mRNA_D-mesarthrocarpus_Contig9360.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9360.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9360.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: D8LFD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFD5_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 1.930e-30
Identity = 87/221 (39.37%), Postives = 115/221 (52.04%), Query Frame = 1
Query:   10 KFQWSETASLAKRYDLCATGPVLKKAL-DIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTNTAPQTPTXXXXXXXXXXXXXXXXXXXXXXXLGSETAGGXXXXXXXRQQRGPGLQSMSDKDVRAAERLQFQGDLEEIYEGLKADGVSPVPAVWQAVREAKKMA-----KERKKKRRTFGGSAVAMY 654
            +F W     LA  +DLCATGP    AL +  P     + HFRVLARMTP LKEELA  L  AG+TVLMCGDGSNDVGAL++S VGLALLSGFG+ NT     +                       + S   GG          R   L+  +  ++   ER + Q D+ E ++ L+++GV+P  A+W+A   A K       +++K     F  SAVAM+
Sbjct: 1163 EFSWGGMEGLAATHDLCATGPAFALALGEEDPALGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANT---DESKSESPSVTSDGGATTKNKGKDETVKSGGGGGD---------RAGALEGKNAAEILKEEREKVQADITEEFDRLRSEGVNPAKAMWKASSAANKKRSMRDIQQKKASHGDFAASAVAMF 1371          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A6H5KDZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDZ3_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 4.050e-30
Identity = 86/220 (39.09%), Postives = 111/220 (50.45%), Query Frame = 1
Query:   10 KFQWSETASLAKRYDLCATGPVLKKAL-DIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTNTAPQTPTXXXXXXXXXXXXXXXXXXXXXXXLGSETAGGXXXXXXXRQQRGPGLQSMSDKDVRAAERLQFQGDLEEIYEGLKADGVSPVPAVWQAVREAKKMAKERKKKRRT-----FGGSAVAM 651
            +F W     LA  +DLCATGP    A+ +  P     + HFRVLARMTP LKEELA  L  AG+TVLMCGDGSNDVGAL++S VGLALLSGFG+ NT                              G   A            R   L+  +  ++   ER + Q D+ E ++ L+++GV+P  A+W+A   A K    R  +R+      F  SAVAM
Sbjct:  236 EFSWGGMEGLAATHDLCATGPAFALAIGEEDPAMGSAIHHFRVLARMTPGLKEELATLLMEAGKTVLMCGDGSNDVGALRRSHVGLALLSGFGDANTDESKSEAPLLTSDSDGGATTDKSKDETVKSGGGGA------------RAGALEGKNAAEILKEEREKVQADITEEFDRLRSEGVNPAKAMWKASSAANKKRSMRDIQRKKASHGDFAASAVAM 443          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: W7TW81_9STRA (p-atpase family transporter: cation n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW81_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.230e-23
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1
Query:   37 LAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            LA+ YDLC  G  L  A  +HP  RR LEHF V ARMTPD KE +  +LKA GR  +MCGDG+NDVGALK++DVG+ALLSGFG+ N
Sbjct: 1050 LARDYDLCTAGMPLAVASKVHPALRRHLEHFVVFARMTPDEKEAVITSLKAEGRVCMMCGDGANDVGALKQADVGVALLSGFGDLN 1135          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A8J9SHG6_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SHG6_PHATR)

HSP 1 Score: 96.7 bits (239), Expect = 9.900e-22
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 1
Query:   10 KFQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            +F   E  SL+K YDL  TG  L  AL+   +  + LE+ +V ARMTPD KE +   L +     LMCGDG+NDVGALK++DVG+ALLSGFGN N
Sbjct:   32 EFIADEIPSLSKGYDLATTGACLAAALEQDEEMSKVLEYIKVFARMTPDAKETVIECLHSVNALCLMCGDGANDVGALKQADVGVALLSGFGNLN 126          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: B5YNZ0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNZ0_THAPS)

HSP 1 Score: 101 bits (251), Expect = 7.170e-21
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 1
Query:   22 SETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            +E   LAK YDL  TG  L+ A +    ++  LEHF+V ARMTPD KE +   L + G+  LMCGDG+NDVGALK++DVG+ALLSGFG+ N
Sbjct:  702 NEVPKLAKSYDLAVTGNNLETAYEYDVATKTILEHFKVFARMTPDAKETVIECLHSVGKLCLMCGDGANDVGALKQADVGVALLSGFGDVN 792          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A7S1ZGT6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZGT6_TRICV)

HSP 1 Score: 100 bits (250), Expect = 9.540e-21
Identity = 49/96 (51.04%), Postives = 65/96 (67.71%), Query Frame = 1
Query:    7 RKFQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            ++F  +    LAK YDL  TG  L  A +   +++R L HF++ ARMTPD KE +   L + G   LMCGDG+NDVGALK++DVG+ALLSGFG+ N
Sbjct:  464 QEFTAAGVPDLAKEYDLATTGKNLSAAFEYDDETKRVLAHFKIFARMTPDAKETVIECLHSIGNLCLMCGDGANDVGALKQADVGVALLSGFGDVN 559          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A7S3UVI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI2_HETAK)

HSP 1 Score: 100 bits (249), Expect = 1.120e-20
Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = 1
Query:    1 FPRKFQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTNTAPQ 306
            F   F+  +   L +R +LC  G  LK  L   P+ R+ L + +V ARM+P+LKE+L   LK AG+TVLMCGDG+ND+GALK++DVGLALL GFG+ NT  Q
Sbjct:  136 FFEPFEDGDFEILQRRNNLCIMGSALKVLLK-DPEDRKHLHYVKVFARMSPELKEKLCFYLKEAGQTVLMCGDGANDIGALKQADVGLALLGGFGDENTGNQ 236          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A7S1ZNT5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZNT5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.150e-20
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1
Query:   13 FQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            F  SE   +AK YDL  TG  L    +   +S++ L HF++ ARMTPD KE +   L + G   LMCGDG+NDVGALK++DVG+ALLSGFG+ N
Sbjct:   49 FVASEVPEIAKSYDLATTGKNLAAVFEFDQESKKVLGHFKIFARMTPDAKETVIECLHSVGSLCLMCGDGANDVGALKQADVGVALLSGFGDVN 142          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A7S2ELI2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELI2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.380e-20
Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1
Query:   13 FQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            F  SE   +AK YDL  TG  L    +   +S++ L HF++ ARMTPD KE +   L + G   LMCGDG+NDVGALK++DVG+ALLSGFG+ N
Sbjct: 1048 FVASEVPEIAKSYDLATTGKNLAAVFEFDQESKKVLGHFKIFARMTPDAKETVIECLHSVGSLCLMCGDGANDVGALKQADVGVALLSGFGDVN 1141          
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Match: A0A418C0U4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C0U4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.030e-20
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 1
Query:   13 FQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMTPDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTN 294
            ++    A+LAK YDLC  G  L +A D++    + LE  RV ARMTP+LKE +  +LK+ G   LMCGDG NDVGALK++ VG+ALLSGFG+ N
Sbjct:   48 YEGQSVATLAKTYDLCMDGAALVRADDVNGGVWKHLELIRVFARMTPELKERVLTSLKSCGHFTLMCGDGGNDVGALKQAHVGVALLSGFGSAN 141          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9360.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD5_ECTSI1.930e-3039.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDZ3_9PHAE4.050e-3039.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TW81_9STRA2.230e-2362.79p-atpase family transporter: cation n=2 Tax=Monodo... [more]
A0A8J9SHG6_PHATR9.900e-2252.63Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
B5YNZ0_THAPS7.170e-2154.95Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S1ZGT6_TRICV9.540e-2151.04Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3UVI2_HETAK1.120e-2051.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1ZNT5_9STRA1.150e-2052.13Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2ELI2_9STRA1.380e-2052.13Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A418C0U4_9STRA2.030e-2053.19Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9360contigD-mesarthrocarpus_Contig9360:1298..4066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LFD5
PFAMsCation_ATPase,E1-E2_ATPase,Hydrolase
Model size705
Max annot lvl2759|Eukaryota
KEGG koko:K14950
KEGG TC3.A.3.10
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001709,GO:0003674,GO:0003824,GO:0005215,GO:0005388,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0007154,GO:0007275,GO:0008150,GO:0008324,GO:0009267,GO:0009555,GO:0009605,GO:0009846,GO:0009856,GO:0009888,GO:0009987,GO:0009991,GO:0010073,GO:0010152,GO:0012505,GO:0015075,GO:0015085,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0016020,GO:0016021,GO:0016036,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0021700,GO:0022414,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030154,GO:0031224,GO:0031226,GO:0031667,GO:0031668,GO:0031669,GO:0032501,GO:0032502,GO:0033554,GO:0034220,GO:0042592,GO:0042594,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044706,GO:0045165,GO:0046873,GO:0048229,GO:0048507,GO:0048856,GO:0048863,GO:0048865,GO:0048867,GO:0048869,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071496,GO:0071944,GO:0072503,GO:0072507,GO:0072511,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099131,GO:0099132
Exons4
Evalue3.17e-31
EggNOG OGsCOG0474@1|root,KOG0209@2759|Eukaryota
Descriptioncalcium-transporting ATPase activity
Cds size702
COG categoryP
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791090.0617294-CDS-D-mesarthrocarpus_Contig9360:1298..14961680791090.0617294-CDS-D-mesarthrocarpus_Contig9360:1298..1496Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9360 1299..1496 -
1680791090.0757709-CDS-D-mesarthrocarpus_Contig9360:2293..25881680791090.0757709-CDS-D-mesarthrocarpus_Contig9360:2293..2588Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9360 2294..2588 -
1680791090.085456-CDS-D-mesarthrocarpus_Contig9360:3141..32371680791090.085456-CDS-D-mesarthrocarpus_Contig9360:3141..3237Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9360 3142..3237 -
1680791090.0947628-CDS-D-mesarthrocarpus_Contig9360:3953..40661680791090.0947628-CDS-D-mesarthrocarpus_Contig9360:3953..4066Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9360 3954..4066 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9360.2.1prot_D-mesarthrocarpus_Contig9360.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9360 1299..4066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9360.2.1

>prot_D-mesarthrocarpus_Contig9360.2.1 ID=prot_D-mesarthrocarpus_Contig9360.2.1|Name=mRNA_D-mesarthrocarpus_Contig9360.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=234bp
FPRKFQWSETASLAKRYDLCATGPVLKKALDIHPDSRRFLEHFRVLARMT
PDLKEELAGALKAAGRTVLMCGDGSNDVGALKKSDVGLALLSGFGNTNTA
PQTPTAGSGDDEGDGGRGDGPGLGLGSGLGSETAGGGEEGAGGRQQRGPG
LQSMSDKDVRAAERLQFQGDLEEIYEGLKADGVSPVPAVWQAVREAKKMA
KERKKKRRTFGGSAVAMYGAGARAGGAGRGDGAG
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9360:1298..4066-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9360.2.1 ID=mRNA_D-mesarthrocarpus_Contig9360.2.1|Name=mRNA_D-mesarthrocarpus_Contig9360.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2769bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9360:1298..4066- (Discosporangium mesarthrocarpum MT17_79)
TTTCCGAGAAAGTTCCAGTGGTCAGAGACGGCATCCCTGGCAAAGCGCTA CGACCTATGCGCCACAGGCCCTGTGCTGAAGAAGGCCCTGGACATTCATC CTGATAGCAGGAGGTGCTGTTTTGTGCATGTCTGCGGGGGAGGGGGGGGG GGGAGGAAGGGGGGGAGATTAGGTACAACAGCTGTTTCCTACTATACCCC AGTACTTATAGGCATGTCAAAATGGAGCTGGTGTGACGGAGGAGGTTAGA GGGACATCATGGTTAAAAAAAGGAAGGCGTTGGACAGGGTTTTGATAAGA TGGCGGAGGAGCGGGGGGGGATACAGACCAGTCTGACTACAGAAAGGGTT AGGGAATGACACCTCGGGTATAGATTTTCTCCCTCTCCTTGCGTCTTAGA TGCCCCTGAAAAACACACCATGAGTTGCAGTCAATCACTGAACATCTTGA ACCCCAACACCCCAATGATGTTGTCGACTGTTTTTTTTTTCTCGGCAAAA CTGGCTCTTCGCTGCGCTTCCCTTTCGAAACCCCCCAACCCCTCTACTTG TCACACAGCCCTAACCCCAACCCTAACCCTAACCCTACCTATTTCTCAAG AATATCGTGTACTTGATGTATTGCATGGTTCACTGTAGTACATTTCATAC TTCACTATAGTACATCTCAAGAATGCTTTGTTCCCGCTCCAAGGTATTTC CACTAATGACAAGTAATAGTGGTGATATTTGTCATAACAATACCATTAAT AAGTAGTGATGGTGATTGGTAATAGCAACATTATCGAATACTAATAACAA CAATAACGATACTGCTCTCATAATCAAAGGTTCCTGGAGCACTTCCGGGT GCTGGCTCGCATGACACCTGACCTCAAGGAGGAGCTGGCGGGGGCACTCA AGGCTGCTGGGCGCACGGTGCTCATGTAGGTCACGAGATGAGTGTCTCCT CTCCCATGCCTGTCCTCTTCTTTTTCTTCCTTAGGGCTGAAGTATGAAGT AGGGTTAGGGTTAGGGTTAGGGTTAGTATGAAGTATCGAGTATTTACATC CTCAACCTCACGGCTAGGAAGGGTGTTGTCTATTTTCCCTCCCCCCCACG CCCTACTTTCTGTCTCTTTTACCCCTTGCCTGTGGCCTCCTGCCCTAACG TACTCCTGACCCTTACCCTATAACCCAAATATCCAAACGCCCAACAATTC CGAGGCTGTAACCCTGTAACTGTAACCCTGTAACTGTAAGCCTAGCCCCA TAAACCCTAACCCTGCGAAACCTAACCCCACAAAAGATCTGACCCTACAA CAAGACCTAACTCTAACCCCCTAGGTGTGGCAACAGCTCCGAGGTCGTGA CCCTGTAACCGTAACCCCATAGAGCCTAACCCTAACCCTAACCCTATCCC TAACCCTAACCCCAACCCTAACCTCATAGAGCCTAATTCTAACCCTAACC CTAACCCTAACCCTAACCCTAACCCTAGGTGTGGCGATGGGTCCAACGAC GTGGGGGCCCTCAAAAAGTCTGATGTTGGCCTGGCACTGCTCTCAGGCTT CGGGAACACCAACACCGCCCCACAGACCCCCACTGCTGGCAGCGGTGATG ACGAGGGTGATGGAGGCAGGGGGGATGGCCCAGGGTTAGGGTTGGGGTCG GGTCTGGGGTCTGAAACAGCTGGTGGGGGCGAGGAAGGGGCGGGGGGGAG GCAGCAGAGGGGACCGGGCCTGCAATCGATGAGCGACAAGGATGTGAGGG CTGCGGAGCGGCTGCAGTTTCAGGTCAGGGTTAGGGTTGAGAGATGGATT TAGTTGGGGTCCGGTTAGAGATAGAGTTATGGTCAGGGTCAGGGTTATAG GGATAGGGTCAGGGTTACAGGGATAGGCTTGCGGTCAGGTGGCGGGATCA GGTTGGGAGCTGGGCTTTTTGGTTGGTTTGTTTTGTTATTATTGAGGGCT GTGTCAGGTTTCAGGTTACCTGCTGCAGGTTGGGTTGAGTAGGGGAAAGG GGCACAGAGAGGGGTGTGACAGGCTAGTGTTACTCCCTTTTTGAGAAGAC AGGATGACTAGGATGATGGTATTGTAGTAAGATTGGTAAGGGTTAGGGTT AGGGTTAGGGTCGCTCTCGTAAACTTGGTAGTAAAGAAAGACTAGGGTAG ATGAGAAATAGAGCTGCTGCATGGTGCTAGTACCGCATCCTGATCGAGCA TATGGTTGTGTGAAGCGTTAGTTCAGGGCACACACTTCCCTACGTTTCCA TCACCCCTAACCCTAAGCCTAAGCCTCTTATAAGCTCCCTTGACCAGCCC CTGCGGTGCATCCCTGTTTTAGACTCCAAACACCCAAACACCCAAACACT CCCTCTCTGATCCTACTGGGTTACTGCGGGCCTTGAGTTGATTTCACCTC CCCCAAGTTCGCCCAGCTTGCATCCTCTCTTATTGCCTGCCCTAGCTCTA AAGCTAAAGCTAGCCCTAACGCTGTGTACGTATGTATGCCTTTCCAATCT ACCTTTTTTCTTTCATTTTTCTCGGATTTAAAAAAAAAATTAAATGCTTC GGAAAAAAAAAAAAAAAAAGGGAGATCTGGAGGAGATCTACGAGGGGCTC AAGGCCGATGGAGTTTCCCCAGTACCAGCGGTGTGGCAGGCTGTAAGGGA GGCCAAGAAGATGGCCAAGGAGAGGAAGAAGAAGAGGCGCACCTTTGGGG GCTCCGCCGTCGCCATGTACGGGGCTGGGGCCAGGGCTGGGGGTGCAGGG CGGGGGGACGGCGCTGGCA
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9360:1298..4066-

>mRNA_D-mesarthrocarpus_Contig9360.2.1 ID=mRNA_D-mesarthrocarpus_Contig9360.2.1|Name=mRNA_D-mesarthrocarpus_Contig9360.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=702bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9360:1298..4066- (Discosporangium mesarthrocarpum MT17_79)
TTTCCGAGAAAGTTCCAGTGGTCAGAGACGGCATCCCTGGCAAAGCGCTA
CGACCTATGCGCCACAGGCCCTGTGCTGAAGAAGGCCCTGGACATTCATC
CTGATAGCAGGAGGTTCCTGGAGCACTTCCGGGTGCTGGCTCGCATGACA
CCTGACCTCAAGGAGGAGCTGGCGGGGGCACTCAAGGCTGCTGGGCGCAC
GGTGCTCATGTGTGGCGATGGGTCCAACGACGTGGGGGCCCTCAAAAAGT
CTGATGTTGGCCTGGCACTGCTCTCAGGCTTCGGGAACACCAACACCGCC
CCACAGACCCCCACTGCTGGCAGCGGTGATGACGAGGGTGATGGAGGCAG
GGGGGATGGCCCAGGGTTAGGGTTGGGGTCGGGTCTGGGGTCTGAAACAG
CTGGTGGGGGCGAGGAAGGGGCGGGGGGGAGGCAGCAGAGGGGACCGGGC
CTGCAATCGATGAGCGACAAGGATGTGAGGGCTGCGGAGCGGCTGCAGTT
TCAGGGAGATCTGGAGGAGATCTACGAGGGGCTCAAGGCCGATGGAGTTT
CCCCAGTACCAGCGGTGTGGCAGGCTGTAAGGGAGGCCAAGAAGATGGCC
AAGGAGAGGAAGAAGAAGAGGCGCACCTTTGGGGGCTCCGCCGTCGCCAT
GTACGGGGCTGGGGCCAGGGCTGGGGGTGCAGGGCGGGGGGACGGCGCTG
GC
back to top