +A++LHE +D + P ++ W +L ++ P L P ++ +K LE +T S+ I + +L L A+ D + + T+ + +R + ++ +F + WGDG N++ REG+ P GF R QV ATALDPR K LYGI + EH VW V A+ + A A + + AP XXXXXXXXXXXXX DE R +L +E+SAF+ APG+ ++D + G +V +PL W ++ E+P+LA +ARRVLA P++QAQ+E F + G ++P + + + + +LLVYLRN W VD+W
Sbjct: 82 GTTTGEDLAALVAGMVERHDLTGRVIACVTDC-EPSMIKAGRLLEVDGSTISHIGCSNHRMESTTS---SVFNGRSLG---ALGLARTLVGRYKKSSQMAARLVQLC---GILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEK---REQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTA----GLTVTPTR---SRLLDENVELLVYLRNVWGVVDEW 553
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 189 bits (480), Expect = 3.180e-50 Identity = 135/440 (30.68%), Postives = 218/440 (49.55%), Query Frame = 1
Query: 13 GDLLAQMVEDTAGARALQRPVQAFVSSCHEPTVCRAGRLLTERAFALEHVGCASRKLEQTLAVGLGILGGEAAGVQEAVAAARRLVCRYAPQSRAASRLRECCILKGIVLEESLWRLGRKDCSWWSVYTVVEGLLRMREAVRLHEHVDGLAPAATEEHWTILSMLLPKLDPLVETRKMLEDHDSITSSLVIPFLHDLLGDLRTAVKDFEGKESRDSSSTSSDTLFNMRVCCQQMLGNFESWWGDGN-VVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAMTTLEARRAAGEDTTTPEXXXRA--VAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDESAMVRSRLRQSAQLELSAFREAPGMPMYDHIAGDRGGGRVKLDPLQWWARRVKEFPILARVARRVLATPATQAQAE 1323
G+ LA+ + L V A V+ C EP++ +AGRLL LEH+GC++ ++E T + + G++ G A+A AR +V RY S+ + RL + GI+ L L + WWS + ++E LL + +A++LHE D +AP +E W +L ++ P L P ++ +K LE +T S+ +P + +L L A+ D + S+++ + + + + + +F + WGDG+ ++ REG+ P GF QV ATA+DPR K LYGI + EH +VW V +A+ + A + + ++T T A V G R +L LE+++F+ PG+ ++ + D G +V DPL WW R EFP LA +ARRVLA P++QA +E
Sbjct: 122 GEDLAREITSMIERHGLTGRVTACVTDC-EPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTS---SVFNGKSLG---ALAKARAVVGRYKRSSQMSGRL---AVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVD-IAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIW-YWGTD--GKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSE 547
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 155 bits (391), Expect = 9.120e-37 Identity = 175/518 (33.78%), Postives = 249/518 (48.07%), Query Frame = 1
Query: 10 AGDLLAQMVEDTAGARALQRPVQAFVSSCHEPTVCRAGRLLTERAFALEHVGCASRKLEQTLAVGLGILGGEAAGVQEAVAAARRLVCRYAPQSRAASRLRECCILKGIVLEESLWRLGRKDCSWWSVYTVVEGLLRMREAVRLHEHVDGLAPAATEEHWTILSMLLPKLDPLVETRKMLEDHDSITSSLVIPFLHDLLGDLRTAVKDFEGKESRDSSSTSSDTLFNMRVCCQQMLGNFESWWGDG-NVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAMTTLEARRAAGEDTTTPEXXXRAVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDESAMV---------------------------------------RSRLRQSAQLELSAFREAPGMPMYDHIAGDRGGGRVKLDPLQWWARRVKEFPILARVARRVLATPATQAQAEGAFLSGSGPDGAPLSPEQLPGAAMNLPHTDLLVYLRNTWP 1443
AG+ L + V+ L A + C E ++ +AGRLL E + H+GC +LE + G GV +A+A AR +V RY S+A+ RL + C IV E + + WWS Y + L+ +R + HE +D P E+ W +L ++ L P + +K LE +T LV P++ DL L AV+ + S + S ++ ++ +C Q + + WGD +V+ EG P GF + QVLATAL PR+K LYGI E EH VWD EA+ +A + XXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G S+ + R ++ E+ AF+ PG+ ++ + G V+ PL+WW + +E+P LA +ARRVL PA QAQ+E F S G ++ + A M+ + L+V+LRNT P
Sbjct: 50 AGEDLVEAVKAMIARNGLTGRTVAITTDC-ELSMVKAGRLLEENE-GVTHLGCFCHRLESITSQAFG-----GPGVSKALALARGVVTRYTISSQASDRLEQVC---DIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQA-HSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLA----VSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSA----GLVVTKTR---ARMDPENVGLMVFLRNTPP 545
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 132 bits (332), Expect = 5.800e-30 Identity = 103/315 (32.70%), Postives = 151/315 (47.94%), Query Frame = 1
Query: 13 GDLLAQMVEDTAGARALQRPVQAFVSSCHEPTVCRAGRLLTERAFALEHVGCASRKLEQTLAVGLGILGGEAAGVQEAVAAARRLVCRYAPQSRAASRLRECCILKGIVLEESLWRLGRKDCSWWSVYTVVEGLLRMREAVRLHEHVDGLAPAATEEHWTILSMLLPKLDPLVETRKMLEDHDSITSSLVIPFLHDLLGDLRTAVKDFEGKESRDSS---STSSDTLFNMRVCCQQMLGNFESWWGDGNVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAM-TTLEARRAAGEDT 945
G+ L + V+ L A + C EP++ +AGRLL E + H+GC +LE + G GV +A+A ARR+V RY S+A+ RL + ++ IV E + + WWS Y + LL +R + HE +D + P E+ W +L ++ P P + ++K E +T SLVIP++ DL +L AV+ + S D F + + +V PR GF + QVLATALDPR+K LYGI E EH VW+ V EA+ +EA+ A EDT
Sbjct: 95 GEDLVEAVKAMIARNGLTSRTVATTTDC-EPSMVKAGRLLEENE-GVTHLGCFCHRLESITSQAFG-----GPGVSKALALARRVVTRYNMSSQASDRLEQ---MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSV-----------IVEPR--------GFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAK--ATEDT 378
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 120 bits (301), Expect = 2.430e-26 Identity = 98/313 (31.31%), Postives = 147/313 (46.96%), Query Frame = 1
Query: 13 GDLLAQMVEDTAGARALQRPVQAFVSSCHEPTVCRAGRLLTERAFALEHVGCASRKLEQTLAVGLGILGGEAAGVQEAVAAARRLVCRYAPQSRAASRLRECCILKGIVLEESLWRLGRKDCSWWSVYTVVEGLLRMREAVRLHEHVDGLAPAATEEHWTILSMLLPKLDPLVETRKMLEDHDSITSSLVIPFLHDLLGDLRTAVKDFEGKESRDSSSTSSDTLFNMRVCCQQMLGNFESWWGDG-NVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAM-TTLEARRAAGEDT 945
G+ L + V+ L A + C EP + +AGRLL E + H+GC + E + G GV +A+A R +V RY S+A++RL + C IV E + + WWS +D + P E+ W +L ++ P L P + +K LE +T SLV ++ DL +L A++ + S + S ++ ++ C + + W DG +V+ EG P GF + QVLATALDPR+K LYGI E EH VW+ V EA+ +EA+ A EDT
Sbjct: 39 GEDLVEAVKAMIARNGLTGRTVATTTDC-EPFMVKAGRLLEENE-GVSHLGCFCHRFESITSQAFG-----GPGVSKALALPRGVVTRYTMSSQASNRLEQMC---DIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAY-SCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAK--ATEDT 322
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 118 bits (296), Expect = 2.560e-26 Identity = 115/257 (44.75%), Postives = 151/257 (58.75%), Query Frame = 1
Query: 721 NFESWWGDG-NVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAMT-TLEARRAAGEDTTTPEXXXRAVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------EGDESAMVRSRLRQSAQLELSAFREAPGMPMYDHIAGDRGGGRVKLDPLQWWARRVKEFPILARVARRVLATPATQAQAEGAFLSGSGPDGAPLSPEQLPGAAMNLPHT--DLLVYLRNTWPTVDKW 1458
+F + WGDG N++ +EGR P GF QVLATALDPRTK+LYG+ E+E VW +V EA+ +E R + + + XXXXXXXXXXXXXXXXXXXXXXXXXXXX EG +S+ VR + S ++EL+AF+ + G+ MY+ D+ G +V LDPL WW R +FP LA +ARRVLA PATQA++E F + NL T +LLV LR++W V++W
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRL-ITSSVRVELTAFKVSTGIKMYEE---DKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAG---------NIVTKNRNNLAPTTVELLVLLRHSWKIVEEW 293
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 6.560e-13 Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 1
Query: 529 VETRKMLEDHDSITSSLVIPFLHDLLGDLRTAVKDFEGKESRDSSSTSSDTLFNMRVCCQQMLGNFESWWGDG-NVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAMT-TLEARRAAGEDTTTPEXXXRAVA 978
V+ +++++D +T SLV+PF++DL L A+ D + DS + + + C + + ++ WGDG N++ +EG P GF VLATALDPRTK+ YG+ E+E VW +V EA+ +E R A T+ + A A
Sbjct: 188 VDNKRVIQD--VVTGSLVVPFIYDLRNSLEDAIDDLV-ELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAA 336
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 2.750e-8 Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 1
Query: 700 CCQQMLGNFESWWGDG-NVVTPREGRGDAPVGFSRGQVLATALDPRTKVLYGIPEEEHPAVWDMVVMEAMTTL--EARRAAGEDTTT 951
C + + +F + WGDG N++ +EG P GF QVLATALDPRTK+L+G+ E+E VW +V E + E R A T+
Sbjct: 165 CIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAENSQRTS 251 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9371.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9371.4.1 >prot_D-mesarthrocarpus_Contig9371.4.1 ID=prot_D-mesarthrocarpus_Contig9371.4.1|Name=mRNA_D-mesarthrocarpus_Contig9371.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=476bp MVEDTAGARALQRPVQAFVSSCHEPTVCRAGRLLTERAFALEHVGCASRKback to top mRNA from alignment at D-mesarthrocarpus_Contig9371:2903..4897- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9371.4.1 ID=mRNA_D-mesarthrocarpus_Contig9371.4.1|Name=mRNA_D-mesarthrocarpus_Contig9371.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1995bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9371:2903..4897- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9371:2903..4897- >mRNA_D-mesarthrocarpus_Contig9371.4.1 ID=mRNA_D-mesarthrocarpus_Contig9371.4.1|Name=mRNA_D-mesarthrocarpus_Contig9371.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1428bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9371:2903..4897- (Discosporangium mesarthrocarpum MT17_79)back to top |