mRNA_D-mesarthrocarpus_Contig9369.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9369.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9369.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A8C6VY88_NOTFU (BED-type domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6VY88_NOTFU)

HSP 1 Score: 65.9 bits (159), Expect = 6.660e-11
Identity = 28/49 (57.14%), Postives = 41/49 (83.67%), Query Frame = 1
Query:   64 DDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            D+ L WW++NQ  FP+LA+L+ ++LA+PATS  SER+FS AGNT+T++R
Sbjct:  508 DNPLQWWSRNQDRFPHLAKLSKSYLAVPATSTPSERIFSLAGNTITRQR 556          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: UPI0019650EE2 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019650EE2)

HSP 1 Score: 65.5 bits (158), Expect = 7.660e-11
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 1
Query:    4 VADEITRFRATTGLQLEASGDDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            + +E+  + A +G+ ++    D L WW  N+  +P+LA +A  HLA+P TS   ERVFSTAG+TVT KR
Sbjct:  255 IKEEVVSYEAASGIPVDG---DPLTWWKSNECKYPHLATMARHHLAVPGTSVPMERVFSTAGDTVTAKR 320          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE)

HSP 1 Score: 62.0 bits (149), Expect = 1.970e-10
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 1
Query:   64 DDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            DD L+WW  N+  FP LA+LA + L IPATS  SER+FS AGN V+KKR
Sbjct:   77 DDPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKR 125          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A3B4VA39_SERDU (BED-type domain-containing protein n=1 Tax=Seriola dumerili TaxID=41447 RepID=A0A3B4VA39_SERDU)

HSP 1 Score: 64.3 bits (155), Expect = 2.330e-10
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1
Query:   73 LVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            L WW +N+  FP LA+LA +HLAIPATS  SERVFS AGNT+T++R
Sbjct:  556 LEWWARNEKQFPRLAKLARSHLAIPATSTPSERVFSLAGNTITRQR 601          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A0A1WMC4_ZEUCU (Putative AC9 transposase n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WMC4_ZEUCU)

HSP 1 Score: 62.0 bits (149), Expect = 2.480e-10
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1
Query:    4 VADEITRFRATTGLQLEASGD-DALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKRN 213
            V+DEI R+ A     +E S + D + WW  N   +P L++LA   LAIPA+SA SERVFS AGN +T+KRN
Sbjct:   71 VSDEIRRYSAEN---VEFSENFDVMQWWLNNNKRYPRLSKLAEKVLAIPASSAASERVFSLAGNIITEKRN 138          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A1X7T0Z4_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T0Z4_AMPQE)

HSP 1 Score: 60.8 bits (146), Expect = 2.690e-10
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 1
Query:   61 GDDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKRN 213
            G    +WW  N   FP L+++A+  L IPATS  SERVFSTAGNTVT+KRN
Sbjct:   57 GTSPSMWWKDNSKRFPLLSQVAMDFLHIPATSTPSERVFSTAGNTVTQKRN 107          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A1A8S6F3_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8S6F3_9TELE)

HSP 1 Score: 60.1 bits (144), Expect = 2.990e-10
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   13 EITRFRATTGLQLEASGDDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            ++++  A  G Q     DD L+WW  N+  F  LA+LA + L IPATS  SER+FS AGN V+KKR
Sbjct:    1 QLSQVLAYFGEQSLPKKDDPLIWWKANEQRFTTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKR 66          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: X1WTR1_ACYPI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WTR1_ACYPI)

HSP 1 Score: 62.4 bits (150), Expect = 3.750e-10
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 1
Query:    4 VADEITRFRATTGLQLEASGDDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            ++D+   + A T L+ +    D   WW   +H +P +A+LA+ +L IPATS +SER FSTAGN VT KR
Sbjct:  119 ISDQFQGYLAETQLRFDF---DPFEWWKTREHKYPVIAKLALKYLTIPATSVSSERCFSTAGNIVTSKR 184          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: UPI00146A20A2 (zinc finger BED domain-containing protein 1-like n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146A20A2)

HSP 1 Score: 62.4 bits (150), Expect = 7.400e-10
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1
Query:   64 DDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            D+ L WW +N H FP + +L+ ++LAIPATS  SERVFS AGNTVT++R
Sbjct:  195 DNPLEWWAENAHRFPRVPKLSRSYLAIPATSTPSERVFSLAGNTVTRQR 243          
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Match: A0A7M7LVY2_STRPU (BED-type domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7LVY2_STRPU)

HSP 1 Score: 62.8 bits (151), Expect = 8.110e-10
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1
Query:   10 DEITRFRATTGLQLEASGDDALVWWTKNQHGFPYLARLAVTHLAIPATSATSERVFSTAGNTVTKKR 210
            D +        L +  S  DA+ WW  N+  FP L  +A   L IPATS  SERVFSTAGN VTKKR
Sbjct:  504 DSVEEIHTFFDLPVVPSTADAVAWWKANEASFPLLGNVAKRFLTIPATSVPSERVFSTAGNIVTKKR 570          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8C6VY88_NOTFU6.660e-1157.14BED-type domain-containing protein n=1 Tax=Nothobr... [more]
UPI0019650EE27.660e-1144.93E3 SUMO-protein ligase ZBED1-like n=1 Tax=Polypter... [more]
A0A1A8M216_9TELE1.970e-1061.22Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]
A0A3B4VA39_SERDU2.330e-1065.22BED-type domain-containing protein n=1 Tax=Seriola... [more]
A0A0A1WMC4_ZEUCU2.480e-1050.70Putative AC9 transposase n=1 Tax=Zeugodacus cucurb... [more]
A0A1X7T0Z4_AMPQE2.690e-1058.82Dimer_Tnp_hAT domain-containing protein n=1 Tax=Am... [more]
A0A1A8S6F3_9TELE2.990e-1048.48Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
X1WTR1_ACYPI3.750e-1044.93Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ac... [more]
UPI00146A20A27.400e-1059.18zinc finger BED domain-containing protein 1-like n... [more]
A0A7M7LVY2_STRPU8.110e-1049.25BED-type domain-containing protein n=1 Tax=Strongy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9369contigD-mesarthrocarpus_Contig9369:1924..2136 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7029.ACYPI27651-PA
PFAMsDUF659,Dimer_Tnp_hAT,zf-BED
Model size213
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.92e-11
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota,39SKR@33154|Opisthokonta,3BBS9@33208|Metazoa,3CUF3@33213|Bilateria
DescriptionZinc finger BED domain-containing protein
Cds size213
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791090.5079772-CDS-D-mesarthrocarpus_Contig9369:1923..21361680791090.5079772-CDS-D-mesarthrocarpus_Contig9369:1923..2136Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9369 1924..2136 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9369.1.1prot_D-mesarthrocarpus_Contig9369.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9369 1924..2136 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9369.1.1

>prot_D-mesarthrocarpus_Contig9369.1.1 ID=prot_D-mesarthrocarpus_Contig9369.1.1|Name=mRNA_D-mesarthrocarpus_Contig9369.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=71bp
MVADEITRFRATTGLQLEASGDDALVWWTKNQHGFPYLARLAVTHLAIPA
TSATSERVFSTAGNTVTKKRN
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mRNA from alignment at D-mesarthrocarpus_Contig9369:1924..2136-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9369.1.1 ID=mRNA_D-mesarthrocarpus_Contig9369.1.1|Name=mRNA_D-mesarthrocarpus_Contig9369.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=213bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9369:1924..2136- (Discosporangium mesarthrocarpum MT17_79)
ATGGTGGCAGATGAGATCACGAGATTTCGGGCTACCACAGGCCTGCAGCT GGAAGCCTCGGGCGACGACGCCCTTGTGTGGTGGACCAAGAACCAGCATG GCTTCCCATACCTGGCACGACTTGCTGTGACGCACCTTGCCATCCCGGCA ACATCTGCTACATCTGAGCGGGTGTTTTCGACTGCAGGCAACACTGTTAC GAAGAAACGTAAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9369:1924..2136-

>mRNA_D-mesarthrocarpus_Contig9369.1.1 ID=mRNA_D-mesarthrocarpus_Contig9369.1.1|Name=mRNA_D-mesarthrocarpus_Contig9369.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=213bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9369:1924..2136- (Discosporangium mesarthrocarpum MT17_79)
ATGGTGGCAGATGAGATCACGAGATTTCGGGCTACCACAGGCCTGCAGCT
GGAAGCCTCGGGCGACGACGCCCTTGTGTGGTGGACCAAGAACCAGCATG
GCTTCCCATACCTGGCACGACTTGCTGTGACGCACCTTGCCATCCCGGCA
ACATCTGCTACATCTGAGCGGGTGTTTTCGACTGCAGGCAACACTGTTAC
GAAGAAACGTAAC
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