mRNA_D-mesarthrocarpus_Contig937.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.430e-67 Identity = 110/144 (76.39%), Postives = 125/144 (86.81%), Query Frame = 1
Query: 1 MAVSPALAEETANADEVPELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKPSRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAVSGL 432
MAVS A AEE +N ++VP+LK V + FE +DIRVGRIV AE +PDPDHGNKPSRKYLSLVVDLG+EKR +VSA+R IVDVEDAIGKAVL+ AN++EETILG PS G++LS SNFSKEPMPRTLRTVLL GGGVPPGSAVSGL
Sbjct: 3 MAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA) HSP 1 Score: 191 bits (486), Expect = 4.420e-60 Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 1
Query: 1 MAVSPALAEETANADEVPELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKPSRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAVSGL 432
+AVS AL EE ++ +VP L+ V V ++E +DIRVGRIVKAE VPDPDHGNKPSRKYLSLVV LG+E R I+S +RP+ DVE+AIGK+VLVVAN +EE ILGRPS GR+L A+N+SK PMPRTLRTVLL GG VPPGS V+GL
Sbjct: 16 VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP) HSP 1 Score: 144 bits (363), Expect = 8.630e-41 Identity = 72/134 (53.73%), Postives = 103/134 (76.87%), Query Frame = 1
Query: 25 EETANADEVPELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKPSRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAVS 426
E+ + ++P +K V +++DIRVGRI +A+ +PDP+H KPSRKYL L+V++G+EKR IV+A R I DVE++IG++VLV N++++T+LG S GR+LSASN ++ P+PRTLRTVL GGG+PPGS VS
Sbjct: 71 EDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A2R6X722_MARPO (tRNA-binding domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X722_MARPO) HSP 1 Score: 102 bits (255), Expect = 1.970e-24 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 52 PELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKP-----SRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAVSG 429
P +K V V FE++DIRVG I A+ V DP+ K SRK+L L VD+G E+R +VS + ++DVEDA+GK VL VAN+ +LG S G +L+ N+ PMPR+ + +L G +PPGS V G
Sbjct: 82 PAVKPEVDVSTFESLDIRVGLITDAKAVADPEMSAKRGVPTMSRKHLQLTVDIGCEERIVVSECKYVMDVEDAVGKKVLFVANVPPCEVLGITSHGMLLTGFNYDPTPMPRSFKVILPGLGRLPPGSEVKG 212
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A176WMH6_MARPO (tRNA-binding domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WMH6_MARPO) HSP 1 Score: 100 bits (250), Expect = 1.850e-22 Identity = 58/129 (44.96%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 52 PELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKP-----SRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAV 423
P +K V V FE++DIRVG I A+ V DP+ K SRK+L L VD+G E+R +VS + ++DVEDA+GK VL VAN+ +LG S G +L+ N+ PMPR+ + +L G +PPGS V
Sbjct: 82 PAVKPEVDVSTFESLDIRVGLITDAKAVADPEMSAKRGVPTMSRKHLQLTVDIGCEERIVVSECKYVMDVEDAVGKKVLFVANVPPCEVLGITSHGMLLTGFNYDPTPMPRSFKVILPGLGRLPPGSEV 210
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA) HSP 1 Score: 97.8 bits (242), Expect = 1.940e-22 Identity = 59/139 (42.45%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 28 ETANADEVPELKGSVPVDAFETMDIRVGRIVKAEQVPDPD---HGNKP--SRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAVSG 429
ET + P +K V FE++D+RVG I A+ V D + KP SRK+L L VD+G E+R IVS + ++DVEDA+GK VL+VAN+ + G S G +L+ N+ PMPR+ + +L G +PPGS V G
Sbjct: 81 ETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A1Y1HKH6_KLENI (tRNA-binding domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKH6_KLENI) HSP 1 Score: 95.1 bits (235), Expect = 7.560e-22 Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 52 PELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKP-----SRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGSAV 423
P++K + F +DIRVG + A+ VPD + K SRK+L L VD+GSE R +VS + ++DVEDA+GK VL VANL + G S G +L N+ PMPR+ + +L G +PPGS +
Sbjct: 43 PKIKEQIGFSDFAKVDIRVGLVTDAKAVPDKEMTEKRGKPTMSRKFLQLKVDIGSETRTVVSQCKYVMDVEDAVGKKVLFVANLPPTEVEGITSHGLVLQGLNYDPTPMPRSFKVILPGLGKLPPGSPI 171
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA) HSP 1 Score: 94.7 bits (234), Expect = 2.800e-21 Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 28 ETANADEVPELKGSVPVDAFETMDIRVGRIVKAEQVPDPD---HGNKP--SRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSASNFSKEPMPRTLRTVLLAGGGVPPGS 417
ET + P +K V FE++D+RVG I A+ V D + KP SRK+L L VD+G E+R IVS + ++DVEDA+GK VL+VAN+ + G S G +L+ N+ PMPR+ + +L G +PPGS
Sbjct: 53 ETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A0V8RUX0_PYROC (Methionine--tRNA ligase n=1 Tax=Pyrodictium occultum TaxID=2309 RepID=A0A0V8RUX0_PYROC) HSP 1 Score: 71.6 bits (174), Expect = 2.030e-13 Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 49 VPELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKPSRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSA 339
+P +G + +D F +D+RVG++V+AE++P + L L+VDLGSEKR IVS I ED +GK V+VV NL + I G S G IL+A
Sbjct: 1 MPGEEGYITIDEFSRVDLRVGKVVEAERIP--------GTRLLKLIVDLGSEKRQIVSGIAEYYKPEDLLGKKVVVVVNLKPKKIRGYLSEGMILAA 89
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Match: A0A0P0N3E0_9CREN (Methionine--tRNA ligase subunit beta n=1 Tax=Pyrodictium delaneyi TaxID=1273541 RepID=A0A0P0N3E0_9CREN) HSP 1 Score: 71.2 bits (173), Expect = 2.860e-13 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 61 KGSVPVDAFETMDIRVGRIVKAEQVPDPDHGNKPSRKYLSLVVDLGSEKRGIVSAIRPIVDVEDAIGKAVLVVANLDEETILGRPSCGRILSA 339
K + +D F +D+RVG++V+AE++P + L LVVDLGSEKR I+S I ED +GK V+VVANL + I G S G IL+A
Sbjct: 5 KAYITIDEFARIDLRVGKVVEAERIP--------GTRLLKLVVDLGSEKRQIISGIAEYYSPEDLLGKKVVVVANLKPKKIRGYLSEGMILAA 89 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig937.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig937.3.1 >prot_D-mesarthrocarpus_Contig937.3.1 ID=prot_D-mesarthrocarpus_Contig937.3.1|Name=mRNA_D-mesarthrocarpus_Contig937.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=145bp MAVSPALAEETANADEVPELKGSVPVDAFETMDIRVGRIVKAEQVPDPDHback to top mRNA from alignment at D-mesarthrocarpus_Contig937:11636..13257- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig937.3.1 ID=mRNA_D-mesarthrocarpus_Contig937.3.1|Name=mRNA_D-mesarthrocarpus_Contig937.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1622bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig937:11636..13257- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig937:11636..13257- >mRNA_D-mesarthrocarpus_Contig937.3.1 ID=mRNA_D-mesarthrocarpus_Contig937.3.1|Name=mRNA_D-mesarthrocarpus_Contig937.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=435bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig937:11636..13257- (Discosporangium mesarthrocarpum MT17_79)back to top |