mRNA_D-mesarthrocarpus_Contig9358.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9358.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig9358.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: A0A7S3AW12_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AW12_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 1.520e-7
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKR 108
            D QEI   QG E+LRLFH++K+KT+ILDDF FY+KR
Sbjct:  419 DTQEILLEQGREMLRLFHQYKSKTSILDDFGFYDKR 454
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: A0A5C3NCF1_9AGAM (YTH-domain-containing protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NCF1_9AGAM)

HSP 1 Score: 54.7 bits (130), Expect = 2.090e-7
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKRAAQA-SMHYQQQ 141
            D QE+P   G+E+L++FH H A+T++L DFAFYE +A Q    H QQQ
Sbjct:  641 DTQELPPEAGMEMLKIFHTHPARTSLLQDFAFYELQAMQKIQAHMQQQ 688
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: A0A165TG49_9AGAM (YTH-domain-containing protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165TG49_9AGAM)

HSP 1 Score: 54.3 bits (129), Expect = 2.850e-7
Identity = 23/47 (48.94%), Postives = 33/47 (70.21%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKRAAQASMHYQQQ 141
            D QE+P   G+E+L++FH H A+T++L DFAFYE +A Q    + QQ
Sbjct:  639 DTQELPPEAGIEMLKIFHTHPARTSLLQDFAFYELQAMQKLQAHMQQ 685
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: A0A8J4R2K4_9ROSI (YTH domain-containing protein n=2 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4R2K4_9ROSI)

HSP 1 Score: 52.4 bits (124), Expect = 5.470e-7
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKR 108
            D QE+  PQGLE+L +F  H +KT+ILDDF FYE R
Sbjct:   83 DTQEVRVPQGLEMLNIFKNHVSKTSILDDFDFYESR 118
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: UPI001C4F9592 (YTH domain-containing protein ECT2-like isoform X1 n=4 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F9592)

HSP 1 Score: 53.1 bits (126), Expect = 7.290e-7
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKR 108
            D QE+ +PQG+E+L +F  H +KT+ILDDF FYE R
Sbjct:  493 DTQEVKSPQGIEMLNIFKNHSSKTSILDDFGFYEGR 528
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: UPI001CC7B5F5 (YTH domain-containing protein ECT4-like isoform X1 n=4 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC7B5F5)

HSP 1 Score: 53.1 bits (126), Expect = 7.290e-7
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKR 108
            D QE+ +PQG+E+L +F  H +KT+ILDDF FYE R
Sbjct:  506 DTQEVKSPQGIEMLNIFKNHSSKTSILDDFGFYEGR 541
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: A0A0M0J2Q8_9EUKA (Yth domain family protein 2-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J2Q8_9EUKA)

HSP 1 Score: 52.8 bits (125), Expect = 9.910e-7
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKR 108
            D QE+   QG E+L +FH H+++T+ILDDFAFY+KR
Sbjct:  186 DTQEVLPDQGREMLHIFHTHRSRTSILDDFAFYDKR 221
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: A0A067QEU0_9AGAM (YTH domain-containing protein n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067QEU0_9AGAM)

HSP 1 Score: 52.8 bits (125), Expect = 9.980e-7
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKRAAQASMHYQQ 138
            D QE+P   G E+LR+FH H A+T++L DFAFYE +A Q     QQ
Sbjct:  634 DTQELPPDAGQEMLRIFHTHPARTSLLQDFAFYELQAMQKIQASQQ 679
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: S7RTD4_GLOTA (YTH-domain-containing protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RTD4_GLOTA)

HSP 1 Score: 52.8 bits (125), Expect = 9.990e-7
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKRAAQ 117
            D QE+P   G+E+L++FH H A+T++L DFAFYE +A Q
Sbjct:  647 DTQELPPEAGMEMLKIFHTHPARTSLLQDFAFYELQAMQ 685
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BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Match: UPI00187CEE7C (YTH domain-containing protein ECT3-like n=1 Tax=Artibeus jamaicensis TaxID=9417 RepID=UPI00187CEE7C)

HSP 1 Score: 51.2 bits (121), Expect = 1.220e-6
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1 
Query:    1 DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKR 108
            D QE+   QGL++L++F  H +KT+ILDDFAFYE R
Sbjct:   97 DTQEVKLEQGLQMLKIFKEHVSKTSILDDFAFYENR 132
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9358.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3AW12_9EUKA1.520e-766.67Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A5C3NCF1_9AGAM2.090e-752.08YTH-domain-containing protein n=1 Tax=Heliocybe su... [more]
A0A165TG49_9AGAM2.850e-748.94YTH-domain-containing protein n=1 Tax=Neolentinus ... [more]
A0A8J4R2K4_9ROSI5.470e-761.11YTH domain-containing protein n=2 Tax=Castanea mol... [more]
UPI001C4F95927.290e-758.33YTH domain-containing protein ECT2-like isoform X1... [more]
UPI001CC7B5F57.290e-758.33YTH domain-containing protein ECT4-like isoform X1... [more]
A0A0M0J2Q8_9EUKA9.910e-758.33Yth domain family protein 2-like protein n=1 Tax=C... [more]
A0A067QEU0_9AGAM9.980e-752.17YTH domain-containing protein n=1 Tax=Jaapia argil... [more]
S7RTD4_GLOTA9.990e-753.85YTH-domain-containing protein n=1 Tax=Gloeophyllum... [more]
UPI00187CEE7C1.220e-658.33YTH domain-containing protein ECT3-like n=1 Tax=Ar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9358contigD-mesarthrocarpus_Contig9358:4300..4440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog104355.XP_007863003.1
PFAMsYTH
Model size141
Max annot lvl4751|Fungi
KEGG koko:K20102
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009894,GO:0010468,GO:0010608,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031329,GO:0043487,GO:0043488,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1903311
Exons1
Evalue1.64e-07
EggNOG OGsKOG1901@1|root,KOG1901@2759|Eukaryota,38CU9@33154|Opisthokonta,3NWV5@4751|Fungi,3UZZN@5204|Basidiomycota,227QW@155619|Agaricomycetes,3H2YN@355688|Agaricomycetes incertae sedis
DescriptionYTH-domain-containing protein
Cds size141
COG categoryS
BRITEko00000,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791089.7384586-CDS-D-mesarthrocarpus_Contig9358:4299..44401680791089.7384586-CDS-D-mesarthrocarpus_Contig9358:4299..4440Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9358 4300..4440 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9358.4.1prot_D-mesarthrocarpus_Contig9358.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9358 4300..4440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9358.4.1

>prot_D-mesarthrocarpus_Contig9358.4.1 ID=prot_D-mesarthrocarpus_Contig9358.4.1|Name=mRNA_D-mesarthrocarpus_Contig9358.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=47bp
DLQEIPAPQGLELLRLFHRHKAKTTILDDFAFYEKRAAQASMHYQQQ
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mRNA from alignment at D-mesarthrocarpus_Contig9358:4300..4440-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9358.4.1 ID=mRNA_D-mesarthrocarpus_Contig9358.4.1|Name=mRNA_D-mesarthrocarpus_Contig9358.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=141bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9358:4300..4440- (Discosporangium mesarthrocarpum MT17_79)
GACCTGCAGGAGATCCCCGCCCCCCAGGGTCTGGAACTCCTGCGCCTGTT
CCACCGTCACAAGGCAAAGACCACGATTCTGGATGACTTTGCCTTCTATG
AGAAGAGGGCTGCGCAGGCATCCATGCACTACCAGCAGCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9358:4300..4440-

>mRNA_D-mesarthrocarpus_Contig9358.4.1 ID=mRNA_D-mesarthrocarpus_Contig9358.4.1|Name=mRNA_D-mesarthrocarpus_Contig9358.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=141bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9358:4300..4440- (Discosporangium mesarthrocarpum MT17_79)
GACCTGCAGGAGATCCCCGCCCCCCAGGGTCTGGAACTCCTGCGCCTGTT
CCACCGTCACAAGGCAAAGACCACGATTCTGGATGACTTTGCCTTCTATG
AGAAGAGGGCTGCGCAGGCATCCATGCACTACCAGCAGCAG
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